XLOC_008577 (gene) - C. hemisphaerica

Overview
NameXLOC_008577
Unique NameXLOC_008577
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000210:393114..401108+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008577 ID=XLOC_008577|Name=XLOC_008577|organism=Clytia hemisphaerica|type=gene|length=7995bp|location=Sequence derived from alignment at sc0000210:393114..401108+ (Clytia hemisphaerica)
tcagaaaCATAGACTTGTAAATATATTGTACAtagtaaagaaaaaaaaca aaaaatggtagACTCAAGTAGTGACAataaaattcttggaaaattaTCAT CAGCAGGCTGGATCTGTGATCAAAGAAAAGAACAATGGAGAAAAGATGGG TGAGCAATCTTTTTCTGTAGACAtgactttattattattataattattaG TTATTATCATTTTTCTAAATACCACTTTAATCagctttaatgggataaaa tttcgcgaggattaaattttgcggatttcatGGATTTGAGTGTCAACTGC GAAATTATGTGCCAATGGAATATGGAAAGTCCTCATCCGCGaaatctttt taaacaaaactcaaataaactactggcatcaaagaagcgctaataatgca tATTTTAAGGAGCaaacatgcatgatttggcagtaaagcaacaaaatagt gaaaatatttGTACCATCCATGAaataagtccccgcgaaatcttaaaaac atgatttttcagctttttcaatCCCCCCATCAAAAAGGTCAAATCCCTCC ATCAGCCTTATCCCCTCCATGACCAAAATGGGGACTTTGGTACCCATTAT AGGTTATTGTCATTATCACTTTATTTTCTCAAGAAACGGCATTGTAAATA AATTAGCTCGTAGTTACGTAGAGGAATCTTGCTTTTTACATGTGAGAATC AAAAGTAAAACTAAACTTTCCAGtatgtaaaaatatttaacaatggttGA AAATACTTAATACACAAaaattaaccccccccccccccctaaatcccccc ccccccccccaaaattttccccccccccccccccaaaattttcccccccc ccccccccaaaattttccccccccccccccccaaaattttcccccccccc ccccccaaaattttccccccccccccccccctaaatctCTCCGCCCCATC AGCCTTAGCCCCCCcccaacatttgaaaaataaaaaatatctgCCCATCA TACATTTGACGAAATTCTAAACCCCCACCCAATTTTATGAGGGGGGGTGA AGTCATGTTAAAGTTTTGCGGATGAGCTCAACTgagaaatttaatccccg caaaaatttATTGGTTGACATTCCAGTCTTTACATGTTATTTATTAATAC AGCCAAGCCCTAGTTAGGAGGACACAATCACTGGCTAAGTGGTATCTTAG GACCATAGTgtggaaaggggtctgatcccccttcttggcatctccccatc ctttaaaaatgcctatcccccaaggatcttggacaaaaatagctatatat gtgaaatatctttagagagagaaagcgaaataattccttcttctttttga ctcagactactctataagaaaacttcctttcatgaagacaaaatttcata acagtgcttgaaaataatacaataaatatgtaagccccccccttccctgc ccccccccccccctttttttaatgaaaatttctgatcccccttCATTTTT TTCGGAAGGTGTCACCCCTCTTTAGAAAGGGGGGTCTCCTCATTCCAATG AATTCGTTCAAAATGATGTGGTTATTATTATCATTGCTTGTATTCTTATT CACATTTGTTTGACTCTTGATTTTTGTCACCACACTGCATAATCTGGTGC CCTGCCTTTCTTATCTTGCGTACTAAAcgattgtattttttactgtacTG ACGATGACGATAGTCGAAAAGCTTTTACaataaattgaacaaatttttgt tttcttgatttttatcgaaCATAAACGATTAACATATTAGAAAATAAGCT AAAAAAATTTGAAGGGACAAATTGTATACAAACTGATTTCATCCCGTAAT AAaatatcgtattatcatatagcaaccatattactgtattacacgagATT ACAAATGAGTGCAGCCTATTCTGCTTTTGGATTCTTTATTGACTTCTATT CTTTCTTCAGGTACATGAACTGTTGCGGATGCAAAGGACAGGCTTATAAC CCAACTGATGTCGAACAAAAAGCAAACATTATCACACACGGGGTATTGCA AAAACTATGATTTCTTTTTAGCAGCCCCTTGCAGCTTTTGCTCCTTATTC ATAGATATACTttaagcgtacaaactttcgcgaacagaaattttcgcgag atcgaaaaatcgcgaaattcacgacatttacttacgcgaatttcaggaaa aaatattttttaagagcACAAACTTTGTAaacgttggataaaaatgagaa tttttaaaccaaaatttgataaaacgTGACAAATGTTCCTTGAATCCGAT AAAAACCAGTAAAAACGGTTGTAAAGAAATATGCTgaaaattttataaag ttttatagattttcaattttttaaagaaaatttcgcggcgagcataaact tttgcgaatcaCCCTATTAAGAGATTTCAAAGACtttaactttcgcgaaa aaggccaaaattcgcgaaaatcgcgaaagtttctgctcgcgaaagtttgt acgcctactTAAAGTAATAGGTTTTGAACGGGTGTAAGAATCAAGCTACA GTACTAACATTGACAAAAAATGGAAGAAGTTGATCTGTAGAGAGATCGGG CTAGATCTCCCTAACTCTCaggtttattttaatttttcctagcTCTCAGT TTTCTTAATATGTTGTTTCTACAATCGGTGACGAAATACTTGCCACAAAA AGGAAATCCACCGgagtgttttgaaaccacaatcgatttgcaagtgctct aacgtaggttcgaagggtagagttttaactctgagttttaacaggacctt aggatctgaggatccaaaggttcaaaaatggtccagtaggtcttgaaata tagcctagaaaccaataaatccctcccagatcgaaataatcgttgaaatc aagttgaagcccgaaattgacattctcgctcgaacttcaattttcgaaaa atggtaaattagccaaaagtgccaatatgttatggcactgattgtaggtT TCTTACTTTAAAAACTACTATTATAAGGTTATTAAAATTGTTCATTTTGC AAAGAATTTTTTGCGCAGAAGTACTCCAAGCAGCTCCAAGATATGTAGAT TGAAATTCGAAGCAGTGCTAATATTTATGTCAACCCTGTAACGTCACATA GCCGCTTTCTCTAAGTGCTGACGAAGAAAGAACAAAATTTAATACTCATA GCCACTCCACACAAGCCACTCCACACAAGCCACTCCACACAAGCCACTCC ACACAAGCCACTCCACACAAGCCACTCCACACAAGCCACTCCACACAAGC CACAAGCCAAAAGCTTTCCAAAACGATATAACACTGCTAGTTCGCTGTAT CTCAGAGTACTTCTGTGGAAAGAAATCTTCCCAAAACTCTTCAAAAAATG CACTATACCGGGTGTCTCTGTAAAAACTTtcccctgtttgattcaaaatt gcgaaaaagtgaaaaacatatattagcttgattttttcgaaatcgtttag aggagggtttaacttaaattttggtatatcaaactttaaagttgcttcat tagatcaaaagttatgaaaaaaaaagagtaaaaaaattgttttcaaaaag aacgcaaaaagacgaaaaaacaaGGTATCAAATTAGACAAGAAAACACTG TACAGACAgtaaagttttacttttgaacTCGACTGtgcatcttttttgtt ttattattcgtttttaataattttaattGCTAATTTAGAGCTCCTTTTGG ATTCATTAATGAGCATGAAGTTTCAACAAGCaacaaacttttatcaaaat ttttccaaaagtttccAAAGCTTAGCGAGTCTATTTGAGTGGAGAAGAGA AAGTTTGAGTGTCCTTTTTTCTAACAAAAGATTTGATACCCtattttttc gtctttttgcgctctttttgaaaaaattttgtttactctttttgtcataa cttttgatataatgaagcaattttaaagtttgatatatcaaaatttaagt taaaccctcctctaaacgatttcgaaaaaatcaagctaatatattttttc actttttcgcaattttgaatcaaacaggggggGTAGTTTTTTTAGAGACA CCCGGTATAATGAAATTCGACCAgcagttttattttattttaacaatata ccttattacacgaatattactaggcaagtattcaacggccttgaaattaa cactccAAAAATTAACATGAATTTTATCTgatttttcaaggacaccatgg ctggttttaattaagggagtttttattaacacgaaatttttcaattcgtg ttaataaaatgactagtaatattcgtgtaataataTATATCGAGTTCTCA TTGTCTTGTTTACTTTATCTTTAACAAGCCTACTATTTTATGATTAATCC CCGAACAAAGGAAGGTCTGTAATTTGTGCTCAATTTCTTCGTTCTAGATC AACATCCCTTTTGCAGTTGTTGCTGTTTACTTCATGGTTATCAAATCGAA AGACAATTTAGACTTGGTCTGTACGTTGGTGTATGGCACGAGTCTTTTGA TGTTATTCACCGTCTCTACACTCTTCCACGTCATCTCTTTGCTACCGAAG TGGAGGTATTAGActcttgtttttcatttttttgtccaCCTTTTTATTAA AAGTTGCATTTGGGGGGTGTGCTTTGATTTAACTAGGGTATTCTCAGGCG CCTGATAAACGGTGGTCGGAATAAAAATAAGGTTATTACAGACTAAAACC TGGCTTTTTGGAACAAAACATGAAACCCAAGCGGCGTAAATGCCCAGTAG TGTTGTTAGTGTcaacatatttttcaatttgCAGAATCGCCATACAACTT AATTTGCAGGAGTGAATTTTTTCGATAGCGCAAATCGAGTCGGAAGagca ataaaaaattaattgctttaatttttttgagataAGTATCTCTaacagtt tgaaaaagaaagattttaccATTATCACTCGGAGGTATTAATTATATGTA GTTTTTTTTTACCCATGTGCCCAATAGTTAGTCAGATAACCCGATTTTTA GTCTGGACTCGTCATTGAAAATTGCGCGCAGGCCCCGTCAAAATCTTTTC GACCAGTTGTGTTTTAAAGGCCCATTCCGCTGGGCCAATAAGGGATCCTT TTTTTGATagcactgaaaatattttcaaaaatttaataaacggcgggggt cctaataaggtccgggggttaCGAACAAAATCGATAAATTAACAAATAGG GGGTCCCCTTTATTAAGCACCTGAAAATTAATTAGGGACAAATTCTGAGA TACCAActtgtatagaccttttcatgaattacttcacggtcacgaacatc acttgcctcgtattaaagcaattaccatggtgattatgtcccttgagaca ttaaatgattttttttttaatagaaagtagttttagtAAAATCCGCTgtg agttaatcaccatggctataatttcaaaacgaggcaagtaatgttcgtaa cgtaatttatgaaaaagttctATTTTGCTACGTTTGCTTTTTGAATGTAA TTCGGGAATATCTGTTGCAAAAATGAAGGTTACCTTATACACCTAACCAC CTAACACTTTTCTTATGAGTTATGTCGGGTCAAACTTTTTCAGAAGGCCT GAGTTGAGGGAACTTATTTTTagcaaattttgagatttttaacaaaattc gCCCTGATTCAtccttgatttttttctattacaCCTCTTTTTAGGCCAAA AGAACCAATTTAAACTACCATTCGCCAAAGTTTTTACTGTCTTCAAACTA AATGATAAgttctgtttatttttgttgttgtttaggGAGAGTAGGTTACG AAAGATATTTCATTTGTGTGATCGATTCTCCATTTACATCTTCATATCTG CTTCTTACATGCCATGGTAAGTGTGACCAGCTCATTCCTTTCTCACAGCT TCTTACATGCCATGGTAAGTGTGACCAGCTCATTCCTTTCTCACAGCTTC TTACATGCCATGGTAAGTGTGACCAGCTCATTCTCTTCTCCCAGCCAATC AGCACTCTAAGATTTTCCACGCTAGCGTTTCTAGATTGTTTATTGCTTTC AGAAAACTTTCCCTTTCTGACTATGGTTAGCCAAAAATGCTAGATGGGGT TGAGGCCATAGCTAAGTAAACTTTATGGAATCTGTTAAGAAAGAAAACGA TTTTTTCTCTTTGCCATGTCTTGGTGTCCAATATGTGGGGTTTACCCTCA GACTAAAAGGGTGTGTGTTCAAAACCAACCAGTTTCACAGTTGTGAGGTC CTCTCTCGCCCACACTGAGTATCTGGCATTGTTTTGTAGGTTGCTTCTTC AGCGGACGATCCCGAACGCGCATGACATCGTGACTTTGTTGTGGTCCATT GCTGCCATGGGGATAGTATACTCGTTAGTCATGCATGAAAAGTATACCAT TTTGTTTTCCTTTGTCTTGTTAAGAATACACTCCCGAATATGTTTCCAAC TAGCAATAAATTGTTAAAAGCGTTGGAAATATTTCATCCATCTGTTTTAT CTTGTAGGTGTTATTGGGTCTTCCCAGAGTTCAAAATTGTAAATGTAGAT TCGGGGTGGGCTTTGTAGAACAATCTTGGGACGACCATAAGTTTTTGCAC AACTGTATGTGAACATCGCTATGTTTTTACAAATTCATTGTCAACTATGA AAACGATACGTTAGGTAATTTAAACATCTgtgagtttgtttttttatcca TCAAAGAACGATTTGATTAATATGCTACTTTTTCTTTATCCGTAGGTACA AAATGCTAGAGACAGCCATTTATTTGTGTCAAGGATTCGGACCCGCCATC TTTCTCATTAAACACGTAAGTCCATTTCTTATTTGTACCCTCCTCACCAC AGTGTTTCGAAACCATTTCGTTTCGGAGTCTGAACATCGTCTAAGTGTTA CTGGTCCACTCTCTTTTTTTAGGCATCCACAAGTTTATTCGAATTGGCGT TGGGCGGTTTGCTTTACGTCATTGGAGTAATTTTCTTCAAATCGGACGGT CACCTCCCTTTCGCGCATGCGATCTGGCACATCTTGGGTTCCATCGCAGC TTGGGTACATCATTATGGAATTTGGATGTATTTTTATGCAGGCtgaaaag cgatttttgatACGGTATTTTTGACCTCTTAAAATTCCGCATTCCATTAT ATTGTATTGTCCAACATTGTAGCCAgtttaacttaaattctttttggacc tactacggaggtcctttaaattaactgatgttcttccatccgtccgttcg ttcgtctgttaccagcttttctcgggattggctttatatatttttctggt tttttcGCACAGTAATGTAAAATCgtaatttttataatctgatggagccc gattttcaaaaaataatttttttggccaaattttgaccaaaagtccctaa aaatggggttttttggactttgtgtgaaattgcttcattagttttttcta ggcaaggttctctaaaaagtcaCTCAAGCCGTTTTTTCCGGAAAATCTTT TAGTGATATAAAAtggtaatttttaatttctgatggagcccgattttcga aaaataatttttgggcaaatttgggccgaattcggatactcacggtaatc tattcaagctgctcactacacttttttactctcttgctataTGTCCTAtt ttatctgattctcatcatcaggtaggtccattcagcatgttgcttgttaa ttCATATATTTTAATATTGTAGAAATTTTTCTGTTTGTAAATTATGCTGA ATTTCATTacggttttgttttttaattcttttttattgaattttttaagt taatttttttataatttcatttttaactttCGTATGCTGCGTTGGTATCT TGGGATGGAAAGCTACCCGGTAATGCATCGACACAAGATGTTTTCCAATA TACTCAAAACCGTACTTCATTtcgaaatgatgaaaataatcgctt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015331TCONS_00015331Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015331-proteinTCONS_00015331-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000210supercontigsc0000210:393114..401108 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MMDPREDICTED: monocyte to macrophage differentiation factor isoform X1 Homo Sapiens
MMD2monocyte to macrophage differentiation factor 2 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.96 5.43 3.96 3.82 4.28 3.56 4.9 5.47 7.26 6.16 10.15 8.82 12.79 16.25 10.31 10.88 9.67 10.95 12.46 9.42 11.41 11.19 7.66 8.91 9.58 9.46 5.1 6.21 7.29 5.67