XLOC_009236 (gene) - C. hemisphaerica

Overview
NameXLOC_009236
Unique NameXLOC_009236
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000241:133621..140063+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009236 ID=XLOC_009236|Name=XLOC_009236|organism=Clytia hemisphaerica|type=gene|length=6443bp|location=Sequence derived from alignment at sc0000241:133621..140063+ (Clytia hemisphaerica)
GTCAAATTCTTGGAAGCTTGCCCTATCAAGAAAAGAAAGGTAAAAAGAAT TCGTCGCTTGGAAAAGTTAGCATTTAGAAGTAggcaggcacgacggaagc tttttatatctggtacggcgaagNACATGGTGATGTCACTGtttattttg tccatttttgacGAGGTCAATTCACACGGCCTTTTTGATGACGCCAACAG GATGGCTATAAAAAGacttatttgtttatatttactTTGCGTTTGCGTAA TGTTTAAAACTACCCATTGTATTCGTATTTTTTCGCTCTCGCAGAAAACG TCAAATTCTTGGAAGCTTGCCCTATCAAGAAAAGAAAGGTAAAAAGAATT CGTCGCTTGGAAAAGTTAGCATTTGGAAGTAGGGGAGAGACTACATACAG CAGAGGGAGAAGGTTCGCTCTCAGAAAATGACTTAACAGTGTTGTGAAAG TTAAAGTTACCACGCGTTTTTGGTTGCCGCCCGGGCCGTATATTTACCAG CCCGCCCAACTTATTCCATTTCAAACGCCCTCCGCCCATTGTGTGTTTGT GCAACTTTTCGCCATCGTTCTCTCAAAGGAAATCCCAAGGGTTTCCAGTG AAGTCCAAAGTCTACATTTTACGCAATCATCTTTGATGACTTAATTAGCT TCTTAACGATTTCCagtgatttgattggttgttCACAAATTATGCTAGTT GAAAACACGCGTTCCATTGGTTGGTGCTTTGTTACCNTCTACATTTTACG CAATCATCTTTGATGACTTAATTAGCTTCTTAACGATTTCCagtgatttg attggttgttCACAAATTATGCTAGTTGAAAACACGCGTTCCATTGGTTG GTGCTAAATATGCAAAATTCTTTcagaaagaaaaactttgcaaattTCAG AAACTGTGCTAGACGAACAAAACGAGTTTGTAACATGGACGAGGGATGCG AGAAGAAAATGGCGAACGAAGCAGTTACTTCTAAACCTCCAATTAGAGCT TGTGTTAGAGAATTTAGTGTTTATGTAAAGCTAAGAGATGATATTTGTTA CCTGTTGAGATGTAAGGAAGATGCTAAAGGACAAGACATCATGGATGAGG TAAAATTCTGACGATTTTATCTAGGGTCCAAAGTCCAATTTTGAATCGAA GTCCTTTTCTACTTGACCCTACCTTGGCttcttctatttttcttttcaag tttCCAATCTGATAGAATATTCCTTCAATTGGTTTAGAGGTTTCTCCATT AGGAAAAGCTTGAAGAAAAACCTCCAGGCTTAGCAgcttaaagttttaaa ataattaGTGCAATAATATAATTAACATCCCAttaaaaatgtttggaaaa atccttaaaattgaGGGTGAAGTCAACTTTTCTTGACATGATAAGGGATA CAATTCATgttaaatttttgtcatttgCTTGCAAACCTACAGTCAGGAGA TTTGGCCTAATTTCGGCCTTTTATATGCACGCAGCCATTTGTCATACAAA TCATTGATTGCCAAAACAGATTTGGATAGTTTTtcatataccgtcaactg ctctaactttggactatctgacaaaacatgggacggcaattcggccacca tttcaccgaacctccaaggtcatttgatttgagttaaggagcgGCGTATT AAAAactacacaatttctctttcgattttacagtactGTAAGtgaataca gaccagatatgcaacagtcccacaTAATTTTCGAAATGGTTGATTTTTTT CGATCTATGATTTGTATGAAAAATGGCTGCTTGCATAAAAGGCatcaaag gcgaaaaggtctattaggcAGAAAGAGGACCAGTCTTCAGAGCATGTCAT GGTTGCCCCCAAGGAAAATTTCCAACATAAAACTCTGCCCCTAAGATCCG TTTCCCACCACAAAAAAAGCTAgaaaaaacaggtaaatataGCCAGTTTT CAATGATCTTGCCCCGGAACTGtagatattataaaaattttgCCCCTGCC CTTGTAAAGTGAGCAATCTTGGCCCTTAAGATCTCAATGATTTCTGTCAC ACTCTGAAAACTGGAAAGAGGATAAAACAATTAAATTGATAAAATGTGTT GAATagttaaacaatagaaaaatatactgtaagttggtctaatattgata tcccttgtctaattccaACACCATTTCTAGAGACAGGAaaaatatgaaag cttgaatcactgattgaaaaaggattattcctctctgaccaccaagcaaa gaaaaacagtttcaacccttctatcaatttcagctgataaaaagggtgtc agaataAGAGGttggatgttgacattagactaAGTTACGGTAGGACATAA CAGGGGCCGCGGCTCCACATTGAAAGTGGTAGAGCCATGGTTTAGTGTCT AAGGaagcgccaccatggttggcgctgaggggagaaattttggaaaatta gcCCCTTCTAGACTGCCTAAAAAAggtctttttcaaggtttttacgcaga atttagctgaatcagtaaatttttttttgctttgaaaaaatgtggtcggT GGCCCCCCGCTGCCGCGGCCCCTGCATAAGAACGTAATTagtcaaaatcc caatgggaaagaaaggctaaaataaaataaagagaCCTGAATAGGAGGCA AGACGATAGACTCAAGGGACCAAACTAgacaaaaccttagaaaaaaGGTA TAAATCTCTTGAGGCTTTGAGGCCATGGTTCTATATATATGATCTACTtt gtgatttatttatttaatgaatgtttattgattttactttcattttttca tagaTGTGTGACAAACTTGGGATTATTGAAAAAGATTACTTTGGCCTTCA GTATTTCACCCGAAATAATGAAGCACACTGGCTCAATATGAGAAACAAAG TTATCCGGCAAGTAAACAAGCCCCATCTACTCTTTAGGGTCAAATTTTAC GTCCAACCACATCAGCTTCTTCAAGAATCGTCAAggtaaataaatcataa atcacatAAATGCGTTTTAACTCGCATTTTAGACATGTTGGTGCCAACAG TCAGTTAGCAATGCTATATTGGAATGGCAAGTTTTGCTTTAGGGGGGAAT ATTTTCTTGAATAGGaaggttgaaaaaagtttttcatgaAACCGCTAGAA TTTCCAAATCAGGAAGGTTTTTTTGATTAGGAGATTAGGTATTGAGCACT CCAGAAACAGCTGCAAAAGATGAAGAAATGTTCCCAATTTGAAAAGAAGG GAAACAAATTACATTCACTGGATAGTGAGGTCTAGGAAATTTACTGGGTA CCCAGATTCTTAATTCCTGATTTGGCATATACTTCCCAAAGAAAGCACGA AAAATTGGTGGAAATTCCAGATGTTTATTTCCTATTTAGGTAACACAACT TTCCTGttggaaaaataattctcatGATGGAAGTTCTTGTCCTTTCAATA TAGTGTTTCAGAAATAAAACACCTGCACCTGCCTGTACTCTCTTTAcaaa tttgacattttctctttttaggaGGCAATTCTTTTTGAATGTGAAATATG AGATCATGAATGGAAAGTACAACTCCAGTGTTTCAAAAATGCCTCGTTTA TATGCACTGATTGCTCAAGTTGAAGCAGGAAAATTTCGAGAGAACCATAT CAGCTATAACCCATCAAGAGCATCAAGCTGGGATGCAGATTTTAGAACAA AAGTGATTTTAGAACATTGTAAACTCCAAGATATGACACCAGAAGTTGCA GAATTTTTCTGTCTCAGAGAAATTGCTGAACTTGAGGAATATGGAATGGA AACATGTACAGTACGTAGTGAAGATAATAATCATGTTGTGGAATTTGGTA TCGGAATAGATTGTATCAGGATAGATCACGGAGAAGATGAAATACAGAGG TAGGAATAATtctaaagttgtaaaatttatgtttagGCCAGTTTTAGGTA AAATGATGAATAATTTTCAATGTCTTTGAACAGTTGAAGAAACTTGTCTG TGTACATATTTATGTTTATTGTTTTGAAGCTcctttctaattttgatttt tcctctTCTTCAGCATACCATATACTTGCTTGAAAATGGCTACACACTCA GGAAAGACTGTTAAATTGAACATTGTTGTATCAGACTGTGGAAATACTGA AACAATCTTGTATCGTTTAAATTCGAAAGAAGCAGCCGTTTCATTGTATA GATCAATAACAGAACATCATTCATTTTATCGTTGTGATAGTGTAAGACCA GCAGTGAAAGAACAAGTTGCCAGAGATTTTTTTGATACAATCTTATCATG GTTTCATGAAGATGAccagaattatatttttgatacgGAAAGAACATGTA GGGAAGCTTACGATCATGCTAGGAGGACACTTTATAATTTTGGATCAACA GCTGTTGCTGATGTTGTGGCACAGCGCAAAACTCTTTCTAAGGGAACTAC AAATGATGAGCCTGAAACATTAGAAGAGCAAGTAGATAATCTGAAAGAAG AACTAAGATGTTTTAAGGATGCATTTCATTGCCCAGTTTGTAGAGATTCT GTGGTTGATGTGGTATTACAATGTGGACATTTAGTTTGTTCAACTTGTGG AGATATCTGTGAGGAGTGTCCACTCTGTCGAGTAAATATCACGACGCAAA CAAAACTTTATTTACCAATTAACCTGTCACAGGACTCGATAGATGTACCT ATGGAACAGGCCCCTGTGGAAGAACATCTGGAAGTAGCATGTGCAATGGA GTAAAATTACGTACATGGATGGATCTATGCAAATGGTGGTATGGCAGGAT ATGGATTTCAATGTTATGGAGTCGGGAAATATATTTGTTCACTGTGTGAA TACCCTCTTGTGTTTGGAAAGCCTCaatcaaaaaggaaaattgcAATTTG TTTTATGGAAAGTTTTCTAATTGTGCAGGGTTTATTATGTTAAATGATAC TtgatataaaaaatcaaaaaaagtgtaTGGAAACTTATCTTTAgtgaaaa attctttattttatttagtatgaAACAAATAACAAAGCACTTGAAGTTTG ATtgcatttcaaatttcaactaGTTGTTTATTTGCACTGCAGTGGAAATA TTTAACCAAGCACATGTTTCACAAGAAAAGGACTTGTATTTTATAGTTTC CTTTACATTTTCAGAAGTAGCAGTATTGAAAAATCAGGAGTctgattgaa gatttttttaatttttaaaaaacatgcGTTCACAAAGCATGGTATACACC CTTTACAAGTTGTTTATTAGTACTTTATACATATTAAAATAGATGTTTGT AATATAGTCAAAAACGTATATAGATGTAAATTCGTATCAAGTTTTGAACG CTAAATCTCTTGCGGATTGCTGCAGACTGCTGTTAGCTCGCTTCTGTGAG GTTTGCTGCAGCCATGGTCTGTGCTATCTACTCCTGgatttcttttgaat aaaacaATTTGTCAACTGGTGTTTAAAGCTTGATGTGATTGAAAAAACTA TTTAGAGAGATGTtgtaagattttttgtttttatttttaatattgaaatt tgaaaaaaaggtatTTGAGTTTATAATTTGTTCTAATAGTATACTTTAAA TTTATATACAAAGATTAACATAAAAAGACAGAAATTGTTCTCGAATTTCA AGGCAAGATGTTGTTTTATCATCTCGTGTTTTTTGCTCAGCTTCAAAATT AGATATAGTTTTTTCATACTGGTCATGGAAAGTTCGTGTCAGTTCTAAAT GTAATTTAATAACTTTTCCGAGTGCTTTTTATGGAAAGAGAACAATTttg agcttgattttttgtttatttatgatAGATAACATAGTCTTTTAACAATA TTATAGGAgcttaaaaaagagaaaaggggATATTTTTATTATGATCATTT CCGAtgttttcagatattttttttataaggtgTAATTTTTAGGAGATCTA TTGTTAGGCAAATTTTCTGGCGTCAGATTTCTCTCCCTAAATTTGGTTTC ATTGTCTTAATCTCAATttattcctttgtttacttgattctattttgcta aattttgaaatatggtcCCTAGTCCCTCTAGCTCATTGCNCTCAATttat tcctttgtttacttgattctattttgctaaattttgaaatatgttcCCTA GTCCCTCTAGCTCATTGCAAATAAAGAACaagaaacatttgaaaaccTGA TAGCTGAAATGTTTGAACATCACACACTCTCTCTTTGCTGGTCCacgatt taaaagttagatatTGTCCCTGTAACTATAGATATTTTTTAGGATTACGT CACTAGTATCTGTAGCACGTATCATTGCTCTGATCTGAACAAAGAGATAT TTTATTCCATATtattgtgtgcaaaatttttttattttgtttaaatctta atttaaagaaaaataaaaactcacttttatatttatttaaaat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016526TCONS_00016526Clytia hemisphaericatranscript
TCONS_00016527TCONS_00016527Clytia hemisphaericatranscript
TCONS_00016528TCONS_00016528Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016526-proteinTCONS_00016526-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000241supercontigsc0000241:133621..140063 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MYLIPE3 ubiquitin-protein ligase MYLIP Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.65 8.53 6.61 7.28 38.94 32.73 48.93 54.83 47.02 76.3 83.69 56.32 63.36 53.79 55.06 54.68 28.97 39.2 44.76 69.77 52.83 55.43 36.59 41.5 54.81 57.96 290.52 256.61 88.27 78.69