XLOC_009095 (gene) - C. hemisphaerica

Overview
NameXLOC_009095
Unique NameXLOC_009095
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000232:90703..99175-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009095 ID=XLOC_009095|Name=XLOC_009095|organism=Clytia hemisphaerica|type=gene|length=8473bp|location=Sequence derived from alignment at sc0000232:90703..99175- (Clytia hemisphaerica)
TTTATAACAACCAAAGTTCATAAACTTTATCACACTTTAGTAACCAACCA
ATAATATCTTTACTGCAAAACCACCGAATGCTGTTACCATGTAAAATTGG
TTGTTACTCACCATTCACAATAGTTGGACATCAACCAACAGGATCACTTC
TTTATTTAATTATTCGACTAGAAGAACAATGTTAACAATATCTTTGGAAC
TTTAAAGAATTGGAAGGTAAATGGACCCCTCATTTTTCTTCTGATGGTTA
TGGCTTTCCATTAAACTTGGTTTGGTATTCTGCAATTTCCTCTGACCACC
CTGATTTTAATGACAGTACAGTCAAGTATCAATATTTGAGGTATTATGAA
AATCGCTACTTTTTGCCGTAATCGCTTTCGTTTTTAACATAAGGTCTTAG
CAACGGGTACCCCAGGCATAGTTACGGGGCATTGAGAAAAAATCTTGACA
TAGAATTTCAAAAAGATTCACACTATCATATTCTGCATTACAAAATACAT
CTGTTCTATGTTGGGTTTTTTTCTCGGTGTTTTGTAGGCTTAATTATCGT
CATGCAAAGTAAATAAAACCCCCTGGAAATCTTTAGGTTTTGATAAGCGA
AATACTTACATACTATTGTTTACTTTTCAGGTATTCATCCAATCAGAATT
TGTTAGCGAGCGGTATTTATCCAATTGGAATCGCGTAACACGAAAGCGAA
AGTGAAAGTGAAGGCGGAAATATATTCTTTTTTCAACGTGATTTGCATAT
ATTAGAACAGAAAGAAACACCAATTTGTCAAAGATTTGTTTAAACCCACC
TTATTTTTTGTTGAGTATCGCCTAAATTTATCGATCAAAAGAATATACTT
TTAAACATTAATCTTAAAATCTCTTTTATTGTTAAGTATCCCCCAAGGGG
CTCAACGCCGAAAGGAAAATAAGCGGGCGGAACCACCCTCGTAGTTTAAT
CTCGGGATTGAAAAAACCTGGAGAAAACCTTTTCCGTACAAATAATGTAG
GCTAAGGAATTTTAAAACACGGCATTTAAAGTGAAACAAGAAAGCGGAGA
AGTGGCGATTGGAGGTTTTTGTAATTAGACAGCATGACAAAGGTTTATAT
TTTAGCATAACAAAGACAAACTCAGGAGGTAAGGTAAATTGCATTTTGAC
TGCTTTTAACTGTTTTTCTAATAAAGAATATCATATCTTAAAACTTGACT
TCACTGAAAGGTACTCCAAAAGCTTTGTTCAATTAAATCAAAAAATTGGT
GATGTTTATTTGTTTGAAGTAAACATAGAAAATTTTCCAAATCCCCCATT
TCGATTAATGCGATGAAAAATGAAACTTTTCTATGTTTCACTTTTTTGCA
CTTATTCTTCAAAATGAAAATATTAAAGATTTGAAAGAAAGTTCTTCTTT
TATACAATGATTTAATGATACTTTGTTGACAATCTAACTCTCGCATCAAA
TTCCCGCTTTCTTCAGTAAATTAAATTGAAGATGAGAAAAAACCTAGGTC
ACGGATCACAGATTGTTTAGTACCAGCCAAACCTGACCCCCTGTTGTCAG
TCAAAAGACATGCAATGAAACTGCCAGTAACAGAAAAATCCTTCTTCTAA
GCTAAGATAGCTACATACATATTGACCCGCTTATTTTGGTTTCAAGAATG
GCAAATGTCTGATCTGTGGACGTTATCCAGAAAGTGAATTTGGCCACAGG
GCACCTTAGGTAGCCCGTTGTGCAAATTCATGTTATTCCTCTTTTCTCAA
AAAAAGCAGATCCTCTGTTTTCCTTACCTTTTTTTAAAGTCAGAAAATCA
TGACACGTTTCTACACAGTTGACTGTCTTCTGGAACAACACTAAGCTTTT
GAAGCTTACTAGATGCGAAAGATGCTACTTTGAAACCACATTCATGACCC
ATTTTGAAATATGTAAATTCAGTTGGATTCATTGACTGAACTGGTGCTTT
CCAGAAATTCTACAGTGTAGGTCATTCCAAATACCAAGTTTATCATCATT
CCCAGAGTTTATTTGTCATTTTTGAACCTTACTGTTCTTTTAAAGTTGTT
CATGTGAAACTGAAGAATGTACTTTAAATAAAATCTGTTTTAAAAGTTTG
AAAGAAGAAGAAAAGACAATTTCTTTAAAAAACATTCTTTTAAAAAATAG
AACTGATTTCCATGTCTCTTGTTTATGTATTTTAAAAAAGAAATCTAAAA
ATTACAAAGTCTTCTCAATGAATATCATTTAGGAAATCTAGTTTGATTTT
TAAACAATTCTATTCATATGATTATCCTATGCATTGGTCAAGCTGGTTGT
CAAATTGGAGAACTAATCATTGAACAAGAAGCCAAATTCAATCCATCCAG
TGGTTATTACTCAGCACTTTTTGTGGATGTTGACAACAAAATAATTAACG
TGCTGAATGAATCAAAAGTGGTTTCAAAATTTGTCAAAAAGGTTAATTTG
ATAAAAGGAGATAGTGGATGTTTAGACAAGTTTACAAAGAAAGATAAAAC
TGAAAAGTTTATTCAAAATATTCTTGATCACTTGAGAGATGAGATCATTC
AACAAAATAATGATTGCTGTAAGTTCTTTTCATTTGGATTCTAGTTGAGA
AACATCAGACTTTTCCAGGAGTAAAATCAAACTTGTGGCTCTTATTAGAT
TGCTTTTAAAGATAAAAACTTTTCGATTTTGGAGTTAATAATTTCATCTT
TTTACTTTTAGTTTGATCTTATTTCAGATATAGCGTCCGTTCACAGTTTG
ATTGGATCCACTAGCTGTTCCCTGTTGAAAATTATATCAGAGGAAGTTTC
AGAACGATTTGAAAATGTCAAGATTGTATCGTTTACAACTTTGCCTTTCA
AAGAAGGAGAATCTTCATTTCAATACTACAATGCGATGCTTTCGCTGAAT
GTGTTAAGGTGAAAAAGGTTTTCTCTGTGTTACTGTAGTGATTGTTGACT
TTTTGGACCTACCCCGGTGGGGTGGAGGTCCTATAAATTAACCCGTGTTC
GTTAGTTAGTTAGTTAGTTACCAACTTTTCTCGAGATTGGCTCATTCAAN
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TCTCCTTTTTTAGGTACTTTAGCCTATGTTTCCTAATCAGTAATGACCAT
ATGCTCGAAGAGGTTTCAAAGATGAGGTCATCAAAGAAGTCAATCAGTTT
TTCTGAAATAAATCAAATCATTGCAAGTCAAATTCACATGATATTAAAAA
CACTTGACAGACCCAGTCAAAAAAGGAGGCATCTGAGTTCAGATAGAGAT
ACCATACCAGAAAAAGACCCAAAAATTTTAAATGCGATTGCAGATTTTTC
CTCCTTCAATTGCCTCTATTTTATGAGCATTGGAATGGTTGAGATAAACA
ATGATTTGGGTTATAAGAAATCGTTAACAAAACTTTCACGGAAATGTGTC
AGTTACTTGAAGCTTGGGAATCAAAAGGAAAAGCCAGCTTTACACAGAGC
TCTTTTGTTTTGTGAAGCAACTGATGAAAATCAACACATTCTTAGTGCTT
TCTCAGAGTCATTTTCAACAAGATTTCAGGTTCAAGCCAAAAGTGGAGAA
ACATTTAGAGTCTATGAGAATACTCGAGGTAATTATGTTACTGTGTTATT
TTATCTTTTGCTATTTATATGATCTTTCTATTGCAACACAAATAAACTTC
ATGATAATAAATACAGTAGGAAATGTTGCCTGTATGCTGTTTTTAACCAC
TTTATTAACTTTTTAGGTATTGCAGGTAGATCTCAATTTGGTTCTGGAGA
AAAAACATTATGTTCAGTATGCTTCCAAAGCCATCATTTAGTTCGATACA
TGACCATGATATCTGAAAAAGTTCAATTGATGCTTCTTCACAATGCTTTT
GTCCAATATTATTCACAAAGGGGCCGAAAAGGGAAGAAAGCAACGGCCAA
TGGAAAGGTTGGTTGCAACATTTTTCTTGTAAATCTTGAAATCACACCTT
GATATAGTACTTTCTANTAATGCTTTTCTCCAATATTATTCACAAAGGGG
CCGAAAAGGGAAGAAAGCATTGGCTAATGGAAAGGTTAGTTGCAATATTT
TTCTTGTAAATCTTGAAATCACACCTTGATATAGTACTTTCTAGCGGTTT
TTTATTACGTTTCTGTAGCACATTTCTATGTTGGAATTAGTGGTTTTATT
CTTTACATTTTTAGCACAATTTGGAAAAGGAATATGCAAGTTTTATGAAT
CATTTGTCAATGTTTACTTCTGACTGATGATCTGGTAGTTCTTAGAAAAA
GATGTCCAAATTAGTTTATGTTTTTATTGTAGATAAAAGTTTTGTGCATT
GTTTTTATTTGTTATTATTATATATTGATAAAAAATGCCAAAAATCTCTC
TTTTCTTCTTCAGTAGGTATCGATTCAGGTATTATATTTTGTCCTAAATT
TCTTGCTCAACAAGATTTCTTTCAATACAAATCCTTCAAATTATGTTTTA
CAGTTCTAACAGCAACAAATAATGATTATTGATGTTGAGGAGATACTGGA
TTTGTCTTTCATCAACCCAAACAACATTTTTGAACAACTGCAAGATACTG
GTGATTTTTACATTCATCAGAGAGCAGTCAATGCTTGGAATTTACTTTCA
AGGGAAAAGGATTATGACAATGCGTGTGCTCAAAGTCAAGTTTTGTTGGA
TAAAACATGGGAACATTTGAATACAGGGTATTGGAAAGACGTCAAGTTAG
TTTGGAGACATTTGTACACATTGGCATCTCTGATGAAAACCTGTAGTTTA
TACTGTCTCAGTGACACACAGAGTGCTTTAAAAGCTTGTGATATGGGCTT
GTTAATGGGTGCACCTATCTTTGATAACGTTCTTGGTAAATTAGCTTCAA
AATTGTCCGAAATTTTAAGAAAAAAGAAAGATGCCGATGATGTTGTGGAA
CCTGTTTCAAAGAAAATAAAGGGTTGCATAGAATATGGAAGAGCCAATTA
TTTACCAACCGATGATGTATCAAAAATTGAAAATCGAATCCAAGAGAAGT
TTTCCATCCCAAAAATTGATAACATATCTCTAATAGAATTTCAAGAGAAC
TATTTAAAGACTGAAACACCTGTTATCATTCAAAATGCTATGAATCACTG
GCCAGCTATGGAAGGTCCGCGAAAGTGGGGGATTGATTATTTGAGAACTG
TTGCCGGATCAAGGACTGTTCCTGTTGAGATAGGTGATAAATATACTTCA
GATAATTGGACACAAACTTTAATGAGTGTTAATGACTTTATTGATAAATA
CATAGCCAATAGGACAAACACAGGATATTTGGCACAACATCAGCTTTTTG
ATCAAGTACCAGAACTAAAAAATGACATTCTGCCACCAGACTATTGTTAT
TTAAGTGATTCTGAGGCTGAGAGACCTATTTTAATGCATGCATGGTTTGG
ACCTACAGGCACTGTCTCACCATTGCATCACGACCCTTANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNATGATAATAAATACAGTAGGAAATGTTGCCTGTATGCTGTTTT
TAACCACTTTATTAACTTTTTAGGTATTGCAGGTAGATCTCAATTTGGTT
CTGGAGAAAAAACATTATGTTCAGTATGCTTCCAAAGCCATCATTTAGTT
CGATACATGACCATGATATCTGAAAAAGTTCAATTGATGCTTCTTCATAA
TGCTTTTCTCCAATATTATTCACAAAGGGGCCGAAAAGGGAAGAAAGCAT
TGGCTAATGGAAAGGTTGGTTGCAACATTTTTCTTGTAAATCTTGAAATC
ACACCTTGATATAGTACTTTCTAGCGGTTTTTTATTACGTTTCTGTAGCA
CATTTCTATGTTGGAATTAGTGGTTTTATTCTTTACATTTTTAGCACAAT
TTGGAAAAGGAATATGCAAGTTTTATGAATCATTTGTCAATGTTTACTTC
TGACTGATGATCTGGTAGTTCTTAGAAAAAGATGTCCAAATTAGTTTATG
TTTTTATTGTAGATAAAAGTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016301TCONS_00016301Clytia hemisphaericatranscript
TCONS_00016300TCONS_00016300Clytia hemisphaericatranscript
TCONS_00016299TCONS_00016299Clytia hemisphaericatranscript
TCONS_00016298TCONS_00016298Clytia hemisphaericatranscript
TCONS_00016297TCONS_00016297Clytia hemisphaericatranscript
TCONS_00016296TCONS_00016296Clytia hemisphaericatranscript
TCONS_00016295TCONS_00016295Clytia hemisphaericatranscript
TCONS_00016294TCONS_00016294Clytia hemisphaericatranscript
TCONS_00016293TCONS_00016293Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016297-proteinTCONS_00016297-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000232supercontigsc0000232:90703..99175 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.34	3.83	4.78	5.21	10.71	7.96	7.8	8.05	4.42	4.95	4.98	4.17	3.4	4.45	2.61	2.97	2.84	2.82	3.22	4.28	4.51	4.64	2.33	2.84	5.41	5.74	3.5	2.58	3.01	2.64