XLOC_008887 (gene) - C. hemisphaerica

Overview
NameXLOC_008887
Unique NameXLOC_008887
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000222:345495..348860+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008887 ID=XLOC_008887|Name=XLOC_008887|organism=Clytia hemisphaerica|type=gene|length=3366bp|location=Sequence derived from alignment at sc0000222:345495..348860+ (Clytia hemisphaerica)
tacagcTTTGGAATCAACCAAGGGATGTTCAGCTCACCAAAACAAGCACT
TCGATTcctgtaagattttttttttcgatcttGTCACATACAGTACccaa
attgattgaaatttaaGGGTATACTAATAATCATTCATATTTATAGTTAA
GATACAACattgtataaatattttttattcccactgaaattgtaatttaa
tcaaaattaacaattttggcggggattaaatttggcgtaTTTGTCGGTTT
AGGCTATATCCACCAAATTAATACGGCTGCTGATGATTTTCAGAACTGGC
TAACCGCTTAATGAAAGACCTAAACATAAAGATCAAATTAATTGTTAACA
TTTGTGGACACTAAAACATCCAATGTCTTAGATAGCACAAAATACTcgca
aaacattttaagaacatttgaacacttcaaactaaaaaagttacaaaata
tctgaaggcttcaaaattttttgatattcctatataaaaaagtgtagcTA
CCAAAAATGCCCCAAACTAAGTACACAAGTAATTCCTTTGTATGGAACAT
TAttatattgaaaatttctcttttatttCTACAGAGACGATCTACCTGCA
CTTGAGCGATATCAGTATGTTTCCATTTGATTTATCCAAGcaattcttca
taaaaaaatatatcatttatcGGTAGAAAATATATTATTCGTTGACAGAC
AGTGATGAGAAAATCACCTATTGAcgaatttttacaaaagtttttgttAC
TGTATTTTAATCACATTCTgttcagtagcgtggtgggtagaCATAAAGTT
GGAGAGGCAATTTTCGGAAATTGGGATTTTATCGCCCCCTTTTAAAAGTA
AAATGTCTTTGTAAAAATGACGCGGGCGAATgataatttttctctttttg
actGAAAACTGTTAATTCTAAGGTGTAAGAAAGCAAAGGGACGCCAAAAT
TAGTACAGTGGAACCTCttattagcggacaccatcgggggaaaggggtta
gtgtccgctaattagaagtgtccgccttttagaaacttttgatctcggag
ctccaattttgaaattaggccatcccagggtgtcgaaaatacaaaattgg
ggtctaaagtacttatctggaGACATTAGGCCATAGAAGAGCTCGAGTGA
CTGGCAAGAGGTTAAATCGAGGTGGTGGGTACGGACTTGAAGTACCAGTG
ATtttctttggcccacctaaattcgttgaatgggtcaagggaaaactgga
aatttgtagaaataatctgaaaaataagactaataagtgcttgaaataaa
aatatctaatatcaataattttctttttcaattttggacgtctgtgaccc
gtttgatattcaatgtccgctaattggagagctaaaataggggttttggc
catttcgtgcgaaaaaatttgtccgcTAATCAGAGGGTCCGCTAATTGAG
TGTCCgctttttagaaacttttttatgaggatttgactaggaaacggtcg
gggaaaatgaaattgtccgctaatcagaggtgtccgccttttagagtgtc
cattaattagaggttttactgtaatTAAAGTCACCTTTTCCGACCCTTGT
CTTTCGGCGCCCCCACCACCCATAGTGGTCCAGGTCAGGGTCAgggtccc
aggcaaaaaaataGGATGGAAAAGTAAGGAaataatgcgagcgaagcgtg
CACAAAAATTTTGGGCTGTTTACTctcttttttggataaaaacgtggtga
tataaaaaaaatagaagaaatagtCAGCCCCCAACTTTGCCATTGAAATT
CCAGGCCCCCTCAAACATATCAGGTCCCCAAAAATATTTGGCTGTATTTT
AGCTCCCGGTTTTCATTTGCATTTCTTTtggtgtaacccccccccccgaa
aagCCAGGGGAGGTTGACGCtatgccaccacgctactgattTTGTTATTA
TTTCTTACATACTGTAATTCATATGTAATTCAAATTCCCTTCTATAGTCT
TATTCAAGATGTTGTATTCAAAGGCCAATTTCCCTTCGGAAGTTCCAAGA
AAAAATCAACCGCTGATGAAAACTCCACAAATTCCAGTGTTTCTACAATG
AGTATCTCTAGGTATAAAGTTTCTTTTGTATGTtgtaatttttccaaaag
catAATTTTCCCACAAGGAGTTTTTTAATTGAGTATTAGAAAGAACTCGT
TTCTCAGGCTTGAAAAAGTAACAcgtatttttatcgttttttcagtagta
aacgtACATTGGATGAGGGTTCAAAAGATACGAACAAGAAACCTGTTCAG
AATGatgaaaaatcatcatcatcatcatcatcatcatcatcatcaaagtc
atctccaaagttaaaaaaatgttcAGAAACAACCACAGAAACCTCTAAGA
AAGATGGTAAGCCCGatagaaagtttaaaaaaagttttttcttcctTGTT
AAATTTCTTATCTTAGCAGAGACAGGTTTTGAGGTAGGCTTGAATAAATT
TATCGAATACAATATCAAAAAGATTGGAACCATAAAACAACTCAAAGGAC
CAGGGGGTCATGATTACTATAATTAGTATTTAGTGCCTTTTGAGTCCAAA
GTTCtacaccaccaccctttgaaTTTAATACGTATCTTTAATAACTGCTT
TTcagttgaaattttgcatacaCCACCCGCCTTTGTGAGCCTTTTGTCCC
CAAAACGGTGGTAGGTCGGTTAGTAACGCGTCAAATTTGAGGAAGTTTCT
TTGGCTGTTTGTCGTAGTAattaaaattcaataatttctttattttaggA
CAATCTGATGTCACGACTGCTCAAAGTATCgataattcaattcaaaactc
tAGCATCGATCTTACAAGAAGAATTCGATTCACCAAAAGCGAAGAACAAC
AATTGCTGGATGGTGTTAAGGTACACGGGACTGGTAACTGGTCAAAAATC
CTCGAAGAGTACAACTTTCATCCATCTAGGACAAATGTCAGTTTGAAGGA
CAAATTCAGATTGTTAAACCAAGGAAAGTCATGGGAAAACAAAACTCGCA
AATCTCGAGTTCGTTTTTCTAAGAGAGAAGTTAAGAATCTGTTAAAAGGT
ATAAAACGTTACGGTGTTGGTAAATGGGCTAAGATTGCCAAGCATTATGA
ATTTCACGATTCAAGAACCAACATTAGTCTTAAAGACAAATATAGAACAT
TGCAAAAGCAAGGGTAATTTTAAGAAAGATTGTGCCAGCACggaaaatat
tcaatatttcaCATATTTTACGCATCATTTTTTAACAACCGCGCCtttgt
ttcattttaaaacagatgtatattttctttacttttttcctTTGAAGAAA
ACAAATGACTTTTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015909TCONS_00015909Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015909-proteinTCONS_00015909-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000222supercontigsc0000222:345495..348860 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16	0.24	0.12	0.17	0.2	0.31	0.85	0.96	0.83	0.93	0.85	0.36	0.05	0.03	0.24	0.29	0.33	0.19	0	0	0.09	0.29	0.06	0.24	0.32	0.23	0.36	0.79	0.26	0.36