XLOC_008806 (gene) - C. hemisphaerica

Overview
NameXLOC_008806
Unique NameXLOC_008806
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000216:188026..198450-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008806 ID=XLOC_008806|Name=XLOC_008806|organism=Clytia hemisphaerica|type=gene|length=10425bp|location=Sequence derived from alignment at sc0000216:188026..198450- (Clytia hemisphaerica)
ATTAAAATTGGAACGATACAGAGAAGATTAGCATGGCCCCTGCGCAAGGC
CGGGGGGAGGATCTTTGAGTCGATGGGGGGACGAACGAAAAATATGACGT
GGAAAAGGGGAAGGAAGGGGGAAGGGGGAAGGAAAAAGGGAAAGGAGCGG
GAAAAATTCAAAATCTGGCCTCGAAATGCGGGAAAAAATCCAAAATGGCG
GCAAATTTATCATCGGCACGTGTTTTCCATGTGTTTTTGACGTCTTTTTC
GTTTTATTGGCTTTTGTTGCATTTAGCATTAACCTAGCTGGGAATTGGAC
CCAGTTAAACTTGCCACAAGGTAGGTTTAGATTTTCATACAAAAAGAGGC
ATTTTACAGTGTCTTAACAAGTCACGTGACCAAAATAGTCACGTGACCAT
TCTAAAAATTACTAAGTCTTTTGGCTGAGAGCCCATTTTTTGACGTTTCA
ATCTCGAAAAAATACCTTTAAATATGTTGTCTTTGTCCTTTCATTGATAA
ACAGGTGCATTTAGCATTTCCCCTGGCTGAGAATTGAACTCAGCTTAAAC
TACCAAGCAGGGGGATTTGTTCTTGTTGTTGTTGTTGGTCGAAAGATCTA
GAAAATAAGAAAATGGAGAGAAAAACAGTGTTCAAAAGAGGTCACGTGAT
CAAAAAAGGTCACGTGACCATTCTAAAATTTACTAAGTCTTTTCACTGAG
AGGCCATTTTTTGTCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAGG
CCTTAAATAGGCATGAGAGTGAGGCTGTCCCAAGAGTCCGGATATATATC
AAAACAAACCATTTGCATCTAAACTCTGATATACAAACATATATCAGAAC
CTGAATTATTTCATTTTCGTTTTCGTTTTTACGTAAAATCTCTAAAATCT
GATAAAAAATGCGTATGAAATAAAAAACTAAGCTATTTACAGTTAAAAAT
AAAGACCTCACATATATTAAAAATATTATAAATAAATGAATAAACTGTAC
AACTACAAAACACTACATAGAGAAAGAGTTACATGAAAGGATATAAATGA
TAAACGATAACAAACAAAATCACCACACCAATGAATACAAATAAACAGTT
AGAAAGATAAACAGGCCACTTGGAAGAAGAAGGAGGAACAATTACATCAT
CAACGACAACAGGAACGACAACAGGAACGACAACAGGAACGTCAACAGCA
GGAACAACCACAGGAAGAAGATCAGGAAGAGTAGGAGGAAGAACAGGAAC
ATCTGAAAGAATATCTGGAAGGACAGCAGGGACAACAGCAGGGACAACAG
CAGGAACAGGAGGCAGATCAACAGGAACGGGAGGAAGGACACGAGGAGCA
GGAGGAACGAACAGGAACACAGGATCAGACATATTTAGGTGGCCTGTAAT
GTACACAGCATGGTCTGTAGTTTTTATTAATTATCTGTAAAATAGAAATG
ATATAGAAATACAGGAGTTAGAAGAAAGTCACGTGATCACTTTCACTTTC
GTTTTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAG
TCTTTTCACTGACAGCTTATTTTCTGACCTTTCCAAACTGAATTTAAATG
TCTAATTTCAGTGAGTTTAGAGGATATCTTCCTGTTAAATATAAACAAAT
TATACAAAAATGTACAAAAAATACCTTATAGGTGATTTAAAATCTATAAA
AATATAAAAAACATCAGCAAACCAGAACAAACGAACCAAAACGAAACCAA
ACATTTACGACAAAAACCAAATCAGGNAAATATAAAAAACATCAGCAAAC
CAGAACAAACGAACCAAAACGAAACCAAACGAAACCAAACATTTATGACA
AAAACCAAATCAACACAACCACAACCAGAACAAAAAACACCACAAACAGC
ACCAAACAGTATTTTTTACAGGACATTACATCAAGCCCCACCTCCTCTAG
GTCACCCAGGAATAAGGTGACCTGGTCTTGGTCTGATTCTTGCTGCTCTT
GATTCATTTTTATTATTTTCTGTAAAAGAAAAAAAGAAACGAACATGAAA
TATATGGTCAGAAGTAGATTTCTCCAAAATAAGTCACGTGACCATTATGA
AAATTACTAAGTCTTTGGGCTGAGAGGCCCTTTTTGGAGGGTGCAGAAAA
GAACAGAAAGGTCATTTTTCTTTTTTTCATAAACTATGTACAAGATAAAA
CCTAGAAATATGTACATTTTAAAAATATATGAACAGAAGAATGTAAAACA
AAAGAATGTAAATGTTAAAACAAAAGAATGTAAAACAAAAGAATGTAAAT
GTTAAAACAAAAGAATGTAAATGTTAAAACAAAAGAATGTAAAACAAAAG
AATGTAAAACAAAAGAATGTTAAACAAAAGAAGGTAATATGCTTCTTTAA
ATAAGTCACGTGATCACTTTCACTTTCGTTTCCAAGAGATCAGAAATTTA
CTAAGTCTTTTCACTGAGAGCACATTTTTTGACAATTTGCAATCCACTTT
CACTTTCGATTTGGACTATGCACAAAATAAAAGCTGAAACTATGTAACAC
TAAGGTTATGTACAGTTAAAAATAGTCCTAGATATATGCAGTCATATTAA
CATTTAAATACACTATAGAACACTATATAGAGTTAAAAAGCTTTATGATA
AATCTCACAAACAAGGATATATTCATTATATGTTTGTTCATTTGATTATC
ATAAATCAGTTCAATCTTTAGATTTGAGAGAGTCTATAATAGTAGTAGAC
ATTTAGACTGAGAACTGTCAATGTCACTTCGACGACAGATGAGATTTACA
TAATATGGTTTATGAAATACCTTATAAGTGTAAATATGTTTATCATACGT
ATGCTTATGTTTGAGTAATAAATCTAACCCTGCAAAGAAGATCATCATTC
ACAATATCCATCCCACCATACAGTTAAGTACAGGAGACAGAAATGTGGAA
TTAAAAACGTTTTCAACAACAACCCACTAGAAAAACGAACCAAACCCTGA
AAACGAGAAAACCAAGAAATTTGTTCTGTTTGTTTTAAAAGACCCACTTT
TATTCAATTTCAGACATTCAAAATGCGAAAAACAAGAGAAAAGGAAAAAA
ACGAAAAAAAAAAACTAAAAAAAAACTAATTGTTCTTTTTTGCCTTTTTT
ATGGCATCCCTCTTTTGCTTTTCACACTTAGCCCATGTCAACCAATCGTC
AAAAGATTTTTCGCACTTGACAGGGCAGTACTTTGGGCCATAGTACTGGG
TGTGGGGCGGTACACATGGTTGACCACACTGCGAGCAGTTGTATTTTCTC
TTTGGTTTAATCATGCCGGTCTGCGACTCCATTTGCTTGTGGCGGTAGTA
CGTTGTCTTAGACAAGGCGACAGGTGGCGCTGATGGAGTCGGTGAAGATT
GAGACTGACACGGCTGAGATGGTGATGGCAAAGACGAAGATAGAAAGGGT
TGAGGCGCAAGCGAAGATGAAGATAAGGGTTGAGGCGACGGCGAAGATGA
AGATGGTAAGCGTTGAAAGGGTTTAATGCAGGTTCTGGGTTGTTGCGTGG
AAGGTACAAAGAGGGCGGGCTGTACAGGTTTGGGTTTGATGGGCCTGTAC
AACAGTTGGTCAGTTGTTGTTGGCTCCACTGATGGAGAAAACAGAGAGGC
AGCAAACAAAGCTTCATTCGACGGCGGTGGTGGTTTCGGTTGATCTGTCG
ACTTCGGCTGTGATGATGGCTTCTGTTTTCCAGACGTGTTGACTGGCAAT
GTGAATGCCATCCTGGTACCAGCATCAGGGTTTGATTTCATGGTGGTAGG
AATCATTACCTTTGATGATTTGGTCACATTGCCAGGCAGCGATCTGCCCT
GAAGGAGGAGGCTGGCTTCGTCGCGTCTGGCTTTGCGCTTGTGCCAGTGC
ATCAGGGTGGTCTCGTTCACGTTGAACAGGTACATCTTCAAGGTGTGCTT
TAAGTCACTGTTGGAAACTCTGGCCTGCACATACTTGTAGTCTTGGATGC
ACTTCTTCCATCGGGATTCGTTTGTTCTTTTGTTCCCGGGTGACGTGATG
GTGCTGCTGGAAGTGTGCTTAGCCGTCAGGTGAATGAAGATGGCCTCAAC
TAACCGGTTCTTGGATGGACACAGGGAAGGGTAACCAGCAGTGACGTGAG
CTCGGCGCATGGCAATAATTTGAGCATTTCCACCCATCTTGTGCTTCCGC
TTGAACTTGCCCTTTGCCGGTTTCATTTTGACGGGTGCAAATTTCATTGG
GCGTTTGTCAAAATCTTCAAGCAGCCCAAACAGTCCAACAATCTCCTCAC
ACTTCTTCTTTGACACGCTGATGCCTTCAACACCAAGGAGTGCCCGGGCC
AGATGGTCGACACGGTTCCATCCGGGGATGCCGAGGGAGTCAACAGATTC
GTCCTCCTGATCAGGCTGGGACTCCTCGTTTTCCTCCACAACTTGCTGGT
CACTGGTTTCTGGAGGGACACCTTCATCAATTTCATCCTCCACACCAGAA
TCATCATCTTCACCAAGGTTGGATTGGATGTACTTGTCATCGTTCAGGTT
GACCTTTTCTTCTTTGAAGAAGTACTCCATGCCAACCAGCTCGGATGTGT
CATCAGAGGGTGCCTCCATTTCAACATACTGCTTCCCCAAGACGTGCGTG
TGAAGCTGGTTGAAACGGCTGGTCAATTTGTGGTCGAAGGTGCGAAAGTT
TGCAGGTCGTGTTCCAGCCTCTGGCAATGCTTCCTTCCGCGCGGTGTTCC
AGCGTGACAAACCGTCAAGGAGAAAGGCTTGGAAGTGAAGGCCATTCGCT
GATGTGCCTGGAATAAAATCACGAAGGTGATTGTGGAACGATTCCAGGGA
ATTGCTTCCTCGCGCACACCTGTAAATTGGAACGTCCCTATCCTTGCCTC
TCTTGATGGTTTTAACTGTCGTGTACAAAGGAACACCTTCCGGATCCTGG
ATACAANCTGCGTGTGAAGCTGGTTAAAGCGGCTGGTCAATTTGTGGTCG
AAGGTGCGAAAGTTTCTAGGTCGTGTTCCAACCTCCGGCAATGCTTCCTT
CCGTGCGGTATTCCAGCGTGACAGACCGTCAAGGAGAAAGGCTTGGAAGT
GAAGGCCGTTCGCTGATGTGCCTGGAATAAAATCACAAAGGTGATTGTGG
AACGATTCCAGGGAATTGCTTCCTCGTGCACACCTGTAAATTGGAACTTC
CCTATCCTTGCCTCTCTTGATGGTTTTAACTGTCGTGTACAAAGGAACAC
CCTTCGGATCCTGGATACAGGCGATGTGCTTGGTCTGCTCTTGCCAAATG
CTGACCATCTCGTCGTTGAACAGAGGTGTGCCCAAGACATCAGTGGTACC
TGTGAACTCCAGGATCAGAGCTTCGATACGGTGACGGGTTTCATACTCTC
CTCTGGTGCGTCGCTGACAATGCTGTAAAAGCTCTTTCTTCGTCAGCTCA
GCTTTGACGATGGCGTCAGATGCACGTCGCATGCCAGCATCTTGAAACTC
CTCCCTCTTCACTTGGATGAGCAGCTCCAGGTCTTTGGCATCGTATTCAA
AGATGCACCCCGAGAGCTGTGACATGAAGACACCGTACAAAGGATGGTCC
TTTGAAGAGCAGCCAAGGGCAATGCGCTCCATCATATGCCAAATGTCTAA
TCTCACCAGTAAGCCCTTCCATTCAACAAAGAGACTCTCAATCTTTGCTG
GACCAGATGTCGAGCAACAGTCTCTGTCGGTGTAGATGAGCTTAGGAGGT
GGAACATCGGCATTTTTAAAGCGTCTAACAAGACCCTTGGCCATGTCTGC
CAACGTGTCGTTGCTCTCAGAATGCACCACAACACACTGAAGGATGCCAC
CCCACTCGTTGCCGACGTTTGTAACCCACCGGGCAGACTCTCTGATTTTA
CCAGCCAGCTTTCGGATGATCTTGCCGGTGGAATCGATTTTCAGGATGGT
GCCAAAGACATTGGTGACATTTCCCTTTAAAATCTCCTGACGCTTGAGGA
CGTCGTGCGTATAACATGCCAAGAACCACTGGGCGGTTGGTACACGACAC
ATGTCTGGAAGCGGCTCGTATGTACTGGACTTCCCGGAGAAGAGTGAACC
AATCCCATTTTTGTGCAACTTGCAATCTTCCAGGTACATGGTCATCTTGC
GCATCCAATTCTCAGTGTGCAGCTCTGCGACGCTGTTTGCAAGAGCTGTC
GGGCTGTTTCCTTTCGTACGTGATCTCAGCAAAGTAAGCAGGGACTTGTC
CAAAGATGATCTGTACATGATGTGGGCAGGAAACTTACATTGCTGGGCCT
GAGAACACTGTTCGATGATAAGCTTATCCCAACCGATGAATGAAGCAGTA
CACACGCAGTCGTAGTGTTCAGTGGCCAGATAGTAAGTGTCTTGCATGTC
GATGACAAGACGCAATACGGGATAGATGCATTTGCGTCGCAAAAGTTTGC
CACATCCATCTCTTTGGCATCGCAGCTCTATACGCCACATGGTCAGCGGA
GCCCACAAGAAAAAATTACGTAGACAATAGTTGGCCGGAACTGGTTTCAT
GGCGGTTGAAGAAAGGGTAGGGGGGTGGTACCAGTTACGCATAGGCTGCT
GAAATGTGTTTTTGGCAGCAAACACATGACGACCCACCCACTCTCGGTCT
GCCGGTTCCATTTTCCAATCTTTTGGAGGGCGCAACTTGTAGTCCGTTGG
TTGACGTGGTCTTATTGGACTTGTGGGGGGCAGTGGAATGCTGTACACCG
GGGAAACTGGAAAAGCGTTTGGCAAGATCTCACTCGAGTTAGTGGCTGCA
CAAGGGGTGACAGGAACAGTTTTACGACTATGAATAGGCGAGTTTGGCGG
CGTAACTTTAAAAGATTGCTGCGATGAGCGAACGGGAACGGGCTGCACAG
TCAGGGGAGAAGGGGGCGACTGTGCAGCTGCGATTGACATGTCAACATCA
GCAGCTGACGGTGCGAGTTTAGTTGATGGCTGCGGTGAGCAATCGGGAAC
GGGCTGCACAGTCAGGGGAGATGGGGGTGACTGTGCAGCTGCGGATGTAA
TTGTCGACGACGACTTTGGTGAAGCCCACTTAAAAGACCGTTTCAGGAGT
GGCTTAGAAGGACCAGACGGTGGCGATGGACTGCCCATTGATAGTCTGGA
GGTCAACGGCTACGAAAAGACAATTAAGAAACTTAATTGTGACAATTAGG
AAACCCAAACATCCACCCTCTCCACGTAAAAACCTCCACGTTATATAAAT
ATATACTATAGAGAAAACACAGAAAAAAGAAGAAAAAGTAGAGACTCTCA
CCAGCTGCTCTGTGCGCAATTTGCTGGAATGCAAGGGCAGTGACACAGCA
GCAGGCGAAGACTCCTTCTTGTGGGAATACCCACACGAACACGTAAGGGA
TCTCCCTAAGAGATCCTTTCCTGACGGCGATTGGAAGACAGGACAAGCAT
CAATCTTGTCCCGTTCTTTACCCCAGGTGCTCGACTTTGTCGGATAGCCT
CCATTTCTGAAGGCGTCTTTGTTTTTTGCGGCATAAAGCTTCAACCGTGC
TTTCCACTCCGCAGGATGTTTTGCGGACTTTGGCATTTATTTTTAATTTT
AATTACTAGAAATAAACCAATCAAGAGTATTTTAGAAACATTTTTCCAAA
CAAGGATTATCATTTATCCAGAAAAAACCACCAGACCATCATAACAACAT
AAACACAAACCAGCCAGCCACCAGCCAAATTCAAAACTGTTAAAAAAATT
ACATGTGAGCTAGCCACTGTTTTGAAAAACAAGAATAACCTGCACTCGTA
GCAACTTTTTCATTAGAGTCACGTCACGCGCGTCAAAGATTTTTCTACCT
TTCGGCGCCAAAATGAACTCTGCCATTCATTGCAAATTCTGATGAATTAG
AAATTTAGAGAAATTAGAAATGTTATTTTGAAAATTGAAATATTTGTTGC
AGAAATTCAAATGGCAAGTCTGGTGGCATTTGGCTATGAACTTTCCAAAT
ACTATTCCATATATTTTGTATCTATTGTATTCTCTTTTTCAATGGAGTCT
CTAATATGTCTGAAAAAGAATGCACAATACAAAAGTAAGAGGTCCCCTTT
TTTCAAATACAGATGAACAGGAGCTTGTGGAACATAGCACTTTGTGTCCA
TAAGTGTGCTACTAGATAGCACACAATTCCTTCCTGACTAATTCCCTTTG
CGTAAGCTTAAGCTAGTAGAGTGGAAGGCTTCAGAGTGTTGTCCAACCCC
TTTTGAATAGTATTGGAATAAAGATAGCTCATCAAACCAAAGGTTAGTGG
ATTTTCATACATTCATACTGATTTACTGATTTCAACCTAAGTTCTGAGCG
TAGGTTGGGAACAGTAGCCTTATATATATTGAAGCGGGAATGTTACGTAA
AAACATTATATATAATAACGTATGTATAACCTTTATGAATATCTTCTTGA
AAAATATTTCATTCACCTTCAAATTCACATAGGAACTGCACTTCTATATG
CTTAATCAATCTCTGGTAGTGGTTTGTTGTAAAAAAATTTATTCGCGACA
TTAAAAAATAAAGCGACTTTTGATAAAACCGTGAATTATGGCATAATAGA
GAAAATGATCTATTTTGTTCACAAGTCCATGAAAAATGTTTCAATCTTCT
TCAAACTTACACAGGAACTGTATTATATGATGCTTTGTGAAATTCCATTA
GTGGTTTGTTTTAACTCGGTCCCAGTCCAATGTAAAAAATCAACTTGACG
GCCGTCAACAAAGCGAAAAACGACTAAGTCCAGCAAAACATCATTTTCAG
CCATAACTTTACCAAAAATGTTTCAATCTTCTTCAAACTTACACAGGAAC
TGTATTATATGATGCTTTGTGAAATTCCATTAGTGGTTTGTTTTAACTCG
GTCCCAGTCCAATGTAAAAAATCAACTTGACGGCCGTCAACAAAGCGAAA
AACGACTAAGTCCAGCAAAACATCATTTTCAGCCATAACTTTACCAAAAA
TGTTTCAATCTTCTTCAAACTTACACAGGAACTGTATTATATGATGCTTT
GTGAAATTCCATTAGTGGTTTGTTTTAACTCGGTCCCAGTCCAATGTAAA
AAATCAACTTGACGGCCGTCAACAAAGCGAAAAACGACTAAGTCCAGCAA
AACATCATTTTCAGCCATAACTTTACCAAAAATGTTTCAATCTTCTTCAA
ACTTACACAGGAACTGTATTATATGATGCTTTGTGAAATTCCATTAGTGG
TTTGTTTTAACTCGGTCCCAGTCCAATGTAAAAAATCAACTTGACGGCCG
TCAACAAAGCGAAAAACGACTAAGTCCAGCAAAACATCATTTTCAGCCAT
AACTTTACCAAAAATGTTTCAATCTTCTTCAAACTTACACAGGAACTGTA
TTATATGATGCTTTGTGAAATTCCATTAGTGGTTTGTTTTAACTCGGTCC
CAGTCCAATGTAAAAAATCAACGTGACAGCCATCAACAAAGCGAAAAACG
ACTAAGTCCAGAAAATCATCTTTTTCAGCCATAACTTCATTAAAAATGTT
TCAATCTTCTTCAAACTTACACAGGAACTGTACTATATGATGCTTTGTCC
ATTCCCAGTGGTGGTTGTTTGTAAAGATATCCTTGTCCAGTTCTAAAAAA
TCAATGTTTATGCTGAAAAATGACTAAGTCTGGATTTAGTAGAAAATCAC
TCATAATTTGATGAAAACTTGAGCAAATGACTTGAAACTTTTAGAGAATG
TTTAAAAGAATGTTCCTGAAGTAAAACCAGGTTTACTTCTGTTTAAATCG
CAGTCTTAGAGTCACTTGAATAAGATGTAAAGTCTGAAATTCTAGCTACA
GCTAAAAAGCTGAGAAAATCAACTCCGCCACGGCAGCCATTTTGTTTTTA
TTTTTGGACCAATAGATTCACGGGATTTAAGATATGAAATAAGCCAATAG
AAATAGTACATTTGGAACTTTGGAACTAATCGGAACTCACGGAGCGATAT
GATTGGTAGTATTTGGAACTAACTTAAGGATGACACGCAAATTCGTGAAG
CGTTCCAAATTTTTTTAAATTTCCATCCCGACAAATGTCACGTACTAACT
ATTGGCAAATTCTCTGACATCAAGCATGCCTATCCATATTGTTTGGATGG
AAATCAGCTTGAACATGTTTTTGAAGAGAAAGATCTTGGGATTGTGATCG
ACTCAGAACTTACATTCGAGGAGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015768TCONS_00015768Clytia hemisphaericatranscript
TCONS_00015767TCONS_00015767Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000216supercontigsc0000216:188026..198450 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.89	9.87	21.29	37.16	4.76	1.7	0.12	0.29	9.19	7.66	5.66	6.95	7.32	15.8	1.63	3.75	0.09	3.55	4.71	12.54	5.05	6.23	13.37	6.02	0.38	2.45	4.45	2.25	7.47	14.89