XLOC_009199 (gene) - C. hemisphaerica

Overview
NameXLOC_009199
Unique NameXLOC_009199
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000240:175116..186038+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009199 ID=XLOC_009199|Name=XLOC_009199|organism=Clytia hemisphaerica|type=gene|length=10923bp|location=Sequence derived from alignment at sc0000240:175116..186038+ (Clytia hemisphaerica)
AACCATTCAAGCGTTGAAAACACTTTTGTTTGCCGCTTTTGATAAGGAAA CTGAAAGAAATTAAATCTGTTTCATCCTACCaccaaatttttgggaaaaa attgaaactgacaaattattttcattttagcatGCTCCTTTGAATTGGGA AtgtatgtttgatttttatggCGTCATTATTAAAGGGTATTCGATGATGT TTCATCCAGATAATTATGCACCGCATAACCATTTTACTGACATTCATATT ACTATTGAACAATGTTGATGCTTACAAACGCCATAAACGTTGGGTGGACG TCGACGATGACGATCAACAAACACGAAACACCAACCGCCAACAAACTCCT ACTTTGAACGCCCAACCGCCCTCAGATTTAAACGGACTGAGCAATTTTGT GCAAAACCTTGACCAAGGGATTGGTGAGAGATACCAATCGATAAACGATG TGTCGAATTTACGTTCGCTTGAGACGAATCAAGCACCAATCGAGGTGAAT CAGCCACCAGTAGAAAGTTCACCAGTTCTTGCGAACGGTCCACGTGGAGG TGGCGGTGGTGGTGGTGGGTTAACCATGGAGCAACCGGTAGAGTTATCCT CGCCGCAACAATTGATCAATGAATTTCATGGTCCTTTGAAATCTATCGTT GGtgaaaaagaactttctttACCGCCCATTGAAGGATGTCGTGAGGGCGT TGAGGGGTGCCAACTTGCTAACCCGCCCATAGAGACGCCCATAGCTGATA CAACAGGCGTCAGCACTCCTGACCAAGCCTTCCACACACATNCGTTGAAA ACACTTTTGTTTGCCGCTTTTGATAAGGAAACTGAAAGAAATTAAATCTG TTTCATCCTACCaccaaatttttgggaaaaaattgaaactgacaaattat tttcattttagcatGCTCCTTTGAATTGGGAAtgtatgtttgatttttat ggCGTCATTATTAAAGGGTATTCGATGATGTTTCATCCAGATAATTATGC ACCGCATAACCATTTTACTGACATTCATATTACTATTGAACAATGTTGAT GCTTACAAACGCCATAAACGTTGGGTGGACGTCGACGATGACGATCAACA AACACGAAACACCAACCGCCAACAAACTCCTACTTTGAACGCCCAACCGC CCTCAGATTTAAACGGACTGAGCAATTTTGTGCAAAACCTTGACCAAGGG ATTGGTGAGAGATACCAATCGATAAACGATGTGTCGAATTTACGTTCGCT TGAGACGAATCAAGCACCAATCGAGGTGAATCAGCCACCAGTAGAAAGTT CACCAGTTCTTGCGAACGGTCCACGTGGAGGTGGCGGTGGTGGTGGTGGG TTAACCATGGAGCAACCGGTAGAGTTATCCTCGCCGCAACAATTGATCAA TGAATTTCATGGTCCTTTGAAATCTATCGTTGGtgaaaaagaactttctt tACCGCCCATTGAAGGATGTCGTGAGGGCGTTGAGGGGTGCCAACTTGCT AACCCGCCCATAGAGACGCCCATAGCTGATACAACAGGCGTCAGCACTCC TGACCAAGCCTTCCACACACATGATAGTGGAGAAATAACCTTACAAGGCA ATATTTTCCAACCAGGGCCTTCCTTACAGCGCGTTGAACCGGAGATCCAT CAACAATCTCCAGAGCCTGTTTTACACAAAATTGTACCAGGAAAGACTGT GTTTTTAAGACCAGTGCAATTATTTCGGAAGCCGAACCATATTTTTCGAC ATTTTCATCATCGGCCACGGATCTTTGTTATTCATCGAAGAAGAAGGAAA TATAGTATGTTCCCCTTATCAGTTATTCGGTATTCATCAGATAATATCAT ATTAACATTGCATTATATCTTATTACAAACTGGCTTTTATGGGTGATCAT AGTTGGCAGTCTTTTATCATTAATGTTTGGCATTTATTGAAGTGAGCTGG ACGCtttcaacttgattttttttcggctTTACAACATCTTTTACGTAACT ACTTAATTGACGTAATATTCATTTCTCTTACCATTAGGGCCAGTTCATGT TTGTGAAACGACAGATTGTAAGAACGGTGGTTCTTGTACCGTTGTCAACG ATAAAGTCAGATGTTTGTGTCTTCGTGGATTCAAAGGATTACACTGTGAA GGTAGAATGCTGTGGATCTATTTTTTCATATCATTTATATCGTGATGCAC ACTAAGATTGACAATGGATATCCTTAGagacatttattttttttacttgc tTATTCTGTTTTTCCATGTTTCAGAGACGAGCAAATGTTATCCGAATCCG TGTTTGAACTCTGGTAAATGTTATGAAGACGACACAGGATTTTCATGCAC ATGTCCAATATCATACTATGGTGAACGATGTGAAGGTATCCTCGCTGCTC TCTTGTAACTATAGTTAAGCTCTTCAAACTGGTCCTTAAGGACATCAGCC GTTTGGTTTCCCTATTGCTATTAATTACCCTTTTCTAATAAAGTccgctt taagtgtgcactacTAATTCTTCTTTTGATTTCCATTTTTGAACCATAAT GCTTCAATTCtaacaaaatttgtgttttatGAAGTGTCCATTGTTAACTG GATAGATCTTTTCCTGAAAggatgatttcaaaatttttggtaatcaaaAT GACAAATGCAGAACAAAATAATGAAATCTTTTGATGCtagaaacttttaa tttttggtaAGCATTTTTCGGAAAATGGtaaacaaaacaagaaaatgaaa tgaattttcaaaCTTGTCACTACTGTTATCTCTTCTTGTAGCACGAAGTT TTTGTCATCCGAACCCATGTCGAAATGGTTATTGTTACGAGAAACATCCT CATGGTTTTGAATGTTCTTGTGATTCTGGTTTCAAAGGAATCAGTTGTGA AAGTAAGGATAAGttgtataccgagtttatcgttccacatctgcaatttg agctttactaagctcatttgacgccaatcgatacttcgattatcagccgg atCCAGAGAGAATGACATATGAGTGCAGGTAGAGAGTCTGTCACCATTAT TTCCCTAATACTAATACTATATTTTCCCTTGGTAGTGTGatggtttcgat cacagacttgcaccgcaatgcactgtgttcgaatcccaagctcTTCCAGG CAGAATTGTTAGGAAGATATGGttatagactctctaccttcactcataaG GATTAGTTATATCTAGAATGTCTTTATAAGGAAATGATTCCGTCGACATT TACTTATCGATTAATCTTTGAAGACTGTTAGAAACTTGCACTGCTTCTTT TTCAGCACCATCCTTCTGCCATCCGAACCCTTGTTTGAATGGAGGGATCT GTTCAGAAGATGATACTGGCTACAAATGCTCATGTGCTAAGGGTTTCTAT GGCACCAATTGTGACTGTAAGTTGCCCTTCATTTGCTTTCTGATAACGGT TACGAAGGTTTCTGTCTGAGAGGGGTAAGAGAGATGAACCATCCCATCAA GGGAACTGGcctaaaaataaactaaaatttttagaatattgTAGGAAATC ACTACGTTAAAAATGAAATAGTAGCtaagaatttcaatttcaatccaGTG CCATATCACACTAGTCAACAATATTAACATTAATATTTCTCAAAGCTTTA TAAATGTCTCGGTCATATGTAAATTCTGGGCTCCTTTTGGACGACGATTA TTAACCCAAGACGAGAAAAGCTTGCGTGGCAGTCTATCAATAGGCATTCA CGCAACATGCCCAAGCCAAGCAATCTGGCGAGAGGTGACATATGAGGCTT TTGGTTCCAACCCTGTGGATAAATACTTGTGTACGGTTTACTCGACACAT GGCTCTGATGCAAATGTGGTGAAAGGATTCTGTCTTTAATGTACTAAGTG TTTGACCTGATTTTCCTTGGAAGGATGTACAGGTTTCTTATGGCTTTATC TACTTGTTTTGCAGTCAAACGCCAAGTATGTCAAGTGAACAGTTGTCAGA ATGGGGGAAGTTGTGTACAAGATTTGGATACCATTCACTGTTTATGTTCT GATGGGTTCAGAGGTCGCCTCTGTGAAGGTATGATATCTTTTTTGGTAGa tttctgctcatcctctaacGAAAAAGTTTCATGTAGGAAATATAAAAAGG TCTGGAAGTCAATTTACCTTTTTCGTCCTTTATATTTTCCTGAGTAAAGT GTTGACCTCTAAATGCCTATTTCATGTATTGcttcataattttcaatttt catttgaaacatCTTCTATAAACACAAAACTTGTGCTGGCTGATTAAGGT TTTCTTTTCACGGTACAACAAGTGAGTCCAAGCGTTATTACTTGTTTGTG GTAAAAAAGGAAAAGATTTCCATGACCTAAATCTATTAAAGCTTTAAAAC ACTATTTCATTTGTATTTTCAGAGAAGATCTTTCGACCTTGTGGTCcgaa tgtttgtttgtttggtgGAACATGCTTAGCGACTGGACAGTTTGATTACA AGTGTATGTGCCCTCCAAGCAGGACTGGTCGTCGTTGTGCTAGTAAGTAA TAATCGATTCCCGGAAAATCCTCCTTTGGTGATTTGACCAGGGGAAATTC ACTGAGCGGGGATTCACCTGGAAATACAGGGGTATTTACCAGGGATGATT TCCGAACACCGTAATTATTTATCAAATAGGACTTTGAGAGAGTAACTGTA CCTCCTGTTTGGTGTTTATCCCTTTACACCTATTGAGCAAGTCTTGTAAC GTACGCTGATGACTATTTCAATGAAAACATTCACCAAAAAATCCGCCCTT TGCAACAAAAGCTCTTTGAGATTTGAGATTCTGTTTTCTTTTGTGCTTTA GATACAACAACGCTAAAATGACATAAaattaaatcattttttgatatgtt tctttGCAGGCATAGTAGAGGAGCCTTGTACGAACTGTCACACGCATGCG CTGTGTGTGGAGCAAACATGCAAATGTCGTCCTGGGTATGTTGGTAGTGG TATCTTTTGTGAAAGAGGTGAGAAatgtgatgtaatgttagatAATTTGT CGAAAATCAACATGAAGAGCTAAGAGGCTGCATGGttaatttgtaaaata aaaaaatatcagacgtttttaatttaaattcggattctaattttcaaaat ttaaggaGTGACACTCAGTCACAACCTTTGGAGCTCAGTAATTTTTCAGA AGACTTAAATTCAGTTTTGTTTTTCACACTAAAGAACAAACAAACGAAGg aagattttccttttttatagcACCAAGTAAATGTCATCCGAACCCATGTG AGAATGGAGCACAATGTACTGACAAATATTATTACATGGATGTGATCAGT GAAAACGTCCAACCTCTCACCTCCTCATCTTCATCGTCATCATCTTCGTC AGCTGAAGAGACGAACGGGGAAGTCAGTGAAGCCATCGAGAACGTTACTC ctcaacaaaaagaagaaactgCCATCATCAGTCAAGAAAACGGTGATGAA CGCTCCTTACCTGATAACATTCACGCTAACGATATGAGTAAAGAGAATTT TGAGAGCGCTCTCTCAGGACACGATGTGTTGAACCATTTTTCACTTACTA ATGGATTCCTTTCGAAGAAAGATTCTATCGGTTTTGCGATAAACTCAAAT TCTACACGAAAGAGACGTGATGTGGGGATTGAAAGCCTTCCTGATGGAGT AGATAAGAACATTCTGGATATCTATGGCTTTTATTGTTCATGTCCCAAAG GGTTTAAAGGATTGAAGTGTGGACGTAAGTGGATCTCTATGCTTTAGTGt ttatgaaatttcttttttagtaTCTAcctttacaagcttttttaccTGGA ATAGTTTGAATGTTACCACGATATTTATTTGTATGGTTATCATAAATTTC AATATTCACTTAAATACTTTCAGTTTAAGTTGCCAAGAATTGTTTCATTC AGTCCGCTTCTCTACCTTGTACTAGAAATGGAGCCATGTGATCCAAACCC TTGTTTACACGAGGGTGTTTGCGAAGAGAAAGATGGACTTCCCTCATGTA TTTGCAAATTCCCCTATGTTGGTGCACGCTGCAACAGTAAGTCCATGAAG CAACCCTCTTGTTAATACTAAAGTTAATACTTACTTTTTTGCGTTGTAGT GAACATTGTCCTTTGCTCGGTTTGAAAATGTTTGCAAGAAAtgcttttga aaagtttgacgAAGGAGCTGTCCAATTTAtccttttaaaaatgaaaagta aaaaaatcggAGTTGATTTTAGTGTTGGATATTAATTAAACTTGAATTAA AGCATTCCGAAATGCTTTTCCACATGACACTTTTTATAACATCTCACTTC TTTCATTTGCAGCAACCAACGCATGTGATCCGAACCCATGTCGCAATGGA GGTCGTTGTACGGACGTCAAAGGACAAGCTACTTGCGCATGTCAACCGAG ATTCGAAGGAGAAAAGTGTGAAAGTAAGAAACTTCTTAATCTTTCATTCA TTTCGCTACGTTCCAAATTGAAAACACGATATTGTATTTAGCTGTAGAAA CCAGGAAACAAGGCCATCTTAAATCTTGAATTGAGCTAAATGTCTAAGGA AAAAAATTAGGTCATTTTATAAATGTAGCTGAAACGATATCATCATATCT TTTCCAGTCAACAAATGTGACAAATGTCATCCGAATGCAGATTGTGTTGG AAACGGTCATTGTGTTTGTCGTCAAGGTTACACTGGTGATGGTGTCATCT CGTGTGAGAAAGAAGGTAACAAAGTCAGTTTAATTAAAAAGTTACCTTTT ACATTCTCTTTGAAAAGCCACGGGTAGTTTTATGGTAGTCAACTCTCGAT GGTCTTTCTTATCTCCATCTTTTCATATCTGCTTACCAGGAAACAACAAT CAGGATCCATGTCTACTGAAACCTTGCAAGAATGGAGCGACTTGTGTTGC TCATGACAATCAGTTCAAATGTTATTGCAGACGAGGGTTCTCTGGTCGTT TGTGTGAACAAGGTGGAGGTGGACACAATGAAGGCGCAACCACCCCTCTT CCACCCATCACTCAACCACCGGAAAAGAAATGTATGTCATTTTCACTGAG TTTAGAGCCCGAAGGGGATGCAAGAAAAGTCGAGCCTTTAAGATTTGCGT CACATTTAAAAcaacggattgaatctagccctTATTTGTTCGTAAGaggc atatttttcgaaatctggcgtTGGGTTTGACtttcaatctttcaaatttt cattttcaatcaacttttgatgggaaataagtggccaATGGGGCTTTGAA TAAAATGGTCATTTTACTCGGTTGATAAAAGCTCGACCCACCCTTATCGA TATCGTACTAGATCTTTTGTTTGCGCAGATGACACTAGCTAAGGTGAATT CattatttttagttatttttcctaatctttctTTGCAGCCAATCTATGTC ATCCAAACCCCTGTTTGAATAGTGGTCAGTGTATGGATGTGGGTGACTCT TATGATTGTATTTGCATGTCGCAGTATAAAGGGAAACATTGCGAAGGTCA GTTAGCTGCTCTTACTTGTTAAGGACTTTAAGCCTTAGATTATTCTCTTT ATTATTTCTAAGGGAAAATGAGGGTTATTCATTCCTTTGATCCTTAATTT GCTTGAAATTTAGTTATTCCGGGctcattttaaataaaagttgtTCAGTT TTTTTCGGCGTTTTGGAGCCTCTCTGTTTCTATATAAATCTTTCTGGACT GCTGTTGGTTTTGTCGAGGTATGAACTCGACAACTGAATTATGAACTACA TTTTAGAATATCGAAATtaccattttcttttctttatataATTCTCTCTA CCGTTCCATAATTATCCATCTCAACCAAAGTTCTTTTTAACATTACAATT AAGCaagataacttttattttattttacagaGGACAAATGCATGGAATGT GACATCGAGGCTACTTGCACAAGTGGTCGATGTTATTGTAAAGAAGGCTT CCACGGTGATGGATTCAGTTGTATAAGAGACCAGCTGTGCGATGAACCTT GCCCCAAACATTCTCGTTGCGAGGGCAATAATTGTGTTTGTTTCCAAGGC TACGATTTCCATAATGGCCAATGTTTACGTAAGAATTTCGTCGTTTCTAG ATTTTACTTATACCTGCAAAAGACACGAATTTTTGCTAGAGTACTGCAGT TCTCTTTATTTCGAAGTTGTCTCCAATATTGACCTTTATCATATATTACG ACCAGTTATCTAAGAAAATGAAGACACTCGTTGAATTTTGTTCACGGGCT CCACGGCTAGCTCGGCTACCTTTAATCTGAACAGAGCTTAGCAAGGAACT GGGAACTCCTGTTTTGTGGCGCTATATCTTAAGGTATACTTGTCGATCGC TTTACTTTCCAGAAACCATGAAAAGAAAGTGATTGTTGTTTTACACGTCT CATGtttctttcctttttatttGCCTCAACTTAAAAGTGAGCTCTTTTTC GTTTACAGATTTTACAGATCCAGTGTTGTACCAACAGAGTGCTCCACCCG CAGAAACACCCATCCTCCAACAACATCACCATCTTCAACACTCACCTTCT ATTGCCGATGTTCCCCTCCTCCATCATGATGGTACACCCGTCACCCATGG TGCCACCCTCCATCCACACCTCCCACATATCAAACATGTTATCTCCATTC AAAAGCACCCTCTTAATGCTACCCAAGATTTTCCACATTTTAGTGAGGCA GCTAAACCAGCACCCTTCATACCTCCTCCTCCACCACCTCCGCCTCCTCC TCCACCGCCAGTTTTAGTGCACGGTGCTTTCATACTACACCCTGAGCAAG TGCAGCCACAACAGGCTGCAGTTATTGTACAGCCTGTAGTTGCACAGCCT GTAGTTGCACAGCCTGTAGTTGCACAGCCTGCAGTTGCACAGCCTGTCGT TGCACAGCCAGTTCACGATGCCACACAGCCAATGTTTTACCCGCAACCCG TCATCACATTTGACCCTTCACAACAACATCAACAGGCTTACGTCGAACCC AACACCGCTTCTTCTTTATCCCAATCTCACTCCTACCCGCAAACATACGC ACCCAATACTAACGTCATTTCTTCCTTTGCTAACAACGCCCAAACTCAAA GCACTTACTCCTCCTCAATACCACCCTCCGcccaacagcaacaacaataC GCCTATCCTCAATCCAACCCTTCTGCTTCTCAAGACACCGCATCGCAGAA CAAAATGAAGGGTACGTACAATCCTTCATACGTAGCTAGTTTTGACGAAA ATGGCGAAGAAAACCCATCTTTTACTCCTGGTGCTAGATTGTAAATATTG TATAAAAAGGACTTGTAGATAGAAACCTATTAAACCAACCCTTTCCTCCA AACCTACTCCCCTCTTCCGCGGCATCTCAAGAAATTCATGGCGTTTTCTT TGCTGAATGGCGAGAAAGAATCCAAATTCCAATTAGAGGTACAAAACTTA TCTCCCCCCTGACTTTGGAAAGATAAGAGTTTTAAATTGGATACTTCTTA AATTTTCTCTTCACTAACATCTTCCCCTTATTCCATCAATACACGGGTAG ATAAGCTCTGCTTTTGGTTACTTTATATTCTTTCCAAGTATTAGATCCAA ACCTGTGTATTAGTCCTCTTTCATTGTCAACACAGCATTTTCGTCAAACC TGAAACAACTTTGTTCATTTTAGCTAACTTAATTCTTATAACGTAACTTA CTATACTTTCTTTATGTTTGCAGAATTACAAGAGCTTGGAGTTCCAAACG ACGTCGCCCAACAACTTGTTCAATCAGTCAACAATCCATCACAAAATAAA GCTAATGGATTGAAAGAAGATATCATTATTTCTGTGTTCCAGGTAACTAA CTACCCActcataaaaaacattttcagaaaaagtctAGTTGGAAAATCTt cttttaaacttaaaatttaatttGCTAAAAATGGAAGCATTATTTTTGGC GACGGTCCTGAACACTTATACGAGCTTTTCTGTAAAAGAACCTTTGGATG ATTACGAGATATGGTGAATATTAAACGAGATTTCATAGGACAGTCACTGG ATTTGCAAATTCATGGTCATCTAACTTTTCTCTTCCATTAGAACCTTGGT TGTTGGCGAGATGCTACGTCAAATGCATGGTGGCCTTCACAGCAACAAGC TTATGGAAAACGTGGCAATATTCCCAGTGTGGAAGGAATGTACTCAAGGA TCACCGATGATTACCGGTCAAGGAAAGATGCCGTCGGTACGTTGTTGAAC CTAACTTAGCTGCTTAGTCTACTTTCTTTATACGGCAATGCATGAAAGAT TACTTTACATACGTTATAGCCTATAGATGGGAGAAGCAAATAATTGGTTG GAAGGAAAAGAATCTGAAAATGAAAGCCGGGGGTTGTGGTAGCGATGTTC TGGGTGGGAGTTTCGGAAATGAGGCTACTATTGAAGATTAGCGGAAGAAG AAACTTTTGCATatacattttcgaaaaaactattttcttcTCTTTGACCA GGTCAATGTGCGGACGTCGCGAAAGAGCTTGGTTACAAAGTGTTCGCCAT AAAGAATGGTGGTCAGTGTTTGACGTCAGCGGATGCTCACCTTCTGTACA CGCGGTATGGACGATCGACTGATTGTGCTAACGGTGTGGGATCAACCGAC TCCTCGGATGTCTATTCCCTTGTAAATCATTGATTTCTTCATCATTCAAC TCTTTGGTTTGTTTCAGTCATTCGTATGCCTCTTATTCTTTCTAATTTAT ACACCTATACCACTGAAACTAGTAATTttcatatatatatttttttcaat ttcataaattgtacataactttttctttatatCATGTTTTATTATACAAA ACATCTTATGCCCTATAAAAACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016470TCONS_00016470Clytia hemisphaericatranscript
TCONS_00016471TCONS_00016471Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016471-proteinTCONS_00016471-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000240supercontigsc0000240:175116..186038 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.56 0.58 0.39 0.2 1.67 1.37 16.23 19.56 5 6.64 8.45 4.72 15.07 13.95 8.57 29.35 17.38 18.04 0.79 0.84 10.07 10.63 6.31 7.61 14.03 15.73 1.58 0.77 0.44 0.51