XLOC_007598 (gene) - C. hemisphaerica

Overview
NameXLOC_007598
Unique NameXLOC_007598
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000170:387874..392967-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007598 ID=XLOC_007598|Name=XLOC_007598|organism=Clytia hemisphaerica|type=gene|length=5094bp|location=Sequence derived from alignment at sc0000170:387874..392967- (Clytia hemisphaerica)
CGTAGGTGTATTATGAGAAAAATATAAAAACCGAATTTAAAGATAACGTC AAATTGATTGGAATTGATATATCCCCATAACACACCTTAATTTCCACGTG ACCTTAATGGTATAAATAGTGGTTTTAAAATCAGTAATAAACATCGACTT CTGATACAAACAGTACCGGTTTTGAAGAAGCGAATCAAAGTCACCAACAA TTCTTTTGAGGTAAGTACCAAACAATTATATGTACAGTAGAGTCCTGTTA ACTCGATTCTCTATAACTCGAATGTCTCCTTAACTCGAATAGACTCCCCC TTCTCATAGACCCGGTGGGATTTTATCAGCCAGTGGGGGCAAAAATAACG GACCTCGATGGGGATTGATATATATTCCCATGTTTTTTATTGCTGGGGAT TTGAATTACATTGTTTTCTAGCCAGAAAATTCAGTGGGGATGTGCTTATG TGATTGTTTTCAACAGGGACAAAAATCAGAGTATAATTTTCCACAGGGAA CGATATTTTGGCCAATTTTTCAAGTGAAAAAGGTTCTTTGAGGAGGGGGT GTGAATAGCTTCTAGGATCCCTTCACTTAACAATGCCAAGGCTTACTCCA TAGCTCGAAGTTTCTTCAACTTGGATAAATTTGTGTTCCCCGTGCGTGTA CTTCACAGTAATATAAGTATTCCTCTGATTTTTCTCTTTTTTCAACTATG GAGATTCCTATCCAGCCTTCCCACATTCATTTTTCTAATTTTAATCTGTA TAAACACAATCATGGTCGAAATAGATTGAGATTTTAGTGTATTTTAACGT CTTTGAGAATCTAAAGTTCGGGCGAGGATTGCTATTTTAGCACTTCAACT TTCTTTCATTGAATATTTCGATTTTGGAGGGTTCGGTGGCTTCTTGGCTA TATTAAAAGCCTTATTGGAGCAAATTTGAGCTTTTAAATCCTGAGATCCT AAGGTCCTCCTAAGTCTCATGTCAGACTTAAAACTCTACTTTCCAATTGT AGTTTAACACGCTTAAAAATCATTTGTGGTGTTTGAAATTTCGCAGGGAA ATCCCCTTTAACTCAAATATTTTGTCTATGATTGCATTAACCCTTTCTTG AACCCAACTTTGTACCCAGAGCCACTTGCATCACTTTTTGATTTTACCTA AGGACGTTGGTACATTTGCTAGTGATGCTACGAAAATCATAGAAAGCGTA CTAAGAGAATGTGACCGAAATTTATTTGAATAATTGGAAAAATGTATGAG TTGACCCGGGCGAAGACACATTTATGAATCTGCGTCTTTCTGCAACTGAT ACGGCTAGCTTCTGATTTGTCTACCTAGATCGTGATTGGCTGGGGACGAT GGTTAATCAGCACTTTACCGTCCTCGATTTTTCGGGTCAAATTCCTTTAA GTCACTCTGCAATCCTCAAGAGTGCAAATACATGAACTCTCTATAGACTG ATTCCGTGTGACGTCATTTTCACCCACGATCAACCATTTTTTATTAGGAA TGGTAGAAAGAATATGTACAGGATGGTTTAGTAAAAATTTGATTACTCAA AGTCTTCAAATATTTCCCGTTTGGACCTGCACATAGTTTTTTTGTTTCGT GGGTGAAATTTATTTCAGTTAGAAACAGGCAGCTTGCTTGAGGTTTTGCT TGAAGATAGTCCCTAACTGGATTTAGCCGAATCGGTCTATTCACCAAAAA TCGGCTTTAAAATGTGAGTCAAGAAGCACTCTAAAATGCGAGTCAAGAAG GACTCTAAAATAAGAGTCAAAATATCAACTTGTTTATCTCTTTCATTTCT AGTTCGTAATGGATATGGCAAATATGAACGTAGGAGCAATGCTTTTCAAC AAAGAACTTCCTTTTGTTTGTGAATTAGATGGTGAAATTAATGGCCATAA ATTCTCAGTTAGAGGCAAAGGGATTGGAAACTCAGCTCAAGGATTGACGC ACGGTATTCATGTTTGTACGTCCGGCGAACTTCCCGTATCATGGACCGCT ATCACGCATAACCTTCAATATGGATTATTGTGAGTAAATTCTTCCAACTT CGTTCCCGTGTACCCAGACTTCTTCGACGTTACTAATGGGCCGGTGACAG AGAACATTATCTGGGTGCTATCAATAACCATCAAGACGCCAATAATACAC CAGGAACGAGGCTTTATTAATATTCCTTTGAATTTCTTAATAGTTTTCCG CCTAAAAAGTAGTCTGAATCGCAGACCTCTACAAAACCCCAGGTAGTATA GTCTATAAGGAGCACGAATCCGTTAGTAGATGCCAGCAGCCTACCTAAAA AGATGAAAAATAATTCCCTAAGATCACAGATACAACAGATAGACCAAATA TTACCAATGAGAAAATCTAAGACCTTATAGAAACTATATTGATGGATACG CCGCCTCGTTGCTAGCAAGCACCTTACCAATAACAATGGTACCAAACCCA TTGTCTAACTCTCAAGTTATAAGCTTTTATGCCAGTTTGAAGTTTTGGAT TTCAAAAAAAAGTCGAAAACGTTCTCACATTTTTTAATGTTGCACGCTGG AAAGGTTAATTCTCTTTTAGATGTTTTTCCCAATACCCTCATGACATCAA TGATTACATCAAAAGTACCTTCCCTGAAGGCTATACCAAAGAACGTACCT CTAATTTCGATGGGGACGGCAAATATACATCACGTCACGTCATTACATAC GAAAACGGCTGTATTTACAATCGCGTAACGATCAACGGATCTGGATTCAG CGATGATGGAAATGTTCTTGGTAAAAATCTAGCTGATTATGAAAAACCAG TCTGTTCCATGTACTTCCCTGGAAAAGATGGCTTGAGAGCCGAAATTTGT AAGGTAAAATATTTTTACGGCTGGCTCCATTAAGGGATATTATGTATTAA AGGATGTCATTAAACGTTCCCTCGCTGCATATGATGATGAGCACGCCAAA AAATAATATCTTTAACAAAGATTTCGAATCCTTTTCTCTTACGATTTAAT GTAATTTCCAAGAGAGAAAGAGTCGAGTAAATTAACTCTGACTGGCTAAA TCAACAGTTAGACCAAACAGAATATAAATTTTGATAAAATTCAGAAAAGA TTGTAGTTTGTGCGCGTTGAAAAGATAATTCTTGAGTGGAATCTAATCAA ATAGAAATTTTTTCTCATGAAGATAAAATTGATAAAGCAACATTTTGCTT CACCGGGTTTTAATCCCCTCTTTTGGTGGAGAACCATCACTAGACAATGA AATTCATTATAATAATTTATATATTTTTGAATTATTTACAGTTAACAGAA ACTAAAGACGGGGGTTACCAATCCTGTCGATTGGAAGATCAAGTAATCAG ACCTATTTCACAAGGTCCCACAGTTCCGATGACTCATCACTATAACTACA GCTCCGTAGAATATAGCAAAGATGCCAATGAAACAAGAGACCATATTGTC ATGAAAGAAATCACCAAAGTCAGCCACTTCATTCAATAACTGACATATTA TTAGATTGAGGAGATTTGGAGCAAGGTTATCATTAAAATCAATGCAATTT TTAAAACTAATGTAATTTTTGTGTAGTTTTGTAATTTTCTTGCACACTTT TTTGTAATCTTTGCGGCAGTTTTGTATTTTTCTGCGCACTTTTGTTATTT TTGAGCTGCGAATAATTAATTAAAATAACATAATTAGAGTGGTTTATCAG CTCCCTAGCGTAAATATTTGTTGTAGCTCAGTAAATCGAGTTAATGCGAG TTATATACCCTGAGTATCAGAGGTTAAGTTTTCAAAGAAAATAGTAACTC TGAAGACAAATAATAGAAATTTTATCGCGCATGTGTCAATCTAATCACTG TAGAAAAAATCAAAGATGGAGAGCAAATATTACCATATTAATGTCTAGCN TATAAGCTTTGAAATGGGGCCTGGTTAGTTTCAAAGTTCTTTTTTTCAAG TTTTAGTGTCTTTTTTAGAAAATGAATCAACTATTACAAAGAATACGTGA TGTGTGACGATTTAGAATAAATTATCTTAAAATTCCGAGTTAAAAGATTT ATAACTCGGGATTGCGTTTAAGTTCTGGTTGCTAGGAANGCTGCATATGA TGATGAGCACGCCAAAAAATAATATCTTTAACAAAGATTTCGAATCCTTT TCTCTTACGATTTAATGTAATTTCCAAGAGAGAAAGAGTCGAGTAAATTA ACTCTGACTGGCTAAATCAACAGTTAGACCAAACAGAATATAAATTTTGA TAAAATTCAGAAAAGATTGTAGTTTGTGCGCGTTGAAAAGATAATTCTTG AGTGGAATCTAATCAAATAGAAATTTTTTCTCATGAAGATAAAATTGATA AAGCAACATTTTGCTTCACCGGGTTTTAATCCCCTCTTTTGGTGGAGAAC CATCACTAGACAATGAAATTCATTATAATAATTTATATATTTTTGAATTA TTTACAGTTAACAGAAACTAAAGACGGGGGTTACCAATCCTGTCGATTGG AAGATCAAGTAATCAGACCTATTTCACAAGGTCCCACAGTTCCGATGACT CATCACTATAACTACAGCTCCGTAGAATATAGCAAAGATGCCAATGAAAC AAGAGACCATATTGTCATGAAAGAAATCACCAAAGTCAGCCACTTCATTC AATAACTGACATATTATTAGATTGAGGAGATTTGGAGTAAGGTTATCACT AAAATCAATGCAATTTTTAAAACTAATGTAATTTTTGTGTAGTTTTGTAA TTTTCTTGCACACTTTTTTGTAATCTTTGCGGCAGTTTTGTATTTTTCTG CGCACTTTTGTTATTTTTGAGCTGCGAATAATTAATTAAAATAACATAAT TAGAGTGGTTTATCAGCTCCCTAGCGTAAATATTTGTTGTAGCTCAGTAA ATCGAGTTAATGCGAGTTATAAGCTTTGAAATGGGGCCTGGTTAGTTTCA AAGTTCTTTTTTTCAAGTTTTAGTGTCTTTTTTAGAAAATGAATCAACTA TTACAAAGAATACGTGATGTGTGACGATTTAGAATAAATTATCTTAAAAT TCCGAGTTAAAAGATTTATAACTCGGGATTACGTTTAAGTTCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013615TCONS_00013615Clytia hemisphaericatranscript
TCONS_00013614TCONS_00013614Clytia hemisphaericatranscript
TCONS_00013613TCONS_00013613Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
green fluorescent proteinTCONS_00013614-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000170supercontigsc0000170:387874..392967 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.05 3.16 1.89 2.15 3.81 2.37 1.9 2.06 2.85 1.45 1.73 1.42 1.54 1.02 0 0.03 0.07 0.11 0.15 0.05 17.4 12.96 465.13 554.17 861.42 485.57 0.89 0.47 0.1 0.31