XLOC_008110 (gene) - C. hemisphaerica

Overview
NameXLOC_008110
Unique NameXLOC_008110
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000188:100100..109886-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008110 ID=XLOC_008110|Name=XLOC_008110|organism=Clytia hemisphaerica|type=gene|length=9787bp|location=Sequence derived from alignment at sc0000188:100100..109886- (Clytia hemisphaerica)
AAAAACAATCTCCATGTGAAAATAACTTGACTTGATCAGGTATGGCCCGA CTGTTCGGCTTTCTTGGTTTAAAAAAGACTAACTAAACTTGCAAACTCTG GATCTTTTCAAATGGGAATGTTTTAACTGTTTTGGCTTCAGTATGGTCAG ACCCATTGATTCCGAAGCTCTAAAGGGATTAGATCTGAAACTCTTGGATG GGAAAAATTGTGGTGCGTCTCACAGCAGACCGAGAATACTACCGTAAGTT GGTCTAATCTCGACATCCGTCTTCTAATTTCGACACCCTTCTTTAGAGAT AGGAATAATAGGAAAGTCGGAATCGGTGATTGAAAAAAGATTTATCCTCC CTTACCACTAAGCAAATAAAATAATTTCGACCTTTTTTTAATTTTTCAGC TCTAGTAAAGGGTGTCGAATGGGCCATTCCAGTTTTTATTCGTTACCCCC CAATGGACGACACGGAATTTCCGTAGCAAATTGCGTTCAAGAAAGTCCGG AATTTCCGTAACAAATTTACAAAATACCTATCAAAACCGTGGAATTCCGT TACTGTAACCTAAAAAAATGTTGGAATTCCAATACTTTAATGCAAAATTA AGTAAAATTCATGGAATTCCAATACTTTCTCTTTAAAGTTTGCCTGGAAT TCTGTGCCAAAATTTATTTCAAAAATTGATGTCTTCCATTAGGGGGTAAT TTTTTTTTTCTGGAATGGCCCAATTTAGAGGAGGGATGTCGACATTAGAC CAAGTTACGGTATATTTTTTAAATAATTTGAATACTGTGTTATATTAAAA GTAAGACGTAGATCACAAATAAGTTGTGTTGGCGTTGTCCGACCGACTAA CTTTCTATCTTAAAAATCAGACATTTTTCAGTCGGAAAAGTCGGAAATCT ATCGGATTTTTTATCAATATTTTTCAGTTCAAAGCATTTTGTAAATTCAT CGTTAGGCTGATGGAATTTAATGTTATGTTTACCGTAAGCAGCCCGCGTG TTCACCTATCACCTTCAAAGGAATTGAGGTAAATTGGATTCTAATTTAAT CGACCACCCGTCGAACGCAGTCGAACGTAATCAAACATCAATCGAACGTA ATTGAACATCAATCGAACGTAATCGAATATCAATCAAATCAATCGAATTT TACCCAGAATTTTACGTTCGAATGATATTCGATTCATTCGACAATCGAAT CGCAATCATTCGAAAATGTGCGCGCGGTCGACTAAGTTACTATATATCGC TCAACCATTTTCAAAATCCTAAGTTCGTGTATGACTACATGACATCAATT TTCGTATCAATTTTTAAATCCTCGGATCACTCCGATCGCAAGTGAAGGAT CCTCAGTGCTTTATATTTTAAATAATGAGATTGCTCCAAAACGAAAATCT TCCAACCCCCGGACCTTATTTGTTATTAGGACCCCCATCGTTTATTTAAA TTTGTAAAAATATTTTCAGCTGACAGAGGGAAGGAAGGCTCCTTATTTTG CTCTATAAAGCCTGATTTTAGCTTATTTTTGAGTTTCTAGAATTAAAATT TCAATTACCTAATTTCAACAGACAATTAGCCCTCCCCTTATTAAGAACCT AATAAGAGTTAGGATACAGTTTGTTTGTTGGTTCTTGGTTTTAACCATAG ACATTACTGTGGTTTAATTGTGAAGACAAAATTTCAAGGCAAAGAGTTTC ATATTCAAGTTAAAATCTTCATACAGTACTTAACAACAACAGACAGGCCT GTCTGAGAAAAATAAATCAAAAACAGTCGAAAAGATGACTTTCGGAGTAG GGAGTGTCAAAGACAAAGGGAAAGGGGGAAAACGCAACAAAAATATTTTC AGATAAACTTTTAATTTGGAGTTCTTCCATAAAATACACCAACATCAAAT CTGATGATCTATAAGAAATTTATAAAACTACTTGACATGATCCAAATATT TTCAGCTTTTGGTATTGTCCGTGTGAAGCCAAACAGTTTTTCATCACTGC ATACAAAAAATTTGAGATTCTTGAATGTTTGCCAATATGCGAGATTTCTG ATAATATAATATGGGAAATGTAACTGAATGTAATGTCTTGTATTTAAAAA CCATATGACGAGCGATATTTATAAAAGTTTTCTCCCAATTCTCTTGTTTG CGATAAAGGTCCTTGACTTTTTAAGCATCTCAACATACAACAATCATTAC GGCTTGACGATAATCAAGAAATTATTCACATTGTTTTACTGTTTCAAAAA TGTTGTCTTTTTTAACCATTATTATAACCAACGCATACGTTTCAATCATG GAACTCCTTTCCTCTGCTTTTCTTTTCCATGAATATCGAAACAAAAACAT AGGTAGAAAAGGAATCAGTGCTTTCAATCTGAATAATCCAATGATGAAGG GTGGTTTCTTCTCTATCGAAATAATACTGAACATCATCTGCATTTTCAAT TATCAATCTAGAAACTTTCAAATACATCTCTGAAAAATTTGCAACACCCC TCACTACGAAACAAAACTTCTGGGATCGAAAAATGCTTCTCTATTTTGTA AAAGTCAAAAGATGCAAACCAGGCCATATTTTAGAAAGGCAAGGCAGCGT CCATTGGTGGCCAAAAAGGGCACTTTTTCCTATGTTGTTCCACTAAAAAG GCAGTTTTTACCAATATTTTAGTAATTTCAGGAGGGGCAGCGTCCGGTAA CCGGACGCTTAAAGAGCATAAAGAATGGCCTGCAAACATCGAATATTTTC CAAGAGTAAGGCCTAAAAGCCTGGAGCTGTCTATTGTGTAGACCTGGGCC CGTGCAATACTTGATTTTCGGGATTTTTTTAAATTTTTAGAATTTTGGTA TTTTGGAATTTCTTTTTATGTTCCCTTTGGCCAATGTGTTTTTAAGATGT TTAGACTCTATAGATCCTGAGGCTGTTGTAAAATTTTCCGCCGGGGATAA AAAACCAGGTAAATAAAAGTTTTGTCAACTGGGAAAAATGTTGTTGCCTT AATTCTTATAATTTTCGTCACTTTCAAGTTTCACCCGATATATTTACCCA GAAAAGGCACTCTAGTTTTGCCTAACAGATTTCCCGCAAAAAGAATATTC AATTAAAAAGCTGTTGTTTTCACCTTTCAATAGTGCTTCTCAAGACTCTA CACTCTAAATATTTGTGAGGTTAACTAGCAAATCAGCATAATCACGAAAA CGGCCGAAAAATGAAACAGGCTAGTGAGTTTCAACCAATAAAATAACGTA TTTTCACGAGCCTTAAATTTTTCGCCAATCGTCGTGATTATCCTGGATTA CCTCAGTATCATTTTCAACGCAAACAGAGTGGAGGAACGTACTTAAGCGT TCTGGAGCGCGCATAACCCCTTTTTCTAAACATTGATTTTTCAAAGATTG TTTGCGTTATAAATTGCTATGCCACTGTTTTTTGCAACCGTGATATGTAA CAAGGATCATAATGCAGCTAGTGCGCTTGATAATTCTTGCCGTGCGACAA ACCTATTATATTCAGGGCGCATTTTTCCAATGATTCTAGTGCTGACCGAC TGCCTAGGTTCAGAGCGCACTTTTCCAACGATTTTAGTGCCGACCGACCG TCTCACTTTTTGGGGCTGGAAATGACGCGAAGTAGGAAGTAGTCAGAGAC AGAGAGCAGTTTACGACTAAAACTCATATGTCAAGATTACAGGATTAAGA GTACGTGCTGATTTTACCTTTTTTCATTGGTTTCAATTCAGTTTTGGTTT ATGGCCAAAATCTTAACAAGGCCGTTTGTAAAAAAAGTTTGGTTCCCGTC CACCAGACCAACCGTGATTTCTACTGAAAAATTAGGAAACCATTTTGCGT GACAGCTGAAACTCTACCATCATCCTCCATGTTTTCTCTTTTGAGAGAAA GAGCAAACGCTAATCCAGGTCTTGACTGCTGAATCTCATCCCACGCATGC GCTCTTAAGGGGATAGACCCGCAGGATTATATGCCTTAGCAATGATGATG GGTTATGAGATTAACGCTAATCTCGCCCAAAAAACAATTCAAAACCCGTT AATTCTATTTTTTCCCAATTTTCAAGTCAGATTTTTCATTGTCGACTATA TGGAAGCATCAAAACAAACCAGTGGAGCTTTTAAGTAGTGAAAAAGAGGC TTAGGGCGATCAAACGTCCGTTTACTGCCTTTTTCTAAGGAAAATTCCGC CCTCTCGGACATTTTGTTCAAACAGAAAATATTTTTCGCCCAACCGACCG ACCGGCCGACCCACTTTTTTATGGTTGGAATGACGGGAACCAAGGGATTT TTTACGAACGGCCCAACGGGGCCCATTGGTTGGGTTTTTGAGTGGTTTTT GGTGTTTGTGTTTTTCTGCTTGGCTTTTTAAACTTTATGTCTATTGGTTT GTTGGTTCTTCTTCACATAAAATTCTCATTTCTTGACAGAATGTTTGATT GGTTTGATTTATATATTTAGAAAAATTCAAAAAAATGGAAAAAAAAACGT ATAATTATAAAAATATTAGTGCCTTTTTATGTTATATACATCTTTATTTT ATTTAGTATTTTCAACACTTTCTCTCCTTGAGGTCAGATCTCTGATCTTC ACCATATATATATGTATATTATATATATATCCATATAGTATTATTATGGT TACAGGGCAGGGGTGTCCATCCGGTAGAATGTAAATCACTAGCTACCAAT GCTGAAATCTTTTTCACTCTGTCGAAACGTCTAGACGGGATACCTACATG GTGGTTCCATTAGGATAGCGGCCCTCTTTTAGAGGGGCACTTTTACCACC CTGTGTCTAAACATTAAAAGGGCACCGGTATTATTATATATAATAAGAGC AGCAAAGTCCAAATATAAGCATCTTTCTGATTTTTTTGTAAAAATTCAAG AAAGAACACAAGATGTTGTGTAAACAGAATATTTCGATGTATTAATCACA TCATTATCAACTGAATTATTATGATATATTATGGTCCATCTCAGAGCTTG GGAAATATCATGTGTTTCCATTTCAAGAAATCAGTCAAGAATCAATACAC AATCTCTTTTGCTTACTATTTACCGTAAGTTGGTCTAATATCGACATCCC ACGTCTAATTCCGTTTTTTGGTTTTTAGTATCCTAATTAGGATGTTGATT GCTATTTTGGACACTTTTTTGTATCCAATTTAAGATACTCTCCTAAGTAG GAGAGATTGCCGAATGTATCCTAACTTGCACTTGATCTTGACTGGAAATG ACTTCATTCAAGTCATTGATGAAGCAAGCAATCAACAAAAGAAACCAATA AAAGATCAAAGAGAAAAGCCATAAGTGGGAAAAAATGATTGTTTGCCAAT CTTAGGGATTTGCCAAACTCAACTAGAATTTCTGTCCAACTATCTTCTTT CATGAGATTCGGGTGGCAGAGCAGCATATGCATTATACCCTTATTTCCTC TGTCTAAGAGTGTAATAGTGGGCTAGCAGTGGTGCAGCCGAAACAGTTGT GAAGAAGGCGTCTAGGTGTTTTTGAATATTTCTTTGGGACAGTTTGTCAA ATCTCTTCCAGATATTTTTGTTTGTAATGTTAACAGCTTTGAGATTGCAA ATACTCGCCAATCTCTGACTTTTATGGCAGAAAATGTCTCCTTTTCTTTT GTCAAAATTTAAATTTGGGACCTTTCCTTCGATGACGTTCCAGAAATTAT ATTGATACTCTCTCCGTCTTTCGAGGCTGTACAATTCCAATGATTTTAGT GTTTCCCAATAGCTGAGATGTCTGAGACATGAAATACCATGTTGGAACGA AAATCAGGCAAACCTTTGCTCTTTTGAACAAGTTTAGTGCTTTTTTTTTT AATAAAGTAGGCTTACTTACTACTAAGGCTGATTGTGAAAAATCCACAGG TAGGAAATTAAAATCCTATGGTGAAAAGTTTACTTTTTGATTGGACTACA AAATGCGCATGATTTTGACACCCGTTCAGCTCTTCCACCGGTTCTTGGTT CAAAGACTGGTGTTGTCAAATTTGCAGCAGGAAAACTGGGATATTTGACA ACGTTGCAGAATTCAACAGCACTAAAGTTGCAACGCTGTCATTCTATTGA ATTTTCCGAGCTGTTACCGTACTTAATTACCTATAACAATCCGAAATTAT CCTTCAAAACAATCAAATTGATCTGATTGGTTGAAACTTAAAAAGTATTA TAATTATTGATCTAAATGAACCAATCAGTGCTCAAAAAAAGGGTTTGATT ATTGAGGGAAATTTTGGAATGTAATAGGTAAGTACGATAATACTGACTAC CTAATCTGTTTGGATATTTTCCAGACCAGAACTCCTATTTACCTATGCAA AATCTTTATTCTAAATTAATTTACTTGGCTTGTAATTTGAACAGTATTTA CATAAACTACTTCAAATAGGCTATTTTAGAATAATTATTAGAGTATTTAC ATTGTGTATTTGCCTTCATAATTCCAAGCAGTTTTGAAGTATTTTATTGT ATACAGTAAGTAGTCAGGTATTTTTTGGCTATAACTTTCTAAACAACTGA GTGAAGAAAAATGAAGGAGAAAAAAAAAAGAACCTTCTTGTTGTAGAATA GAATCATTGGTATCCTTGGCAGAACAGTGCTATATCCCATCAATTACCAT GGCTTCAAAATTCTTTAAAGGGTACCTTGTGAGTTCAGCAGCAACCCAAG ACTACACTGAAAAATTCACTCAATGTAACTGGATAACCCAGCCGATTGAC TGAGCCCTGGCCCCACGCACCTGGGGTAGCCAATTCGAGTCTAGTCAGGG TCCAAATTTTTCAAAAGGCATAAGAGACTACCCAAGGAGACATGTACCAG ACCCCCCCCCTAGCTCAAGATTGGGAATTTTCTGGAGATGTTAGTCATAT CTACAGGAGAAGGCATGTCAAATTTCAAGCTCCAACCGCCCATGGTTGAC GAAGAATTAAAACAGAAAATTAAGGTGCTGGTCGACCTTGGCCAATTAAT TTCAGAACTTATTCAGACACTTTATCCCTCTCTTTTCATGCGGTCAAAGT GGTTGAGGTCATTCTCTACCATCTCGAAAACAAGTCTGCGAAATATCTAA TTCAAAGCAAAAAAGATTGGTGAAACGGCATCTCTTTAGATTTTCCGTTG AGTCCATTTTGTTGATCTGGGCTCTGCTGGGCTTTAAACCTTTACACAAA AACCAGAAAAATTGAAAACGCTGTGGAATCACTCCAGGTCAATTTGTCCA TCCTGTACATGCACCTGAATTTTATGCACAGTTGCATAAATATTTAAAAA GTTACCAAAATCGTTTAGGGAGGGGGCCTCAATTTTTTTTACATTANAGT TGCATAAATATTTAAAAAGTTACCAAAATCGTTTAGGGAGGGGGCCTCAA TTTTTGTTACATTTTTAACTTTTATGTTTTTTTCCTTTAGATATAGAAGA TGTCATGTCTAAGTCAAGCACAAGCAGTCCACTAAAGCTTAACAGAACAT TTGCAAAAAATATCGTAAAGCACACAGATGACAATAATAGGATAACATCC AATATCCAACAAACTAATCAACGTAAATTTGTAAACCAAGAGAGGAAAAA ACATACTAAATTACAATTGAGTGCTGAAGGAAAATCAACAAAGCAAGGGA AAACTATGTACAGTGACTACGTTACAGAAAAGCTTTCTGAAAAAACTCAA AAGAAGGGCATCATTCATCCATTGGAACAGATGAAAAAGCTTGTCAAAGA TGCTGCAGAATTTGATAATACAATGTCAGAGAAAGAAATTCAAAAACTGA GTGGCACTTTCATACCATCAAAGCGCCCTAAAATTATTCTTGATAAGACG CTACTGCATAATCACTTGAAGGTTAGTTAGATATGACAACTACACTTAAA AATAACACTTTCTGTTTTTCAAATGCTACTTACTTATAAGGAAAATCTTT TTAAAAGCTTTCAAGCCAGGGGAAAACATGGATTAGATTGTTTAACTTTG AGAGATTGTATAAAAATAAGCTTCTAAGTGGATTGTTAGTTGTACATGTT TTTGTTTTCCATGTTAGCATACCAGCGTGCACAATAGATTGAAAGAAGAA GGTGAAATGTGGGAGAAATTTCAAGTGGAAAAGAAGGTGAGTTTTTGGAC CAACCTGTCGTTCGTTCGTTCGTTCGTTCGTTCATTTCTTGAATTTCTCG AGCTGTACTTTATATTTTTTTATGAAATTTTGCACACTGACGCAAAATGA CTATACCTAAAATGTGACAGAGCCCGATTTTCAAAATTTTCTGCCAAAAA AATAATCTGTTGATGTTTACAATTTGACCTTTGACCGAGTAATTTAAAAG CATCTGAAGTTGAGCCAGTGCGGTTAGTTAGATATCATATTGACAAATAA ATCATTCAAATCATACAAAAGTAGCCCTTTTTTCATTTTAGCGCACAAAG CTGCAGTCAAAGTCTTTAAAGGCTCCAATAAGACGTGGTGGCATGTATGC TGACTCTGAACCAGGGGCAAGTCTCACTGTCAAATTACCAGAGAAAGAAA GATCCATCAAAAAAGAGAGATCAATCAAAAAAGAGAGCAGGAAAAGTTTG AAACGGACTGTTATTAGAACTGTCACTTCTAATCAAGAACTTTCTCGTCG TAAAGTGAAGAGACCTGTTCAAACCATTGACATTCCATCAAGTAATGATG AAAGCAGTAACCAAAATCAACCTGTTCAGGGAAAGCGTAAAGTTAGTAGA ATCTCATTGAAAACAAAAGAGGCCAGCTCTCACAAAAGAAACGTCATCAT TGAAGATGTCCCACTTAAAAAGAAGAAAACCGAGCCTGCTATTGTAAGAA CGTATGGTAAATTGAATGCAGATATGATTGATGAAAGACCTACATCTCAA GTCTCCTCTGAGAAATGGGGCCATGATGGTTTTTTCGAACAAGAGAAAAC GCCAGTTAAAAAGATAAGTATCGTTAAAAGAAAACCGATCACCGTGTCGG ATGATGAAGCGAACGAGGATGATTCAATTCACAAAACAAAAGCACGACAT ATCCTCAAAAGTAGTATCCATGTTAAACCAGCAGTTAAAGAAAAGTCTGT TGAGCGACAAACAGAGAGACCGAAAGTACATAGAACAATACAAAAGAAAC CAACAAGAGAAACAACCTTAGTGAAAAGGAAAGAACGAAAACAACGCAGT CAAAGTTCTTCTTCGTCTTCATCTTCTTCGGCATCAGGCAGCTCTTCAAG CAGCAGTAGTAGCAGTGATAGTGATAGTGGATCCTCTTCCAGCCTCACCA GTAGCTCATCTGATGACGAAGATGAAAAACCTACAAAACGTAAACAAACC GTTGCCAAGCAAAAAAAACCTGCTGTCAAACATAGGCGCAATAAAGTGAA AAACACTTTCTCTGATTACGACAGTGACTTCCAACCAAGAAAATGATTTC TTTTTTTTATTCAGACTTTGTATTTGTAATTTTTCATAATTGTTTTGTGC TTCTTTTAAAGGGTTTACCACCTATCAATCTGACTTATAGAACTAGTAAT CACTAACGCAAAGTAGTCCTCTAGAGTTTTTTATTTGTTATCATTTATAG GAGATTTTATGTGGCAATTTTATAGTTTTATTCCTGTCTAATTAATCTGT TATGAAAGTTATTTATTTNCAATTTTATAGTTTTATTCCTGTCTAATTAA TCTTTTATGAAAGTTATTTATTTCTCCAGAGAGCCCTGTTGAATTTCTTA ATTCACTAACTTTACTGCATCATTATTAAACTTTCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014501TCONS_00014501Clytia hemisphaericatranscript
TCONS_00014500TCONS_00014500Clytia hemisphaericatranscript
TCONS_00014499TCONS_00014499Clytia hemisphaericatranscript
TCONS_00014498TCONS_00014498Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014500-proteinTCONS_00014500-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000188supercontigsc0000188:100100..109886 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
48.99 47.68 23.68 17.35 81.02 62.3 35.87 39.63 23.42 27.58 21.06 15.56 14.09 13.7 19.14 23.56 24.98 23.98 9.61 9.49 19.39 19.26 55.86 47.22 30.87 31.12 13.21 11.18 37.66 39.51