XLOC_008216 (gene) - C. hemisphaerica

Overview
NameXLOC_008216
Unique NameXLOC_008216
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000197:130469..133099+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008216 ID=XLOC_008216|Name=XLOC_008216|organism=Clytia hemisphaerica|type=gene|length=2631bp|location=Sequence derived from alignment at sc0000197:130469..133099+ (Clytia hemisphaerica)
gttttgaatggAAATCATAAAACtgaaatcataaattttacgtAAGTAAC
AAActtgaacaatttttttctctttttagtcAGCTATAAATATCTAAATT
TGCAGGAGCACTTGAAAATCTAGGTTGTGTAGTATAGTGTGTCTGTATAT
TGTTAGAACGTTGTATATTTGAATGGGATTTGGGTAGCTACAGAATCATT
GTTATATACAATCCGAATTTTCTTATGTTAAATCTATTCGCcatagtttt
attaaaaaatcaaatcaaaattagtAGCGTAGACAGAGGTGAAAGAAATT
TGAGAGCAGATTGAAACGACACAGTAAGTATGTTTTTATAGTACGAATAG
GTAAGTGCTTTGccgtaaaaatctgctctcctacgcagATCGTTTTTCAC
CCATATCTACGCTACTGTACTGTAAAAGCTGTTTGGCTACGCCATCGTCA
GAACAAACATAAAAGCAAAGCAAAGGAATCgataaaaatgtaaatacaTA
TGAAATTATTCTTTAGGGTATATTCAAGTAATGCCATTTCTGAAAAATTG
TACAGTAATTGTTGTGTTTTTAGTTGATTGTTAAGTGACGGTTCCATGGT
AGCTATAAACGACGCTTCTAGAAACTTCCTATTCATCCCGAAATTTTCTT
ATGATTCTTTGTCTTAGACCACTCTCGTCATGACCATGAAGATTGTAAGA
GGGAATGGAAAAGAAATCACTTCGTATATACGAgacaataaaagtgaaat
cataGACGCCTTTGAGACACCCGGCGCCCTTCTCCTCCGTGAATTCGACA
CAAATCAGATTGAAATTGATGAAGTTGCCCGATTAATAGGATATACACCA
GCGCACACTTATATTCCAGGAATCGCTCCAAGGAAAGCTGCTATAGAAGG
AAATCCGTTCGTATTTACTTCGACAGAAGCACCGCCCCATCTCCCTATCC
TTCCTCATACTGAAATGACTTATTGGCCGGACCCTCCCCATCTTATACTG
TTTCAGTGCAAATTTCTTGATAGTTCATGTCCTCAAGTCAATGCAAATGA
AACTGTGCTATTTGACATGAAACTAGCTGCTGCTGAGCTAaacgaaaatc
tgcttgagaAGTTAGCAAATGGCTGCATTATGGAACGAAAATACCCTGGC
AAATTCAACCCAAACTGGGATATTGAGGACTCTATTGCAGGAGGTTCTTG
TTGGCAAAAAGCTTTTGCTACTGAGAATATAGCTGATGTGGAGTCGATAT
GTAAATTGAATAATGTTGAATTTGAATGGATATCAACAGTAAGCAAGGAA
CCACCAACATTGGTGACAAGATATAACTCATCCTGGTATGTCAATCAACG
ATTGGTTTTACAGACACCCTTGCTAGGGAAAGCAGTTTACCAAGACATGA
TCAAACGTTTTCCCCAAAGGTTTGACAACCAAAAAATGCACGGAACTGTG
GAAGGTGGTTCAGTTGCCCCAAAAGTGGATCTCTTACATCCTAACATTCC
TGGCAAACCTTTTCTTGAAGAATCGGAAATTGTTGCGTTGATGGAAGCTC
TTTGGAAACATGTTGTGTTTATTGAGTGGGAAAAAGGTGATGTTGTTTTG
ATAGACAACATGAATATGGCTCATGGAAGGATGAATTGTGCAGGGAAACG
GAGGATTGTTGCCTCAATGGCACACAAGCGTTAAAGATTATCTGGTCAAT
GAGAAATATTGGAAtcataaactttttttaatttattaatttACGCATCT
GGAAAGTATGATTATATTTCCGtttatcatttttcaaattttacacgTTT
ACGTATACTTGtaatttgtaattgcttgcagtattcctTTGAATTCATTT
ATTGTTCGGTTTCCCAAATGCCTAAGGGTGTTTGGCATTTGAAATGTCAA
TTTGAGCGGAGGAATCCCCTTTTCAagcatttcaaaacaaacaaagagaa
aataatCACATTTCACAGGTTATGACGAAAAATACTATGGAAACGGCCGA
AAGTATCAAAATTGAGTCCCAAATGCCAAATACCAAAAGCCGTCATATGT
AAATGAGTGTGTGGTCTGAAACTGTTGATTGCATCTTTTTGTTTGTGATA
GTGATTCCAAGACCACCGACACGAGGcggaaatatgaaaaaatttctttt
acgATCGTTACATGTGTAACCATTGAGGAGAGCTGATAGGAGTGATGCTC
ATATGACTTCTTCAAATGGAACAAAATATTCTCTTGTCACAGGTACGGTC
CTTATGATGTAGGTTGTGTTGTATACTGTTTGTGAATGCACAGTACGCTG
AATGGGGATGCATCCTGGCAATTTTGCTCAGTGACTTTTTTCAACGataa
taacactaaatcgaAGGATTAGGAAAGTAACCAATCTTTGGACCATATTG
AACGATGGTATTCCACTAATCTTCTAACGCTTCGATAGAGCCAAGATCAG
TGAGGCCATCAGCAAACGCGATCTTCTTAGCTGTGCTACCTGCTGCTTCT
AGAAGTGGCAAAATCGCTAGCGAGTATGTTGTCATTGATGTTGGATTTGG
ATTACCCTTCTTTCGATGCTAATTCTTTGCCGCGAGTTAGGAATAGACGT
GCTGGTTTGGCGTAGCTGCTTTGTAcaaccc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00014670TCONS_00014670Clytia hemisphaericatranscript
TCONS_00014671TCONS_00014671Clytia hemisphaericatranscript
TCONS_00014672TCONS_00014672Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00014672-proteinTCONS_00014672-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000197supercontigsc0000197:130469..133099 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14	0.17	0.11	0.02	0.88	0.55	2.39	3.03	2.07	2.4	2.55	1.46	8.25	9.56	3.04	3.92	1.78	2.31	12.79	11.3	2.69	3.19	1.2	1.6	1.47	1.19	0.48	0.6	1.92	2.78