XLOC_008548 (gene) - C. hemisphaerica

Overview
NameXLOC_008548
Unique NameXLOC_008548
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000208:413241..417426-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008548 ID=XLOC_008548|Name=XLOC_008548|organism=Clytia hemisphaerica|type=gene|length=4186bp|location=Sequence derived from alignment at sc0000208:413241..417426- (Clytia hemisphaerica)
GGCTGTATTTCAGTTATTTAATAAAAGATATGTCTTGGTGTAGAGCTGTG
TGGTTAGAATCTATTGGTCGTGATCAGTTTCGGGAGTTTGAAATGACCAT
TCCAGCTAAATGGGTAATTGACAATGAAGTTTGGTACCCAAATGGGATGC
AAGTGACCAATTCATTTAACAATTTTGCAGACCCACAACCAACTTGGTCA
CGGTTCCCTTTTGTTAAATTCAAACTGGAAAAAGGTAATTCTTTTCTAAG
CTATTTATGGCTGCTTCTTAATGTCACAGAATGTCATAGTAATAGGGTTT
CAGAAATAGTTATGAGAAGAAACTTGATGGTCTCCCTTTTGCAATAAAAA
ATAGCTCCTTTTAGATATCTTTTTCTTCTCTTTTCTCTAAAGGAGACAAA
GAAACATGTGATGCTATTGCTGATTTGACATCTGCTAACGAAAGTGAAAC
AGAAACAACGAGATCACCCAAGTTTGTTTCAGGAAAGGCACGTAAATCTA
AGAGTAAGTAAAACTTTTGATGAAAATGCTTTATTAACCTTGGAGAGACT
TTTTCACAACAGTGTGCCATTTTTTTCTACTCGACGTAAAATCCTGACCC
TTTTGTTGACCTTTTATTGTAAATCTACTGTTTAGTAGAAAAAACAGGCA
CATACCCATCAACTTTTTTGTCGAAGTATCGTTGGTGACGGCAAACTAAG
TTCAACCCCAGGGTTACAATTTCAAATGTTTTGAGATTATGATTAATTTT
AGAAGCCAGTATTCCAGATGTCTCAACCTCTGATATGCCAACATTTCATC
AAGCTTTTAAGTAAGTGAAATATTTTAGTTGTGTTTTGTTTTTATAGTTT
TCACATTTTGCTCCAACAGAACAATCACATCCGACATAATTAATTTTGCT
CCATTTATAGGCGAATAAACCTTGGAGGAGGTTTTCAATAACACTTTCTC
TAAAGTGATTGATTTTTGAAAACCTACTCTCCCCTTCTTAGCAAAGTTGT
CCCAAAATCACTTTATTCTTTTATGGCCTCTCCAATTCTATGTATAATTT
TTAGAGTGACAACTCCTCTTGTTTATTAGACCCCTCTACAATCAGGCACT
GAAGTTTGCAATTTTAGACTGTCTAATTGTTTTTCCTTTTTCTTGATTCT
CAGAATAACAGCATCAGGCTCTTCAAGTGCAACAGTAACAGCAGGAACAC
CACCAGGCAGCACTCGTCAAAGCAGGATTTCTAATAGATCACCATTTCTT
CGCGAAACATTTAGCCCGAGGATTAACTCAACTCTTCCTGGAAGTTCACC
CAACCAAAGTGCAACAGTAACAGCTGGAACACCACCAGGCAGAACACCAC
CAGGTAGCACTCATCAAAGCAGGATTGTTGATGGATCACCTTTTCTTCGC
GAAACATTCAGCCCGAGGATTAACTCAACTCTTCCTGGAGGTTCACCCAA
CCGTTGTGGTAATATTTGTGGTACTCTCACTATTACCCCTGTTTTCTTAC
CACATCTCTCCCTCCCTGAGAGTACTAATCCATGTGAAAATTCATGGTGG
AAAATTTTTTTGTCAGGGAGTAGGGGCATAGTGCATAGTGTGTGGGACTT
GGAAAGTCAGCATTCAGGTGGGAGTTTCTCGAGTGGTGGGACCTGAAATT
TTAGGTGGAGCCTTGAACCCCTGCACACTGTGGGGGGGGGGGTAAATTTG
CTCATTAGAAATTTTGTAATTTGTAGTTTGAATTTACATTATTGTTCGTT
CAAAAGTTACGCAAATGACGTAAAAACAGGGTTTTTGGTGGCTTCGGCTA
ATTCAATAATATTAAATGAAACTATATTATTCTGGAGATTCGCACCATGA
TGTTTGTTGAATATGAATTTCATTCAAACCTTTTTCTCTCATAATAAGCA
GATATTCTCTGATTATCAATTTAGCTATTGAACGACTGCAGCGACCAACA
AAAGAGGCAAATTCCTTAGTTGGGCAGCAATCTTTGTGTAAGTTTCTGTC
TTTTTTATTCAAAATATTTTTTTGCAACTTAGAACCCTGGGGGATTTCTA
TACAACAGCTTTCAAAATTGGACCCTTACAGTGCAGCTTATAATCGTTTA
AAACGTACCCTTACAGTGCATTCCATTCTTGGTGCAGCATAAAACAATGT
CTTGAAAATTCTCGTCCTTAAAATCAGCCTTGGCTATATCAGTAAAATTG
TCAAAAGTATAAAATTTTGGGGTTTTTAAAGTAAAAACACATTAATTAGA
ACAATTTTTACGAAGCAGATAAATGGAACAGGGGGCACTATTAAAATCTC
AGACATATATGAGTACTANACATTAATTAGAACAATTTTGACGAAGCAGA
TAAATGGAACAGGGGGTACTATTAAAATCTCAGACATGAGTACTAAAAGG
GTTCTTCGGAATGAAACTGATTCTTCTCTTGACTCTCTCGTTCTCATTTC
GTTGGTAGGTAACACAAAAAGGCATTTTAGTACTGACCCCTACACCATCC
CTTCCCTGCTGTTGAGTCAAATAACTTGTTTGTTTCTACACTCTAACAAA
AACAAGGTCACACTTTAAATGTTATTCTGTTTTAGCTTCCCATGACAAGG
ACCATCCACATCCCTTGTCAGCTGAAATCATTGACATGCAGTTCCCAATG
AGTGAAGCAAGTGAGTAACTTTACATGCCTTATAGTTTGGTCTTAAACTT
GTTCTTTTAACTTTTATTTTTCGAGTAGGGACCATTCAAAAAAATTTGTA
CGCTCAGTAGGATAAGGGTCAGCCTGAAAGTATCTAAAATATTCCTGTTG
TGATTTAATCCTCTTTGATAATTTTATTTTCAGGATATCAAAAGCTCATG
CTTGAGCGGATGCTTGAGATTTCAAAGTGTCAAGAGGAAATCAGAAGTAG
GCTTGTCCTGTTGGAGAGTGGTACTGCTGCTGGTCCATCTCGAGCGGTGT
CAGAGAAGGCAAAGTTATTACCCCGTCATCCTTTCACCAACGTAAATGAC
TTTGAAGAATGGGAAAAAGATCTAGACGATGGTCAAGCAAATCAATTAGT
GAGTATTTCCTGATACACTCCTTTATCTATTTATTGTACACTTGCGTGCG
TGTATGATCGCAGAGACCATGGTTTTCAGTCTGAAAGAATAGCCCAGTTT
TTGGCAATGAAAGTTTTAATATGTGCACAGTTNATACACTCCTTTATCTA
TTTTTTGTACACTTGCGTGTGTGTATGATCGGATTCAAATACTTTAGGAT
TAAATTTTCATTGATAAAAGGCCTAAATCTTTGAGAGACAAAGTTGAAGA
CGCAGACCATGGTTTTCAGTCTGAAAGAATAGCCCAGTTTTTGGCAATAA
AAGATTTAATATGTGCACAGTTTGTTAAATTATAATCGAACCACACTTTT
TCTGCTAGACCAAAGAGTTTGTCAGAATTGGAGGCAAAGACAAGATGGCA
TTAATGCGTAGTTGCATCGATAGGTAATTTTGCAAAATAGTTTTGAAAAG
TTTTTAACAGAGAGACCGTTCAAAATTTGAACCAAAGTTTAATAAGCTAT
TCGTCCTTTGGTCGAAATCATCATTAAACTTTGGCAGAATAAATGAATCG
AAATTGTTTCAGTGTGATGATCACAATTAAAGTCTTATGTTTGTAGATAT
GGAGACTGCAGTACAAATAGTGAAGATCTTATTTAGTTCTGTTCATGATT
TTTCGACCAGACATTTTGAATAAAATCTCTGATTCATTGTATAAACTAAA
TAATAACACTATCTTTTTTAGTTTAATGGATCGAACAACCCAGTCAAAAT
TTAACTTGGCTGCTTCTGTTAAACGAAATATTCGAAAAAAGAAGCCGTTT
GGCAACACAAAGACGTTCAAATGTCTGATTGGTAAGTTCCATGCTTCATC
AATATAGTACACACCCAGCGAACGGGCAACGTCATCTAACGTAACGTCGT
TTCTATAGATAATTTGTAAGGTTCTTAAGGGAATGAGGATAGTGACTACT
AATGACTTATTTTTTTGTTACAGATGCAGGGCAAAAGTTATTCAGGAAGG
TCAATTCCAAAGGCGTTGCGAAAGGCCCAACACAGCAAGATCTGCGAACT
TGCATTGGAAACGTCTTCAAGCATGCGAAGCCAGGAGAAGAGGAGAAGAT
CGACGACAATGAACCGGCGAACGACGAACGTGAACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015298TCONS_00015298Clytia hemisphaericatranscript
TCONS_00015297TCONS_00015297Clytia hemisphaericatranscript
TCONS_00015296TCONS_00015296Clytia hemisphaericatranscript
TCONS_00015295TCONS_00015295Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015298-proteinTCONS_00015298-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000208supercontigsc0000208:413241..417426 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.06	1.31	0.28	0.13	18.43	15.12	11.45	9.74	5.63	8.45	5.11	3.23	2.25	2.19	3.36	3.82	7.4	5.57	1.62	1.92	2.69	3.3	1.81	1.89	3.19	5.68	3.34	1.22	1.74	1.11