XLOC_008000 (gene) - C. hemisphaerica

Overview
NameXLOC_008000
Unique NameXLOC_008000
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000185:210050..218714-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008000 ID=XLOC_008000|Name=XLOC_008000|organism=Clytia hemisphaerica|type=gene|length=8665bp|location=Sequence derived from alignment at sc0000185:210050..218714- (Clytia hemisphaerica)
TTCTTTTTTGGAAAAGAGCTTAGATGGCAGGCTTGCCAATTGCAGGTGTA TTGTAGCCATATTTTCAGGTTTATTCTGCCATAAATGGTTGAGAAATATG TTGGAAACTCATGATTTATAAGTTTGGGCAAGCATAATTATGAATCTCCT GACTAGTTACTTAACCAATAAAATACTTTTTATATGCCCTGTTTAGCTAG CCTATATCTTGTTAACTTATCATAGCTATTTTCACTGCTTTAGTCGATGT TATGGAAGATCAAAAAGAAGTTGCTGATCAGGCAGATTCTCTCGATGTCA TTGTAAGCTTTCAATTTTTGTAATTTTACCTTGTTACTGACATCATTTTG ATTATATATTGTGATTCGAAGGTTATAGAATTTTATAAGATATGATGATT TATTTGGTCTAATTTCTAACTGTAATTATTATACTTTTTTAAGAATTCAC TTGTTGATAATGTTGAAACTGCACAAAATGAAAGACCGATTATTGATGAT TCCTCAGGTAAATTTTTTATTCTTTAAAAAAAGACAAAACAAGGACAATA AATTAATTGACAAATCTCTTACTTATCAATCTCTTACTATATGATATTGA ATACATTTTTATTTATTTCTCATAATAGCGCAAACAATCTTTTCTACAAT GGAAAACCTCAAAAAGTGTGCAGAAATTGTTGCAATAGAGGAAGAAATTA CAAAAGTTCTTCGAAAAAGTTTATTTGATAAAGCTAACTGCATAACTGAC ATTGAAGATAGTCTTCTTGAACTTGCTGCACAAGGAGTTTGTGATGGTAA AAATATTCCCTTTTCGATTTGTCAGGTGTTAAGTGGCTTCACAGCTATAT TCTTAGCCTTATTAGAAATTTTTCGAGCTTTAAGATCCTAAGGTTGTAAG CCTTAGGTCTCATGTTAAAACTCTACTTTCCAACTGTATTTTAAAGCACT TAAAAATCATTTGCGGTTTTCAAATTTTGAGGGAAATATTGCCAAATATT ATGGTGGGGATTGTAGCTATTATTTAATATTGCTATTTTTAAGCTGTTTG AGCTCTTTTTCTCGCTAACCTCTTGTCTAATTTCTCATCAACAAGATAAT TTACTTTCAAATCACAATTTCAAAGATTAAAAAATTTCTTTTCAATTTTA TATAATGTCACTTTTAATTTTAAAACTTAAACTTTTATCAACAGGTATCT ACTACACTACCATAACAAAGCTCGAGAATGAAGTTTATGTAGCAAGATAT TTCAATTTTGGTACATTTGATAGGCTTCATCCAACTTGCATGGAAAAAGC TAAAATGGAATTAGAATTACCAGATGATGTTTTCGAATATGAGGTCTATA CTGAAAAAGATATTCAAGTTGAGAGAACAAGACACAATGCCCAGTATGCA TCTACTCGAAAAGGTATGCTATCAAATATTTTCTGAGCTGAATAGCCTGA GTATTAGAATATTAGATTTGATTCTATTTAAGAATAATTTAATTTCATTT AAGAATCAATTGAGGATTTTTGTCTAATCTTTGATCTTCAAATGATGTAT GTGATGCGTATGATGTGTATGCAACTTCTTTTAATAACTGTGATTGTTTC TCACCAGGACAAAAAACTGCTACCTACCAACTATTTTTCAACAAAATTTA TGTACGAAAGAAGGGTATACAGACAAGCATGAAGAATTTGATTGATGAAA TGAATATCCCTGACTCGAAAGTAAACAATCCTTCATCCAAACTGATATTT GCTGTATGTTGTTTAACAAAAAAAGACTTTGTTTACAACCCACTTGGGAA CGAAAAAACCAGGTAATTATATTCAATTTTCAAGTAATTACTAAGAATTA GTTGATTTGAAATACTCTTTGAACTATTGAAATTTGTGTGGATTGGATTA GATGGTTTTCATTTTTGTTTTAGTACCCTATTACAGTCAATATGTGAAGT AAAAATGTTTTTATCAATTTGTTTTTTGAAGATTCTTCATGTCAACATCG AACAATCATTGGGAAACTCCATTCCAAACATTGAATTATCCTGTCCAAAA CAAGATAGATTTAAAAACTGATACACATGGTATCCTATCCTTAGTTCAAC AACAACGTTATATCAATAGTCTGCCGAATCATCATAAATGGCCTTTCCCT GGTGTGGATTCCTCCAAACTGAAATATGAACAACGTTTTTCGACATCTAC GCGGTATCATCCTGGCTCACCTCGAAATAGAATACTTCAGGCTTGGAGCC ACTATCGGCAAGATTCTGATGATGTGATATTTGACGTTCTGTACAACATA TTTTTTGACCAGATTCCTCTGCGATACATGAACAGAAGAGAGAGAAAATC TGCTCGACATGAGAATAAAGGAAAGGGAAGCAGGAAACGTGCTCATAAAG ATGCATTCGACAAGAAAGTGAGTGTTTTTTTAATCGAGTTTATAATTCAC ACTTACAATTCACAGCACCTGATATTACTGTGAATTGTAAGTTCAAATGN TAATATCAGGTGCAAAGTTCAAATGTTTATGGAGTATTTCAGCTTTTATG AATACTCACCAGAAAATGTCTTTAAAAAGAATAATCTTTTTGTTTCAGAC AGACATTGATGATGAAACTGAAAATGACGTTGAACCTCAAAATGATGTTG AACCTCAAAATGACGAACTTCTTCGAAACACTAACGACAACGAGGTAAGT TTAATTTGTTTAAAATACAGTAGATTTTCTAGCTTTTTTCTCAAAAATGT GTCTTTGTTATGATCATTATGTCTTAGCCATAAACAACAACACAAAAACA AATTTTCCATCATTTAGGACNGTTTGTTTAATAAGTCAATAGCAAGACAT AGTCGAACGAACTTGACAGGAGTAATGTTAATTTTTATTTTTAAACATGT TTCGATATATTAATATCATCATCAGTAANNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTATTAAAAGTGCAA GTAAAATGATAAAATGAGACGAAGTATAAGGACAAAATCAAAATAATCAA ACTATCAAATTAACTTTTCAACGTTTTCTGGATATTCAGGACACCTCTTA AACGTTCATTCCATAAGTACTCCCTTTCAGACAAAGAGTACTTTGAATTT GTGATTCATTTTATTTAGTTTGTTTAAAATACAGTAGATTTTCTAGCTTT TTTCGCAAAACTTTTAGTTATAAATGTGTCTTTGTTATGATCATTATGTC TTAGCCATAAACAACAACACAAAAACAAATTTTCCATCATTTAGGACCAG TCATCAAATAACCAATTACCCTCAGATCTCGGAAATGATGTTGATGGCCA GGACTCATCTATGCAAAATGTTGAGAAACCAGTTCAGGTTTGTTACTTGT GTTATGTATAATTTGTGATTCATTTTATTTTAGCGATGAGACGGTGTTTC ACCAGATAAGCGCAGCTAGCTGTACGAATTTCTTACATTCTGTTCGCTCT TTTAGGCTTATCTTTGGACGAAGAGAACCGAATTGTACGAGTTTTACTGC CAGTTGCTTTTCAATCATGGCGAAATTATTTGGAGAAAACCCCGTGGATG TCAACAACATGTCGTAATGAACAACTATGAGTCTTTAACTGGAGATTTTA AAGTAAGTTACGATGATAAGATAACACAATGTTCATCTGTTTATGAACAA TGGAATTAAAAGGGTCGCCATTGAATGAAAAAATCAAGTGAAACTTTGAA ATGAAATCAACGTTACAGTTTATAGATAGGATTAGGTGATGCTGATCTGA AATATGTACAAGTGATAGATTTGATATTCGTGATAAAACAAATAATATTA AAAGTACTCTCGCTTTTTTATTTAGAATTACGCATTTTGTACAGTAACGG CCACAACAATAACGGAAAATTGTGTATCAGTCGAATGTGATTGTCAAGCA TTTTCGTACAGCTCAATAAGACGTCCTGACAATCCTTCATGCTTGCATAG CCGTTTGTACCTAGATATCCTTAGTGTTTTGAAAGGTGAAGAAACACCAC GATATATCAGGAAGGACAAAATTGAACTTGCGATGTCAAAAGCAGAGGAA ATCATAATCAAACTTGCGTCGAAAGATGGCGTTGACCGGTTTTCAATAAA TGGGGAAACACATACTGCTGAAGTTACACTAACGCACATTTCTCAGACGA CACGAAGCACTGTTACTTGTCACTCCGCAATATGTCGTATGAGCGATGGT TTTACGAGACGAGTGAAGTATCTCGAATCTAAAGAAATAAGATTATGCGA GCATTTAAAACTATTTCGTGAAGTGTATCTTAATCACGTTAAAAATGGTG AAGAAATCCCAGATGATTTATTAGATGTTGACGACACAGAAATTGCTGCA ACCTTGCCACAAGAAAAAGTATTCTTCTCTTTCTTATTAAAAACTTTCTG CTCGCAACTGCTGGAAACTCGAAATTTATTTCGAGCACAATCTCGAGATT TTATCGGTCTTTTGAGAAGATGTTAGTCTGCATTACCTCTCCCTGAGATG ATGATCCTAAATTAAGCAAATACCTATACCGTTTCATTATATCTTACTTT TGTAATGATAATTGATTTGCAATAAACGGAAGTTTTGCCTTATTTTTACA GTGGGCGGATGTCTTTAACGAAGAGACCGGTCAATGGAAGTTTTCACCAA AGAGTATCAGCCAGCGAATTGTTGATAATGATCCCTTTTCAGAACAGCTA GCCAGAAACCTGAACGCAAGGGATTCTCACAACAATCTTTATCCTGAACT TCCATCTGATTCTTGTGAATGTGGCGTAAGTAGTCTTTAGCCAGAAATAT TTACGTTCTAGTCTCTCTCTTGTTTCGGAGTTTCGAATCATCAATTTTGC ATTCTTCTCCCGCTATTAAGTATGCAGCATACAGCATTCAGTATGAAATT ATGTTGAACAAGTAGATAGTATAATAATAAGGCATGTATACATTTATATC ACGGCTAGAAGTATTCACTTGATTAAAGAACATTGCATAAATGAAAAAAA TACTCACTTTTACAGGCTGGTTGGACTTCAGATTGCTCCCCACCAGATGG TTTGTTTAAACGGTCTTTCCGGTTGAAACTTTATCTTGGAGATAAAGTTA TCGACTCCCAAGTCTTTGATCGTACATGTGTTAAGGGCACTTGTGTCAGA CGATATGACGGTGCTGAAAATTCGATTTTCTGTTTGTCAAAAAGCACTGC TGTTGGATATGAAATTGGTATGTTTTATTCACTTTATTGTTGCTTTACAA TCTGCATTTTTTGAATGTCAATTAGCCTATAGTTGTGGAGAAATCATAGT TACAATTCTCTCTTTATATCAACTCTACAGGTTGGGAGTTTGTAGATGCT GTAATGACGTCGAAGCAAACTTTCCGAGGATTCATCACTGTCGTTCAAAA CCGCTACCTTCGTTACAAAAGGAACTGCGAGTTTCTTTCAATCAATACAT TCATTGAATTCTTTTTTGCTTGGGCTTCAAGAATGAATCTTGAATTCCGT GAATCTTGTTCTGGTTGCGAAGGATCACCAACAGTCTTAGCTTGTGATGG AACAAAGCTTGGTATCAATTTTCGCAATACCTTCGTCTCTCCGATCGAAA CTCCTTCTTATTCCGTTTCAACAGATTTCGTACAAACTCGAAGACATGAT AGGTGCTTCATAGTGAACCAAGGTAACACTGTTGAAGACAAAAGAAAATA TGCCCGTCTTCGTCTTCACCTGAAAAGTTATTGCGAAGGATTAATCAAGG CTTTGCCTTATGTTCAGACCGACATGGACCTTTTAAAAGAGATCCTTCCT TCGACATGCCATCCATCATTTGATGCTATGGTATGCGTTGAAACCAACCC CATACATCGCAAAGCATTAGCTCTCGTTTATAGAATGCTTGCGTTCGACT CTGCCGTCGATTCAATTTTACCATTTGATGTGTGTCAAGGTTTGTTATCG GATATTGACGACTACGAAAAAACATNTCTTATTAAAAACTTTCTGCTCGC AACTGCTGGAAACTCGAAATTAATTTCGAGAACAATCTCGAGATTTTATC AGTCTTTTGAGAAGATGTTAGTCTGCATTACCTCTCCCTGAGATGATGAT ACTAAATTAAGCAAATACCTATACCGTTTCATTATATCTTACTTTTGTAA TGATAATTGATTTGCGATAAACGGAAGTTTTACCTTATTTTTACAGTGGG CGGATGTCTTTAACGAAGAGACCGGTCAATGGAAGTTTTCACCAAAGAGT ATCAGCCAGCGAATTGTTGATAATGATCCCTTTTCAGAACAGCTAGCCAG AAACCTGAACGCAAGGGATTCTCACAACAATCTTTATCCTGAACTTCCAT CTGATTCTTGTGAATGTGGCGTAAGTAGTCTTTAGCCAGAAATATTTACG TTCTAGTCTCTCTCTTGTTTCGGAGTTTCGAATCATCAATTTTGCATTCT TCTCCCGCTATTAAGTATGCAGCATACAGCATTCAGTATGAAATTATGTT GAACAAGTAGATAGTATAATAATAAGGCATGTATACATTTATATCACGGC TAGAAGTATTCACTTGATTAAAGAACATTGCATAAATGAAAAAAATACTC ACTTTTACAGGCTGGTTGGACTTCAGATTGCTCCCCACCAGATGGTTTGT TTAAACGGTCTTTCCGGTTGAAACTTTATCTTGGAGATAAAGTTATCGAC TCCCAAGTCTTTGATCGTACATGTGTTAAGGGCACTTGTGTCAGACGATA TGACGGTGCTGAAAATTCGATTTTCTGTTTGTCAAAAAGCACTGCTGTTG GATATGAAATTGGTATGTTTTATTCACTTTATTGTTGCTTTACAATCTGC ATTTTTTGAATGTCAATTAGCCTATAGTTGTGGAGAAATCATAGTTACAA TTCTCTCTTTATATCAACTCTACAGGTTGGGAGTTTGTAGATGCTGTAAT GACGTCGAAGCAAACTTTCCGAGGATTCATCACTGTCGTTCAAAACCGCT ACCTTCGTTACAAAAGGAACTGCGAGTTTCTTTCAATCAATACATTCATT GAATTCTTTTTTGCTTGGGCTTCAAGAATGAATCTTGAATTCCGTGAATC TTGTTCTGGTTGCGAAGGATCACCAACAGTCTTAGCTTGTGATGGAACAA AGCTTGGTATCAATTTTCGCAATACCTTCGTCTCTCCGATCGAAACTCCT TCTTATTCCGTTTCAACAGATTTCGTACAAACTCGAAGACATGATAGGTG CTTCATAGTGAACCAAGGTAACACTGTTGAAGACAAAAGAAAATATGCCC GTCTTCGTCTTCACCTGAAAAGTTATTGCGAAGGATTAATCAAGGCTTTG CCTTATGTTCAGACCGACATGGACCTTTTAAAAGAGATCCTTCCTTCGAC ATGCCATCCATCATTTGATGCTATGGTATGCGTTGAAACCAACCCCATAC ATCGCAAAGCATTAGCTCTCGTTTATAGAATGCTTGCGTTCGACTCTGCC GTCGATTCAATTTTACCATTTGATGTGTGTCAAGGTTTGTTATCGGATAT TGACGACTACGAAAAAACATCCGAAATTATTAAATCAATGCGTGAGTATT CTTACGAACTTTCACAGCTATTAATGGTAACGTTAGGTTCGGAACAGTTT CCTCATGCTGTAAGCTTGATCAAATGTATTGCTGGTCATGTGATCAAGGC ACATGAGAATGACATTGAACCTGAACCAGCACAGCCTATTGATGGAAGTT ACAACCCTCCAAAATATGGTCGTGCGTATTACTTTAACGCTGATGGAAAG CAACTCCGGCGTCTTCGAAAGTTTCCCGTAGACGACACCGACACTGGAAA CTATGACAATGCGCCAGATATCGTGTGCGAAAAGAGGTTTCCTCAGGTGT CAAAGAAAGGAACATCGTATCTTTTTCTCTGGTTCTGCCCTAACCACGGC CACTGTTGGGGATACCATATCATCCCTGGTTCAGAGGGAAGGAAGGATCC AGCAGCTTCCCTCTATATGTTTTTGGAAAAGGCTCCTAAATGGTTATTTT ATGATTTTGCCTGCAGTCTGTCAGAGTACAACCACAACAGAGAAGCAGGG TTCTACTGCTGTACCCGGTTTTACCATGACATTTTGCATGGTTTCACCCA TAAATGCAGCAACTCGTTCCGGTGTGACAAGCTTGCTGGTATGTCGTCCG TGAATAGTTCGATTTGTGAACAGTTTAATGCTTACATAAAACGCATTAAA ACTTCGGCAACATTAATGTCACAAGTTCATTTTAACTTTTATTTGCAATT TTTTATCAGTAGATGGAATAACATGAAGAGAGAGACTCTCAAAAAAAGAC TTTTAGTTGCAGATGCTGCTCGTGTTTAGATATATTTGTGTTATATTGTA TTTAATGTTTTCAATGCTGTATTTCTGATTGCTTTTCTTATCCTTACTGT AAAGTAAGCTTGCTTTTACTATTTGCCAAAATTGACTGAATTCATAAACT TTAAAATCGAATTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014304TCONS_00014304Clytia hemisphaericatranscript
TCONS_00014303TCONS_00014303Clytia hemisphaericatranscript
TCONS_00014302TCONS_00014302Clytia hemisphaericatranscript
TCONS_00014301TCONS_00014301Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014302-proteinTCONS_00014302-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:210050..218714 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1 0.86 0.28 0.18 2.48 2.1 3.57 3.75 2.86 3.47 3.07 3.64 2.55 3.42 1.93 2.17 2.6 2.67 1.47 1.1 1.57 1.56 1.18 1.41 6.45 7.84 1.06 0.39 1.04 0.87