XLOC_008939 (gene) - C. hemisphaerica

Overview
NameXLOC_008939
Unique NameXLOC_008939
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000224:244329..249960-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008939 ID=XLOC_008939|Name=XLOC_008939|organism=Clytia hemisphaerica|type=gene|length=5632bp|location=Sequence derived from alignment at sc0000224:244329..249960- (Clytia hemisphaerica)
CTAGAATCTTAGATTTCATTTTGTTTCAATATAGTATGTCTTCACTTACT TTTACTACAGGGCTACTTTACTTTTATGTTTTTGCCTAGTTTCATGACAA ATCTTATATTGTTTCCATTCCAGTGAAAAATGTAATGACATAGAGATATA CAAAAAGAACTACAAGGAAAAATACAAAATCATCAGTTATGGAGAATCGA AAACGACCTGGCTCTGCCTCGTCGTTCGCACCTTCGCCGTCGGCATCCGA AAGTGCCCGCGCGGACTCTGCAAAACGTTCGCGCTCTAACGGTTCGTCTC ACTATTCGCCAAACCCACCGTCTTCAGAAAGATCAATGAAAATCGATGCT CAGAGTCCGAAAGTTTTTCGAGATGGGGCACCGCCCGTCACGCCCGAAAA CAAAAGGGCGGGATCAGTGGTGTCATCCACGGGCGGAGCTCCCAATCCAG GACATTTATATTGTTCAGATATGATGAAAACAATGAACGAATTCCGAGAG GCGAACATTCTTTGCGATGTTACAATGTGTGTGGGTGGTAAAACTTTCAG CGCCCATCGCACTGTATTGGCGGCCGCCTCGCCTTACTTCAAAGCTTTGT TCGCCAGCACACTTACCAATTCGTCTGATTCCGATTGTAAACCGGTTGTG TTAACCGATATTGATTCAGATTGCATGGGAAACTTGTTAAACTATATTTA CACAGGAGACATTGAATTAACCCAAGAAAATATTAAAGACGTCATTTCAG CGGCTAATTATATGCTAATCACCTCATTAAAAGAACGTTGTACCAAATTC TTAAGGAAAATTTTAACACCCAAAAATTGTTTATGTATAGAAAATACCGC ATCACAATATAACTGCGATTTATTGAAAAGCACCGCTACGAACTTCATCC GTGAGAACTTTACGACGATTGCGGAAACGAACGAATTTCTTGAAATGGAT GCGGAAAGACTGAGTGACCTGGTATCTAGCGATGATACGAAAATAGACCG CGAAGAACAGATATACGAAGCTATAATGCGATGGGTTAAGCGAGAACCTG ATTCGCGTCGCGAGCATTTTAAAGAGTTAGTGTCTTACGTACGTTTCCCG TTGATATCACCGTATTATTTAATGGACCATGTAGAGCAGGACGAAATCGT TCGCTCAACACCTGAATGCATAGCTCTCCTTTTGGAAGCTAAGAATTATC ACATGCTACCTGATCGCAGATGGCAGTTAAAGAGCACGCGAACGACACCG CGTACTTCGATGGGAATTGTTAACGGTATCATAGCAGTTGGTGGGATTCA AGGGCCATGTAAGTTTATTTGACAAAGTGAAGTTTCCGATAATTTAATGT CCGCTTTTATGATGGGATCATATTTGAGAATTAGAAATTAGAAAAATTTC TCAATTTCGCATGATTAGATTTGAAATATGTTTCTTTCTTTCAAATAAAC GATTTATTACTTTCACTATGCATGGAAAACGCTACCTGAGTCTGAGTATC AAACTATTATTTCAAGCCTTCTCTGTCATAGGTTCATCAGTGGTAGCATC AACCTCTTGCTATCTACTGTGTCGTAACCAATGGTTTGTCTTGTCCAAAA TGCAAACACCGCGATGTCGGCACGGTCTGGCCGTCACCGGCGAATTTGTT TACGCCGCCGGGGGTCAATACCGAGAAGGTAATATTTTTTTACATTTAAG CGAAAGTAAAACTATGTTTACAACTGGGTTTATGATACATTTTGATCTAG AATCTGACACTGTCCGACTTCAAAAGTAGTCAACTTTGCATATTTTTATC TTTGAGCACAATTCTAAGGAAGGGTGTCTTTCTGTTCTTCTTTGGCTCTT AAACGTGGAAACGTTAAAAGCCATATAATGGCTCATTCCATTTTATATCC ATACAGGGGGGGGGGGGGGGGGGGAAAATTTCCCGGGGAAAAAAAAAAAA ATTTTTAGAAAAAAAAAAGGGGTAATTTTTTTTTTTTTTTGGCTTTTAAA AAGGTTAACGTTAAAAACCTTTAAATGGCCTTTTTTTTTTTTTTTTAAAA AGGGGGGGGGGGGGGGGTGGGCGAACATTTCCAGAGGAATAAGAGAAGAA TTTCTAGGAAGTATAAAGGAGTTACTTTTTATTTTTCTAGGGTAAAAAAG TTATCCTAAAATTTCCAGGGGGTTAAAAGACCGATTTTAGTTCGTCCACC CTCACTTTAAAGGTATGAAAAGAATTTTTAAGGGTTACTTTTCAAATTTT GATATTTCCAGGGGGTATCCACACATTTCTAAGAATTTTTTTTGCCTTGA AAAAGGTTCGTACACCCCCCCCCTGTATGGAAATTTAATGGAACGGCCCA ATACCAGGTCCCAGTAGCCTAGTTTTTTAGTTTTCTTTTTGTTTGTCTAG TCGTCTAGTCTGTTATCTCTTAATCTTCTAACAATACTGCATTTGGAGAA AAAACAATTCGATTAAGGGGGTGGAGGATAAACATTTTTTGGAAATTTAA CCCACCGGACTCTGTGAAGGACCGCCGGACATTCAAAATCACCCCTAATC AGAGCAAGTTTGCCCCTAAAACAAGGAAAATGTTGCTGATTTTCACCATG TACAAAGATTTTCTGGAAGAGCCCATTATGATATTCTAAAAAAGAAAATT GAAAAATAACGTAAACCCTCCAATTTACTTTACTTTTCCAAAAGGTGCTG CGCAAAGTTCACTGGCAAATGTCGAAAGATATGACCCTAAAACCAACACT TGGAGTTCTGTCTCTCAGATGTTAACGAGAAGAAGTTTGTTGAATCTGGC TGCTCTGGAAGGTTAGTACCAAAGATACATTTTCTCGAAATTACTAAAAA GGACCAATTTGCTTTATCATCTGGCATCATTCCTACAGACACGATTTGCT CTTAAGGTTGGACGAATTTGGTAAATATGCCTGCTTCAGTGTGGGAAGCC TCCTATACGCCACCGTTAAAGTGTGTAAAATCTGCTCTGTTGTCAGAGGT TATTTTTTGAACTACCGAAGATTCGAATCTTCTGGCTATAATCTGATGCT TTGATCGTCAAGACGCCAAGATTTGATTGGTTTAAAGAAACGTTTCCCTT CCTTACCATATGATAGGTTTTTTGTACGCCGTCGGCGGTTGTGATGAAAA CAATATGCGTTTGAGTAGTGTGGAACGATACAACCCAACAACGGATAGTT GGAAGTTCATACCTAACATGTCGACCAGTAGAAGTTCACCCAGTGTGGCC ACAGACAAGTACATTTACGTTATCGGCGGTGTCAGTTATGTAGGTGAGGA TCATATTTACTGTAATAAAGTTTTTCAGTTTCTTTGGGATTTTAAGAATT CCTATCTTCGTTGTAATGTTTCTAAACTTACTCTCGGATACCTATTAAAT GGGGGTTTGGAATAAGCTGGGAGGGTGGAAAATTTTTGAAAAAGAGGCTA TTACAACGGAATTAGGACAAAAGAGGGAACTTTCAAAAACATTTACCCCA AAAATCAATAACCGGGGTGGGGGATTGGAAAAAGAATGTCCTGGGTGGAA ATTTTTCGAAAAATTAACTAGCGCCGCTTTCCAAACGCTAATGTTTCATT AAAACCTCAGTGTACAATGCAATAAAAACTGAACAATTCAATATTCAAAA CAAGAGCAGTGCGCGAAAAGTACTTAGGTGCCAAATAAACGCCCNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNCCCCCCCCCCCCCCCCCCTTCAAAGGACCCTATTAGGACCCCCCGTTT ATTAATTTTTGAAAAAATGCCCAGCTACCAAAAGGAAAGCTCGTTGTTTT ACGTTGTTTTAATTTTCGCCTTTGTGTGACAGGTCCTCTTTTTCCACCTT GCAGGGATGTCTTTGAATTGTGCTGAACGTTACGATCCTCGATTTAATAC CTGGCAACGGATTGCATCCATGAACTGTTGTCGCGCGAGCGCCTGCTGTG CTGTTGTCAATGGAAAGATCTATGTTATAGGTAAGTTTTATGGTTAAGTT TCAAAATTAATTTTTTTTTCGGGTTTATAAAACAACTCATTTTCGCAGTT GTCATTTGAATTTCTTTCATTTTCCTAGGGCTTTTGCAAAATCATTATTG TAAAATTTTCGCGAGAACTAAATTTCCCAAAAATTCGCGAAAATTGCGTA AATTAATTTACGCGAAATTAAATCTAGAGCAACGACCTCATTGTCTAAGT TGAATTTGTGAGGACTTCCCTTTTACGTGAATATCTTATCTTCCAAATGT TTTGACTTCTAAACGAATCTCATATCGTACTCGCAATAAAAAAACAAATG TGAAAAGTCAAATAGATCAAGTTTTACTTTTTCCTAATCATCTTTTTACT CGTTCTTAGGTGGTTGGGATGGAACGACGCATTTGAACTCAGGCGAATGT TATGACCCAGAACTAGACAAATGGAGTTTTATATCGCCCGCGCTTTCCGC TCGTTGGGACGCGGGCGTTGCTGTCGATTCTGAAAAACTTTATTTAGTGG GCGGTTGTGATCGCAATGCGGTTTGTACACTAGAAACTGAATGTTATAAT ACAGAGAACGATACATGGTGTAAAGTAGCTAGTCTACCTGTCGCTACTCA CGGTTTAAAATGCTGCACGATTCAATTACCCAGTAAATTTGTATAGGGAA AATATAATTTAAGTTTTATCTTTAGATTTTTATTTTTCGCAGATGATAAT TTCTCCAGATTTGTGAGTGATAACTCGTTTACTCTTTGGTGCCTAATAAA CGCCCCCGCCCCTGTTTGTTAATTTATCTACCTTATCGGCCCTTTTTACG CTGGCCCTTATTGGCGTTATTCTTAGGCTCTTGGCGTAATAAGGGTCGGC GTTAAAAGGGCCAAAATTTTGCAAATTTTACTTAAAAGTGATGTTAATTT TTTACCATTTTCAATGGAATTTTCACCAGTTTACTACTGAAAATGATATT TTAATGTAAATTGAAGCATAAATAACCATTCAAACAAATTTTGGCGTTAT TTACGCCCCTAATTGGCGTAAGCCCAAAAATGCTGTGGCGTAATCAGGGC CGGCGTTGAATTAGGGCCGGTGTAAAAAGAGCCGATGAGGTATTTATTTC CAACCCCCTCTTTGGAATCGTCTACCGGTACTTTGGAGAGTTACTTTTGT ATTCAAAAAAAATTAAGTTGAATCTAGATATATACAGTTTACTCTCTCTA ATTCGATCTGCAAAGGATCTCAATTTTTCCAGCTGAGGAGACCAATATTT TATTTCGAAGTTCGAATTAGAGAGAGGTGACTTTAAGGTAAGNGAGAGGG GTGCCAAAAAAGCTTTTCAAGGGGGCGCCAAAATTTTTTTTGATGTTTGG TTGGGCGATTTGGCGCCCTTTGACACGTTTTTAGCGCCTTCTTTAAGTGC AATGTAAATTTTTTTTCACCTGCGGCGCTTCATTTTATTTTACGAATTTT TTCAAAACTACTATCAACATTGAATTGCGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016005TCONS_00016005Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016005-proteinTCONS_00016005-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000224supercontigsc0000224:244329..249960 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29 26.21 7.25 4.2 52.23 34.08 20.6 21.27 9.2 14.23 8.71 6.72 6.66 6.9 8.16 9.43 14.43 11.38 5.41 5.03 9.7 9.33 31.09 28.76 13.2 14.08 7.06 5.23 17.52 22.18