XLOC_007821 (gene) - C. hemisphaerica

Overview
NameXLOC_007821
Unique NameXLOC_007821
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000175:402976..408675-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_007821 ID=XLOC_007821|Name=XLOC_007821|organism=Clytia hemisphaerica|type=gene|length=5700bp|location=Sequence derived from alignment at sc0000175:402976..408675- (Clytia hemisphaerica)
TAGCAAACTAAAATAAAACATATCAATCATTTTCGAATCGTATAAAATTC AAAATGGCGGATTCAATATGCTGCGTGATTGCCGATAAAAAGAATGTCAA AAAAATCAAGTAAGTCACTTTATAACTATAGTTATCATAGTTATCCAGTC TCGGCTGAAATGTTTAACGTATTGTCTTTTCAGTTTTCAGTTTCAGTTTT AATTATCTGTTTCCGAACTCTGTAAGAATTTGGTTCAGTGGTTCTCAAGT CACAAGCTTTTGAAGTCAAAATTCACCTTTGAAAAAGTCCAAAAACACGT CAAAAAAGGGGTATCAAATTCAGCATTTCTTAACATTCTTCACTAAAAAC TTTTTTGAAAATTCGTTCAGAATTACTATTTTCCTGTTTTTCACCATAAC TTTTGTTAGGATGATTAAGAAAATGAGCTTAAAAATAGTGAAATTATGAG GTTTTCTGCATAGAATTGCGTTAATTTGACACCCCATTTTTGACGTATTT TTGGACTTTTTCAACAGTAAATTTTGACTTCTAAAGCTTATAACTTGAGA GCCACTGGACCAAATTTAAAATGTTATATACCAAATTTTAATTTTCAAAA GAATTACAATGACAAAGGAATTCATTAAAAGTTCACATTACTTCGGACAA AGTTAGCCATCAAACCTTTTATACTTTTTTCTGGGTCACCCGGTAGTTTG AAAATGAGGTAAGCGTTGCTCGTGACGTAATTTATGATAAAGGTCTTTTG TTATCATGAGACGAATGATTTTTTTTTTCTTTTCATTCTAGACAAGAATT GGAAAAGAGGAACATTCTACACTCCAAATATCGTATCACGAAAATGGACC CTAACACCTGTGCTATACCTGTCTCTACTGACAAGTGTTCTGTTGAAAAT AATCTGCAGACTGATCTCTTGCCATCTTTCAAGGAACAACAGGCGGTTCA ATATTTGAACGCTGATGAATTGCTCTGTAGTAAGGTTATAACGCCTCGCG ATGCCCTCGTTCAAAAATTGGAAGGTTTTTTTAAGACAAAAACTGAGATT TGTGAAAATGAGAGGAATCGAATATTACAGCAAGTTCCACATAAATGGGA AATCCATGGAGATATGTTATTATTACCAAGGGATTGTTTAACAAATGCAT TCTGGGAAACTGGGCAGAAAGAATTATGGGAAATATTTGCTAAAGTCTTG AAAGTGAAACGTGTGGCTGTTATGTCTCGCGTTCAGGATAATATGATTCG AACGCCAAAAGTCGCCCTTAAGCTAGGGGCGGACGGATGGGTCAAACACG TGGATAATGAGATAATTTATTCGTATGACGTCACAAAATGTATGTTTTCA AAAGGCAACATTACGGAGAAAATGAGGATCGCGCGGCTTGATTGTCGAGA AGAAATTGTCGTTGATCTATTTGCAGGTAAGATGTCATTCATACTTTCGG AGGCCTCGTATGATAAAGATAGACCAATTAAAACTCAAAATGTTAACCAT CATTAATTTTCTTTATTTCAACGAGGTTAACTTCTTTAGGGTAACGGACC CCCGTTTGTTAATTTTTCGACTATTAGGATAAGACCTAGCGAGTACCTCA CTAAAAACCGGGATTTTTCATCTCGTTTCTTGGTGAGTTCCACTTTGACG ATTTTCTAAAAATAGAAGCCTTTCAAGTGCTTTGACGCAAATTCGATTTT TTCGCTCTGCAGGAGCTTCGAAATTTAAAAGTGACGTCAAGAAATCGAAT GTTTAGAGCCCGAAAACCCGGGCTCAAAACATTCGAAAAAGTTGCAAAGT GGAATAGACGCGGGTGGCGTCTAGTATAGGCTAGATAAGACCTTATTAGG AACCCCCGTTTCTTATTCTTCGAAAATATTTGCAGCTGTCCAAAGAAGAT TCCCTTACTTTGCTCTAAAAAGCCAGGTTTTAATCTATATTTACCTTTTT TTTTGGGGGGGGGGTGTATTTATAGGTACGATTCAAACCCCCTGCTAATT GAGTCTCCCATTATTAAAACTTGAAGAGAAGAGAAGATATTTCCAACCGT AGGTAGTAAAACAAATGTGGATCAGGTAGATAAAGATACTCAGGAAACTC ACTTTTACCTTCTTTACTATGCAGTGTGTATTATAAAGTATAATCCTCAA AACTCATCTTAACTGGGCTTAGAAGTCGGGGGCTTCCGAGGGTACAAAAT ACCAGAATACCGGTAATTTTCTCGTCCTCTACCGAAATACCAGTAAATGT TTCTGTAAATACCGGTACTGGCAGGTATCTTAAATACCGGAATACCGGTA ATTGTTCTGGCCAATACCGGAAGAAAATAGGCCCAATACCGGTAAATACC GGGTTCTCGGAAGCCTCTTTCCCCTTAGAATAATTGAAATAATAATTTCG CATACATTTATAAGGATTTTACTTTAATGAAAATATTTGTCCAATTTACC TTTTTTTTGGGGGGGGGGTGTATTTATAGGTACGATTCAAACCCCCTGCT AATTGAGTCTCCCATTATTAAAACTTGAAGAGAAGATTTTTCCAACCGCA TACCTCCGTTCATCAGGCACCTGAGTGTAGGTAGTAAAACAAATGTGAGG ACAAATGAAGATACTCAGGAAACTGACTTATACCTTCTTTACTATAATGT TCGTTCTCTCTAATTCGATCTTCAAGGGATCAAAATTTTTCTTTTTATTA GAAAAAGATTGGAAATATGGAGAGTATTTTATACAACTCTTCAACTGAAA GGAGCGAGATTTTAGTTCGAATTACAGAAAGATTTGAATAATAGATGTTC GAATTAAGGAGAGCTGACTATGTATTACCGTGATTTTTTTCTTCGTTTTC CTCACTTTAGGTATTGGCTACTTCACTCTTCCATATTTGGTCAAAGCACA AGCCAAGAAATTATACGCGTGTGAAATCAACCCTGACGCATGCGCAGCTC TTAAAAAGAATCTGGGTTTGAATCACGTGGACGAAAGTCGGTACCAGATC CTTCAAGGTGATAATAGAGAGGTCAGTAACGTTCTTTTTTGGAACTACCT CGGAGGTCCTTTAAATTAACCGATGTTAGTCCGTTCGTTCGTCTGTTATT AGTTTTTCTCGGGATCGGCTCGTTAGTTTTTTCTGATTTTTTTGCACAGT GATACAAAATGGTGATTCCCAAAAAAGTGACGGAGCCCGATTTTCGAAAA AAAGAATATGCCGGAAATATGCCGGTAAAACCGGTTTTTTGGCATTGTCT CGAGATTTCATCGTGATTTTTTGCACAAAGATGCATATTAGCAATGTCCA ACTAACTTTCATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTTTAAA GAAAAAAATTAGCAAGTTTACATACATCATTTCTTTGGATAAGAAGGTCT ATCAGTTACCATAAGCGGATTAATTTTTGCGAATTTTGAAAATGTTCCCT AAAATTTAATTAGTCATCGTGAAAAATTTTAGATACGAATTTCGACCCTT AGGAAAATGGAAAATTTGGTGAAAAATAGTCCGATTTGCGAATTTTTGTC CACGTCAAAAATTTAGATTCTCAATTTCGCGAAAAAAGGTAATGTGAAAA TTAATCCAGTTAAAGTACTCTGAAATTACAATAGCAAGTTTCTACATCTA CGTTATGACGTTCATGACGGAGCTTTGACTCAAACGAATTTAGAGCAATC CGTTCTTTTAGCGTCATCTTTAGTTATCTAAACCTTCCAGACGCAAAAAT TTTCATCCGACACGCTAAAGCTCTGAAGGTTGAGAAAATCCTCAACATCT GGAAGGTTTAGATTACGGAATTTTGCAGCGGGAGGCCTGTTAACCCAGCC CTGGTTTTCGCGGATGGTAGGTCCAACTGAAATATTTTCAGGTTTACACG CGAGGGCTGTTGAACCCGGCTGAAGATGCGGCATATCAAAGGCCGACTAT CATTTCCTCTCCGATGGGAAGTTGACACCTATCCTTTAGAGCTTTAGCGT GGGCGGCCGCCAATCCGCCATCAGAATATCAGATAACATTTTTAGCCTAC ATGGCTTACGCATAGATAAAGGAAGCGAAAATACATTTGATATTTTAAAA GGGCGCTCTTCTATTCGATACGCTCCCTTTGGTGAAAAATCCAATTTCCC TTAAAAATCGAATGGGAGAGTGCCAACTGTAGTTCTTTTCGTGATTGGTC TTGCTTTTAAATTTTCCAAAATTATACCAATAGACCTTTTCATAGATTAC GTCACGAACATCACTTGCCTCGTATTCAAACAAATACCATGGTGATTATG TCTCTTGAGACATTAAATAATTTTTTTATGATTAGGAAGTAGTTTTAATA AAATCCGCTGGGAGTTAATCACCGTGGCATTAATTTCAAAACGAGGCAAG TGATGTTCGTAACGTAGTTTATGAAAAGGTCTACATGTTTTTTCTTTTAT AAGCATAACGTTTATAAGCATATGCAGGCTCAGTTTTTGGTACCTAAACA ATGGCTCTATTGTTTGAGAACAATAGAATGCTAAGCATAATGCCAGCCTG GAATTGGGACAGATACTTGCTTATAAAAAAAACATGTATTAACCTAATTC TGATTGCGTCTTGCTAAATCTTCCAACACCAAAACTTTCCCTTTTAAATC AAGCTCAGCCAAAACTTTACAAAAGATGTATTTTCTTATTCTAGGTATGT CCAAAGAACATTGCAGATCGTGTTAACCTTGGTCTTATCCCAAGCTCTTC ACTCTCATGGGCGACCGCCTGTCACGCCCTTAATCAAGCGAAGGGCGGGT GGCTACATATTCATGAGAATGTCGATAGTGGTGCAAACGCTCTGGATAGT GGTACAGGTAGTGATGCTATTCTTCAAGATCATATTACGAATGCAGGAGA ATTTGAGATATGTCAACATGTTGTGAAAACAGAATTTGTGCCGTGTCGCG ATGGACTTGACGTAACGGATTCGGAACCTCCTGAAGATATAGAGTTGGAA ACGTCGACATTGTCTGAGAAGAATAAAGCAGGACCCTTAGATACAGAAGT TGTCAACAAAGAAAGGGATTTATCGATAACGTATGAAAAATCTAAAGGTA TGAGCGTAGATAATTATGTGTTTCCTGAATGCAACGACTTGGAAAGGGAA AATCGAAACTTAGTACGAGATTGCTACAAAGGAAAGCTCTCAAAGCATAA GTGTGTGGTATGGCAGGCATTTGTCGATGACATGTTGTCGAAATTGAAAT CCTATTTGCCGCCATTATGGAAAGTAACATTACGTCATATAGAGTTTGTA AAATCTTATGCGCCCCATGTTGATCATTTAGTTTTTGATATTGAATGTCG ACCAATCAGTGATCAGCTATTGTGAGCGTAAAGACCACGTGGTTTTATCT GTTGTTTTTATTTTGCAGATGGAGTACAGAATGTTGAACGATTAGTGATT AATACCCATATTAAAATTCTTTGATCTAAATCGATCTTCTGCCCGAGCAG TCCCTAGGTAAAATTTCACTTCGGAGCAAAACGGTATCATATTGTGTTCT GTTGTAGTTTTATTAATTGGGCCCTTCCATTTTATATCCATACAGGGAGG GGTGGACGAACATTTAAATGGGGGTTAAAAATGTATTCTAATAATTTCAT GGGGTAAAAGACCGGTTTTAGTCTAATTTAAGGTCTAATTTAATTTTCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00013998TCONS_00013998Clytia hemisphaericatranscript
TCONS_00013997TCONS_00013997Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00013998-proteinTCONS_00013998-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000175supercontigsc0000175:402976..408675 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.4 1.95 1.11 0.69 2.37 2.11 2.03 2.81 2.13 3.04 3.55 2.08 1.74 1.95 1.42 1.98 1.62 2.08 0.9 0.86 1.25 1.6 4.86 4.44 4.34 4.83 0.52 0.29 3.03 3.54