XLOC_009003 (gene) - C. hemisphaerica

Overview
NameXLOC_009003
Unique NameXLOC_009003
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000226:283073..289436+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009003 ID=XLOC_009003|Name=XLOC_009003|organism=Clytia hemisphaerica|type=gene|length=6364bp|location=Sequence derived from alignment at sc0000226:283073..289436+ (Clytia hemisphaerica)
GTGAAAAATGAATTTCTCATCAATTTTAGTTATTCCTACGTTTTTGACAA TAGTGTCATATGTAGTCGCATTTAAATGCAAAAGGAAggttagttttttt cacttttcatacAAATTTCTTTCCAATTGAATTCGTATCGCTAGCTGTAA GTGTTTGACAGGGTAAGCTAGAGAGTCAGAGGGCTAGGACCTTTTTCCTA GCAGAGCCCTCTTGATAAAGGGCGGAGCTTTTGATAAAGGGCGGAGAAAA ATAAAGGGCGCCGAAAAGGCTTTTGAGATGTCCCTCGTAAaaggttttta ttttctaattcaTAAACACATACGAAAACTTTATTTATCATTCAATCGAT ATATTTCTCTCACTCAGCTAGAGAACATACAAGAAGCGTAAATATATAGT CCgtatatacacgtttttataagaacatacaaaattctttaagccttcgg atgttcttaacttttcgagttttaagcgtaaaaatgttattaaaatgttc ttaattttgccattttttgagtctttttgccaattttcctgagaaattgg ctgttttcgagtccgcgaagtcttaaaatgttcttaacttgttcttaata gtttggccatcgaagtcttatgttcttatataatttgttcttataaaaaa acgtgtagtatccAATCTCGTACACAGATCCACAtacaccactttttgat tttactgatggacgtgatacaatCAACCTTCATAagtgctatcagaatca taaaaaaacgaGCTAAGGGCCTGGTTCGAGCTTTGTATAATATACACTAT GAAACTAATGTACAGCACCTTATTACATGTAACCACCATATCTTTGTATA CTGTGGGGTGCTCAGGCGAACATTCAACACcctaaaatataaatttcact CATTAATTTAGGTCCCTGACAATCACCATGGAGCTCCGTCCCACACTGTC ATCAAGGAAGGTACAAGTTCTTCAACTATTCATGGTTTCTCAAAACTATT TGATTATTATCTGATAAAGTGGATTCAAATGGAaacattaaagggacata aaagtattgACGAAGTTTGttaacaaaccgtatgcagctaacctgagatc agattgtgaatgttttcagCACACTaagtacgctgaagctctaaaagggg ggggggcgtacagTATTTcagaattgcggaaatcgacccttttttcttcg gaatttcggaaatcaggcaGAATTCTTTCGGTATTTTGGAATTCTGAagt tgtttcggtatcggaaatccattaacttttgcttcgaaattccggtatta taaagtttttatcccactttttaaaaaaaaaatcaaatttgatgaataat tagtcaaaacgaggaaaaatactccaaaaaatcggtatcgaaattgcaag tatttttttacggaatttcggaaatttagGCAAAAtcattcggtatttcg gaaattgcAAAACCTCGTACGCCCCTCCCTCTAAAtggatgtgtgaaaac ataatAATCTGACGAacatgcaatctcgaaatcgtaaggaccgcgttcgt ctaaaaggactaggaacgacAATAAAGTTGCGTggttgtgtttatgaata gggcgccgtatcagtttttaactttccggTGCACTaaaagattcttgttg tagaattttccgcgaaaggactattttcctcagatatataattttcaatc gccttcagaggtttaccgtgcgcgtaagaaaattacaaACATCTGTTCAG GTTATATGCAGCaggataaaaaatcaaaacaaatgtcacatgtcaaaata ataaatcaaaaaatgaatatataaacgactggacatcaggttatatgcag cgggatacaaaatcaaaacaaatgtcacatgtcaaaataataaatcaaaa aatgaacatataaacgactggacatccatctcctttgtatttttgaagat aactcTGCTAGCTttgttgccgcctcgttaaaatcatcaaatgaaacaat aaattttgatggtatacctcttgggaataccttgctaacaacgtcaaaac ttcgacaaaagtctctgttgttctacctcaggcaaattaaggcacgtcca aatttatcttaattttttatcaaagtttccacttgtcatagcatatcact tcatacatcgaaagaagcgtattggagtgtagatcactggaatagctgtg ccatgattaatttttttacccaaaaaagatattagacaaaaaccaaaaaa tgctgacgtcatcaaaacttgttttttgaataacttcagtttggcttatg gtataaacatgaaatttggacaaaagttgcatatcaacaataggaacatt tttgcataattttttttgcaaattttgccgacgtcagcagaaatcagcaa aatacgaaatttttcaattaagtgctgacgtcagcaaaatttcaaaattt ttttttcaaaatgatccttttaatggtgtgcaactttggtccaaatttca tgtttttaccataagccaaattggagttattcaaaaaacaagttttgctg acgtcagcattttttggtttttgcctaatatttttttttgggtgaaaaaa ttaattatggcactGCAATTCCAGTGATTTACActccaatacgcttcttt cgatatatgaagtgatatgctatgataagtggaaacggtgataaaaaatt gaggtaagtttgaaaaatctggacaggccttaattgggaggtcgtcagta gtccgaccctttctagtccgacagtaaaaatgtccaaCGTTgggtttgac gaatgcgtcagtattccgacaacaattttgtccgacaacgagtcaaaaaa atcatataaaaaacGTAATATGAATCGcgaggcacatcttttataaaaat ccaaagttccgattttgaggttaggcccctaaacccgacttttcttaaat tttgggaagcttgttaggattaggctttcaagagtcaagaaataggattt agctgtttttacgacccttctttaGTGATTGACCCTGTGACCCTGATTgt tcctttatttctaattatatCAAAATTCCGCCAAAATGagcttttattaa tattatctcagtgaaaaacccttattcaacattcgacactctaaaatctt tcgttttcggacaaaagtgacgtcggaaaaaaagacttccaNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgtgacgtcg gaaaaaaagacttccaaattttaaatttattttatagattcggactattt tactgtcggactagaaagtgtcggactagtgacatgcacccccttaattt gcctgagacttttctcaagtcttttatctatatcatgaCAAAGACAACAG AGGCAAAAttatcgtcagcttgtcaaaattcCGAATTTGGACTCAAAAgt ataaaataattttacagAGTATGGGCAACTGGCAGACTATTTTTTCATAt gtcataaaaaatttttttggagtGACAAAAGTAATTCAAAAGTaaacacg cagttgaaattctacATTTCTgcgttgaaaaatgttgataaaatatgttg caaacttatgaaaaaatgtagaataattattttttatttacctaagtaat tcaaagaaatgaaattgTGACGGAATGTTGgcggattttttataccaatt ttgatatacaggcggcaacgaagctcgcttcaaagacacattggaagata gacgtccagtcgtttatatgttcatgataaaaataaatatggctgatttc aattgtttcaattgtttcacACGAGTTTGTTtaggacacgtgattttaat tgtacTCTTTAGagtgacacgtggttcgcgcaatgtttacattttacagg gtgtccggaaaaaaagtatcgaatCGTACCACTACTTCTATAGggagaaa gttcttgtgtgtgtttcattaaatttgcaatgtttatcaaagtttctctc tatCTTAACTTTTTCTCCTTGTCAGTACACAAAGTTCCAAACATTAAACA TGACTACTTTCTCTTGGAGACAATTGGATTATCTTTGTAACGCGCCCGTA CTGTACAATGAGTACTTAATTACAAAATTATACGTTTTACAATCGATAAG TCTTTCGTTACGTCTATGAATCATTCAATCTGTTGAACAATTTCAAGACT TGTTGCGTTTGAATTCTTCGATATCTCTTCCGTTTCTCGGATTTCATAAC TAAACGTAACCTAAGGGACTCCGCGATCTAATGAGCCCCTTCCCTGGACT AAAAACCTACTTCCCTCGAGGCTACAGGGGTCAGTCTGGTTCGCCAATCT GACTGATCTTTTGGTAGGATAAAAAGCCTTGGTTcgttaataaaataata aatctgTTATTGTCTTCTTCTGTTCCGTTTTGCTCTCCTCCATCGCTTGA TAGGTTATTCGGTCCCTATATTGTCAGCAATCGCCGTATGTTCATGAAAA GAAATGTAATCGATTAATAAAGTTTAAGTACACGACCATATGTGCAAATG AGATGTCAAGTCTACTCCGTTCCTCCCTTTTATAGCGCATGCTCAGGAAT TCGCATGCCGGTACTTTCGTCCAAAATCGTATAAGATATTCAGATTTCcg gatattttttcaaaatatagcgGAAATCGCACATGTCATGTTATGAGACT TTATTTATGaatcactttaaaaaaaacaattctgaataactttaacgtca tgagaattgtaaagaaagttaattgtttttaattataatgactgttgtaa aacaATTGTTGTGTTGAtgtatattttcttacattttgttaaaccacacg caacaaccttctactcagaatcacgttccaactcgatactttttttcgga caccctgtactacttttatgtccctttaagtttATTTTGTACATTcgctt aaagggacataacagtacttgcgaaatttgtaaacaaactgtatgcagcg gatacaaaatcgaaacaaatgtcacatgtcaaaatagaaaatcaaaccaa atatggcaaattttgattgttcaattgttttacaagtttgttttggacac gtgattttaattgttctctttaatgacacgcggttcgcgcaatgtttaca ttttactactttaatgtccctttaaagcgaatggactttTTATGTCgttg gatttctagaaaatttttgaggacttcaattcaattcatgatattcataa cGTTATGTTTTATACGGAGGCACCGAAAATAGCCCGGACGTTTGCCacta gtttagtttttttaacatTCAAATCTAGTGGCAAACATCCAGTCTTTTCC CGTATAAAATATTATGTCATGAATACCATGAATTCATTTGTATTTGTTTT ACTTCTTAGAACAACCAGTAACATCAGGTGATCTAAAACTTAGTTTACCA GTTTTATCTGCTGAGTGGAacgtcaaaatcaaatttttaatcACTGGCTT CCCAGTCCCACATTCCAAATATTGTGCCATCTTTAGAATGTCGAATGGTG ACGTTTACGGTACACGCACACCATCCATCTCTGTCAACACTGAAACTTCA AACCTAATCATTGCTTCTGCAGTTAATGGCAACGCTAACAGATACAAGTT AACATCATTTCAAACCAATACATGGTATGATGTCGAAGTCGACCAATCCT ACAAAGGGAATGGAATATACCAATATTCCATCATCGTTAATGGTGATCAG ATTGCATCGGAAGTGAACACACAAGCTATTCAATTTTACAACGTTGGTGT TTATGCAGGGCATCCATTTCCATCTCAATTATCCTGCACGGGGGTTATAA GTTATCTGAAAGTTACAAACTTTTTGTaaaattaatcttaaaatctaaAT AACTGTTAAAAAATTTGCATCATCCAAGCCTAGTAACGGAGGGAGGACAT GAGGACGGCTTCAAACTGTACCGTACCCCAATCTCGAAACGTAACCCTTA CTAACCCTAATCCTCAAATCTTGACAGAATAGAGAGTTTCTGTAGTCATA AAGGCAACTGCAACGGCAACGTGAAAACATTAAGATTAAATTCACACCTT TAAGCTGTCAAAAATCTGAGTAAACCCAAATTAGCCGTTTTCTCTTCTGG TGCCCGACGgcaaatcactcatttttgacGTTGTCAGACAACGTGATATT TCTACATAAAAATCAACGTCAAACAAAAAGTAAgacagttttgaaaaaag atatttcagAATCTTTTAAGCTAACAATTAGCTTTTTTTCTTGTACAAGA TGTGTAAGTTTCAc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016100TCONS_00016100Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016100-proteinTCONS_00016100-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000226supercontigsc0000226:283073..289436 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0.07 0 0 0.14 6.34 5 1.81 1.3 0.35 0.36 16.66 30.13 1.15 1.21 0.78 0.8 0.09 0.49 0 0 0 0