XLOC_008731 (gene) - C. hemisphaerica

Overview
NameXLOC_008731
Unique NameXLOC_008731
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000215:85839..91137+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008731 ID=XLOC_008731|Name=XLOC_008731|organism=Clytia hemisphaerica|type=gene|length=5299bp|location=Sequence derived from alignment at sc0000215:85839..91137+ (Clytia hemisphaerica)
AATAACGGAAACTAATACAAACACAATCTTTTTCCTGCTGTAtgtttttt agaaagaaaagaaaaaggaattAATGGACAAAAGTTGATGACtggagaaa aacaacaaaagaaaagatACAACAAGAAAGGGGGAAACCACCATGTGAAT ACAAATGAAGTTATTGAGGAAGGAACCGGCTGACGCACGACAAAGAACGA AAACTACATATAAATAAGCGAATAGAACAACACAAGTGGGAATTGCTTTT AGATACATTTTATATTGACTTGTTGATTGACTGTCTATGAGACCGAATGT CAACAAATTAAAAGCTTTTTGGGTACCTACAATGATTTTGTGGTTTAATG CAttggttttcatttttctcaaacTCAAGAGATGTTATACACTTGGTTGT TTGTGATTTTAAAGAAATAACATTTGTATGAACATTATTATCTTACCAAG CTGTCGGTTGGTTTAAAAGTAGAAGAGGTCAATAACATTTTTGTTTCTGc tcaaaaattatttgaaaaaacaGAATCTGTGTTTGCGATTGAAGAATATC ATCTCTCTAAATCTCTTGTGTTGATTGTATCTAGAAAAACACACTATTAA AATCAGCTGATTATCAAAGAAAGAGCTGGGTTGAAGAATATATTGGATTT TGCAGACAGTAAAACTTGTGGTACAAACATGTGGTTTTGGTTTGGTTTAT TATTGACATTCTACTGCAAGACTCATGGTAAGAAACTTGCAAAAATATAA CAGAACGATATATATATTCTGGCAAATTGGATATTTAGCTCAGCAGACAA GTATATTTATTTATCAAGAGTTATAACTGATCCAAATATAAATTTCCTTA GTTGAGATATGGCATATACGTTGATGATATTATATCGGCTTCCCTAGATC TATTTATGAAATCTGGCTTTTAGATTTTCAAGGAAATGGTGATATAATTT TCATAGAAAACCAGCAAGACAGAGGATTCTGAGAATAAAGTTTAGGAAAA AGAAATCAATCGATTTTCGTCGTCTTTGTTAGTGAGATAGAGAGGGGTAT CAGGTGTCTTTTTAAGAGAACTTTCTTTTACTTCAATGTTCGAAAGGCCA AGTACAGTAGATCGGTACATTGCAAAAAGAATTAGAAATGACTCTATAAG AATGTACAAAATAAATCTGtgattattttcggaaaacaacTTATTGTGAT TTTAGAAGAGAATAGAATAAGACTATTCTTCTGAGTCTATGAAAGAAGAA GCTAATACCACGAGGGAATAACAACAAATAGTCGAGAAAATCTTTTcgac tttatttttttttgtacaatgaGTGTGATGGACAAAGAAAAGAGGAACCT TAGGATAAAGACTGCCCAATTATTACAGATTACAGCTAAAGAACTCTCTT AATTGATATCAAGAAAACAACTTCTTGGAGATTGACGTTCCATGAACTTA CTTACAACTTGAAGTTTATAAAACTACATGTGTTGCGATACGTTTTTGAT TTCGAGAGCCAAAATCGTCATCCGTTCATTACGTCAGCGAAAATAAAACA CTTGAAGAAGCAAGATTTTCGACCATTTAACAACTTAATTGAATTGAGTT GAAAGAGTTGTTTTGATATTAAGTTATGGAGTCTCTTGTAGTTatgatgt ttttgatttttcttcctttGATAAATGGTAAGCTGTGGAGAGTTTTTCAT TTCTGTTGGGGGTAATTGCAAAGAAAAACAACATCGTAGCTTCTTCTATG ATCGCTGTCTTTGAGAATCATTGTCTTTGAGAAGATTTtaaccttctttt tttaatcatgGTCATTTTCTTAAACCTCAAACTCATCATGGGTCTCGAAC AATCCAATTAGCATTGAGATTAGTAAGGTAAAGAAAGAAGGGCTTCAACT AATGAATAGTCTGATTAATAGCCTTAAAAGTTTTGCAGCAGTGTCGTCCT TAAGCAGTATTTTTAAAAAAGCTATTagtcaggaagaaaagacacttttt ctTTCTGACTGACATCGCTCTACTTATGTATCGAGCACTGTATacgcccc ccagcggtttgcgtgaatgcgtgaatgcgtgaatgggcattttcggttgc gtgaatgcgtgaattgaaaaaacttgcgtgaatgtgaaaatccacttttt aactgcgtgaatgcgtgaatctgggctattttttgcgtgaatacgtgaat tttcccttttttccactgATTGTGTGCAgtgttcccgattttccaatgtt tctccgatttttcccgaaaattttccgattttctgaaaaattgggttatt gcgtgaaactcgaggaaaatttgcgtgattgcgtggtttgagggtccgct ggggggggggtggtGATGCTCGTATACTGAAGAAATACTTAAAGAAGCTA TTAGAAGTTCTGACCGAATCTATGACCCACTACGAGCTAAACATCATCTA AAGAATGATATTAAAATCATACGCCATAACAAAAAACAATCGTTCAAATC TTCCTTTGCAGGTCTCTCGATCACTGAAGACATAGCAGAACAGattgaag ttgaaaatgaagACAGCTCATTGATCCATTTCGAAAGTGGTCAACAGAAT AATGACCAAGGAAAATCATCAAAGAACTTAGATAACCTTTTACAGAAACC AACGCAAATTTGGAATGTTCCTAACGAGCTATCTATACACCCATCATCAT GTAAGGACATTCCTTTGTCAATCAAATACTGTTTGACGCTTGTTTCACAC CTTTTATTTATTAAAACTAAAAGCCATAAATGATTAACTCAGTGAAAGAT ACGAACATGATTCAATCGTTGTGAGAGGAGCTTAAAGTATTCTTGATTTT CACCATCGTATCAAATCTTCTTTGACTTATTCAATCGTAAACACTTCATA TTAAGTCTGATAACCATAAATGGTTAATTTAGTTTACAACTGATTTGAGG GGGATTCGATGACAGCTTCATTGTGAgacgaatacacgtttttttttata taagaacatcaaaaattttcgaagccttcggatgttcttagttttttgga tttgaagcctaaaaatgttcttaaaatgttcttattttcagcattttttg agaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNcaaagccttagtatgttcttagaatgttcttaaatttttgggcctcg aagccttatgttcttatatagtttgttcttataaaaaaaaaacgtgtaag tcgGGAATTTATAATATCGACAATTTTGACCAACTTTATCAAAACTTTCA TTTCCAGGCGAGCAATATACATACTGTGAGAGAGAAGACCGACCAGCAGA GGGAGTTTACAGACGTTTACCCATCTACCCTTGGTGGTATTATTCATGTG AGGGTAACAAAGTCAAATGTCAACCATGCCCCTCCACTGAAGATCTCGAT CATCCAACTTTATTCTTCTCAGAAAGATGCCAGAAATgtatttcagaatt taaaggtaaGTGAGACGGAGAAAGGAATGAGCTTATGTCTTGGGATGCTA AAATCCTCATTAGGCTTGTCTAGAACAAGCTTGGGGTAGACTAAAACACA TTTTTCATCATGCTAAGTTTACTGGCAATACAAGAAAACATTGCATTCGT CTTTTGCACTACTGTTTTTTACACACTTTTGGTTTTTGCTTATAACGAGA CATATCTGACGGTGAGGGAGACATTTTGTTTCCTTCGATACAGTACATAC ATCTAAAGTACGCAAAAGGTTTTTCACGTATAGATGCCAACGACGAAAAC ACCGTCTCTCTCGGGTGCTCTTTGAAGACACCCGTCACAAAAAGACAAGT GAGCGACTGCTTAATTAAATCTAATCAATATTCATTTTCGTATTCTTTCT ACATTTAGACGAGAAGATCGCATGCCCACCAAAAACTAAAGAAGGTAATT AAATTTCTCTCTATTTTTGTAGTTTTCGATCGCTTGCCCATTCATGTTAT TAATATACCGTTGATTGAAATGGGCTAATTTCGTTTGATTCGAAGAGCGC ATCTCGCTTTTAAAAAGAAGTCGTTAGGAGGAACTTATGCGTTAAGTTCA TTACCGGAGTAATTAGTCATTAAGAATCTAATTATCCAGGAAAGAATGGA GGATATTATAAATTATAAGAGAATGTCTATCGAGAATTAAAGACTCGGTT AAATATCTGCTTTAGGGACGTCCCGTCCATCCGGTTATATAGCCTATAAG AACACATTATCACTTTGAAAGCACCTATAAATTCACATAACGAGTTTAAA AATTACATAAaccaaaattgttaatttttttttttgcaccatAGATGAGA AAACAAGCAACTGGacgaaattgaaattgatgttTTGGTAAATTAGTGGA ATAATGATATTAACATCACGAAAAAAACGAAAAcagattttacattttac aattttattaccAAGAATCTTTTNATGAGAAAACAAGCAACTGGacgaaa ttgaaattgatgttTTGGTAAATTAGTGGAATAATGATATTAACATCACG AAAAAAACGAAAAcagattttacattttacaattttattaccaacaatct tttatatttttatttattcttcaaaagattttattaatttattctaattt ttttaatagcgaacaaggaaaaaatcattttagggTACCTGGTATTTTCT GGTATTTCCaagagagaaatttcaaatacaCACAAAACCAACGTTGAATT CTCAAATTGTTTGGACTTAATTCTACTAAGTtattgttttagaaaattta attctgtttaaaagaaaatatttttgttttatcaatttttatatATACAG ATATTgtaaataataacaaaaacagtttttatcttcattcaaaatatatt attttcaagCTTAATCCAAGAAGAAAAATAGACCCCCCCCTAAGAAGGAT AGCCGATGGTCAAAGGCCAAAATACTTTTGAAGGATTTCATAAGTTTAGG AGAGAGAAGGAGCATAATGTCTTGGTGACCAGGTGATATTGTAAAATCCA AATCTAAATTTCTACAGAGAGCTCAAGGAGGATTTTCAATGAATTCAAAC GAACAAATCTTTGAGATTAGTCAAAAACAATATCTCATGTCACAAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015650TCONS_00015650Clytia hemisphaericatranscript
TCONS_00015651TCONS_00015651Clytia hemisphaericatranscript
TCONS_00015652TCONS_00015652Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015651-proteinTCONS_00015651-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000215supercontigsc0000215:85839..91137 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0 0.26 0.18 33.49 22.7 17.41 16.9 8.45 15.16 5.07 6.37 9.16 8.81 26.59 12.08 5.53 5.13 8.08 7.12 0.69 0.45 0.32 0.47 0.75 0.49 0.47 0.13 0.1 0