XLOC_008628 (gene) - C. hemisphaerica

Overview
NameXLOC_008628
Unique NameXLOC_008628
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000211:69590..73493-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008628 ID=XLOC_008628|Name=XLOC_008628|organism=Clytia hemisphaerica|type=gene|length=3904bp|location=Sequence derived from alignment at sc0000211:69590..73493- (Clytia hemisphaerica)
TGAGAACGACAATTTTATAAAATGTTTCAGATGATATTCAGTAGATTGAC
AGAGAAGACATTAAAAAACCTTGATTCTTTCATCGAACGTTTCATGATAA
ACTAAACCTGTTATCTGAGAAGAGATACTGTGACACAAGGTATATCAAAT
AGAATGTCAAAAGGAAACAACAACAATACTATGAAATCACCATCCTCAAC
ACCCACCACCAACATGCGACAATTATGGGATTTCACACAACAACCTGACA
TCATTTTACAAGTGGAGAACCAGGACATTTTTGCTCACAAATCAATTCTC
TGCAATGCTTCACCTGTCTTTAAAGTCATGTTAGAATCGGAACATTTCAT
GGAGAAAAACATGTCTAAAATTATTCTCCCATTCAAAAGGATTGCGGACG
TTCAACAGTTACTCAATTTCATTTACCCCTTTGGACATCAAATTTCAGGT
AAATCTCATCTGTCCTGTTTCTTCAGTTTAAAGGCTTAATTTTTTAAATT
TGTGCGATTCGCAGCTTTTGAAATACATACATGTTATAATATTTTTGCTG
TAAGAACGCTGCAATCTTTACGCCTAAACCACTAAGAAAGATTTTTATAC
TAAGAAATACTAAAAAAATATACACTCTTTGAACAATTTTAGGCTCAAAA
CTCTAAAAATGGGCTCTTCCAGAAAAAAATTGTACATGGGGGGTGGAGGA
TATATTGTCCAGGGGGTAGCGAAAAATCATCAAAATTTGCCTTGTCCGGG
GGGTAAATTTGCTCTGTCCGGGGGTAATTTTGGTTGTCCGGGGGGTTACC
TGATGCTTGTCCAGGGGTAAAACCCATTGTCCCGGGGGCCAAAAGCCACT
TTGTCCGGGGGTAAATCACTGAAAATTGTTATATCCTCCACCCCCCCCCA
TGTACAATTTTTTTCTGGAAAAGCCCAATCTAAGTAATCCAAAGACTGTT
TGACGTTCTAAAGAAGCTGTACATTGTATTATTTCCTTAATCGCATCCTT
TGATTTGGTTTCTAAAAGTGATTAGCATCATAATTATTTTATTTTCCCAC
TTTTTAGAAAGTACAAATTTCGAAAGTCTGTTGGATCTTTCTCGCGAATA
CCAAATCGACGACATCAAAAATATTTGCGAGACACACCTTCTTCGTAAAC
CACCCTCCATTGAGCAGCTCATTACCGCTGAAGAATACAACATGGAAAAT
CTTCGTCAAAAATGTCTGAAGGAACTCTCGGAGAAAGCGCTGAACGGATT
GCAAGAGCATCCACGTTTTGGTGAAATCAGTGATCAAACCAAGCTTGCCA
TTATGGAACAGCAATTGAAACGATTACAGAATTATTGTCGAAAGATTTCG
CAGATAGCACATGCGTCAGATATGAGGTAAGAGATATGTTCTTTATGGTA
TCAGTCTATTCCTCTAAAGAATCCTGCATTTTAACACGCATGCGTAATTC
GTCGTTCTTTTAAACCACATGTAGTTAATTCCCGTGATAAACGAAGGGGA
ATGAATCGCTAGGACCGGGTCGGGGTTGTGGACGTCGTTTTTTATGAAAT
TTGTTGTTCTTTTTGTCTAATTTTAGTAATGCAGGATTCTCTATACAGTA
TGTGGCCCCCAAAACGGCGATCAAATTTGAAGTTTCTCTCAAATCTAGAG
AAAAAGAGGTTTTACAAAAATTTTTGCTGCATGAAAACCTTTAACATCTC
TACTTTATTTCCTGGAAGTTCTTTTTCANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGTTTAATTCTGAT
AAATCTACAAGTCAGAATCTTCATTTCAATGAAAACCTCCGTTTTGGGGG
CCGTCTCCGTTTTGGGGGCCATATACTGTATATTTCTTCTGTACTTTTGT
ATCTATTTGGAAAAGAGTGCCTCTGATGAACAACGGAATACACACATCCA
GGCATATCTCCCCATACACTATTATATAAGAGCGTGGTACCCAATGACTC
TCGCATGGCATTGGTTGACCCATAGTCATTATAAAAACCCCGGTCTGGCA
ATGTATTGTTTTAGCTTTTTGTTCAATTTTCTTTTGTTACAAACAAAAGA
CAACTTTTTGATCACGTTACTAAAATCTCTTGTTGGGATTGGTCTATTTT
CTAATCACATGATTAAAAAGTTTGCAAAATAAATCGATTTGGGTACGTAT
GCTCTATCTTTTAACAATAAAAAGAGACAAAAGCCTTCCAGACCAGTGTT
TTTATAATGACTATGGTTGACCCGAGCAAAGGTACACTCACTTGTCAAGT
GAATCACAGCACCGAGTAGGCGAATTAGACCCCTCTGCATGGAAGTTAAG
GCTTGAACTACACTAAAAAGGTCAAGTGGCTTTATTGAGCCATAAATTTG
GATAATGAAAGATGTATAACTAATTTCCTTTTCTATTTTCAGGTACATGC
CAATCATCACACATGTGAATTGTGGTCATCGACCCAAAAATTGCAACAAC
CCACATTTCATTTGTCAAATTTGTCGCGCGTCCGCTCTAAGATCTTACGT
CAAAGGAGAAAGTTGGAAACTTGGGCTCGATAAGAAATTTATTTAAAACA
TGTACATGTATATATTACTCTGCGACTGATCGAAAAATTTCGCTTTTTGA
AATTTTCAGATATTCGTCACTTTTCAAGTTCAGTTTGCAAATAATTCCTT
TAAAAATCCTTCGCATATGTCTTTCTACATCATATTTTAACTTTTAAATT
TTTAAATAAATTCTTAACTTTAAATTATTTTTTATCACTTGTAAGTAGAA
TTTTTTATTATTTTTGAAATAAATTTAGAGAACAGATGAAGCTTCTCATG
TCACTTTGAGTCATCAGGTTGGTTGAACGGCTCTCGAGTGCTGCTTATTG
AACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015456TCONS_00015456Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015456-proteinTCONS_00015456-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:69590..73493 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.03	13.87	16.78	18.53	19.61	13.53	3.31	4.48	1.17	6.35	1.52	0.49	0.23	0.6	0	0.15	0.26	0.11	0.96	0.54	0.47	0.15	58.11	51.52	0.22	0.07	3.43	4.58	34.55	39.69