XLOC_009349 (gene) - C. hemisphaerica

Overview
NameXLOC_009349
Unique NameXLOC_009349
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000248:175162..177189+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009349 ID=XLOC_009349|Name=XLOC_009349|organism=Clytia hemisphaerica|type=gene|length=2028bp|location=Sequence derived from alignment at sc0000248:175162..177189+ (Clytia hemisphaerica)
AGATTGACTTTTTTCgttattctttttcttttagtattaagaaaaaatca
aaaaaattgttatGTGATATTTATTGTCACCataacaaaaattgaaatta
gatGATGGCTGACAATGTGGAAGGAGGAGCTCAAGGAAACGATAAAGATG
CTGAAAACATTCCAGTAAAATGTGTAATGTTTGGTGGCGAAGGAGCTGCT
GGTAAAACTTCGatgtttatttattattttcataataaAATAAAGCCTGA
GTATGTACCTCCGAAAGTTGAAACAGATAATGGAATAAAAATGTACACAT
ATAAAGAAACTGGAGAAAAAGTACGAATTTATTACGATGACCATGAAGGT
GGCGGCGAGGACTGGGATTCATTGCGTCATCTTGGTTATGAAAGAGCTCA
TGTTGTAgtcctttgtttttcaatttacaCTACAGATAATCTAGAAAGAA
TAGAAGATTATTGGTACCCTTTTGTTAAGAAATATGCCCCCAAAGCTAAG
ATATTGCTGTGTGCAACTCAAATCGATTTAAGAACGAATCAAGAAGAAAT
AGATGCTTTAGCAAGACACAATGAAAGACTGGTTACCACTATAGAGGGAA
AACAAATGGCAGAGAAAATTAAAGCTGTTGGATATTTTGAATGCTCAACA
CATGAAGGGAAAGGAGTGAACGAGGTTTTTGAAGCAGCCGCAGAAGCAAC
GATGCATGGGAAATCCAAGGACGATAAATATTTTGAACGTAAAGACAATA
AAATGTGTTCGATGATGTAAATTCTGTGAAAGTTTATTGACCTGAACTTT
TTGGtgctttttgttttaaaggtGTGTTATTTTATGAATATACAGGCATG
GTTGTCTTAGTTATTGTTTGTTTGAGTGTTTCAATTTTAGTACAATGTAC
TATCTGGAACATCTTGTTATAGTACCACGAGTTTAGAAATTACACCACCA
ATTGGCGATAAGTGCACTGGTCATCCAATATAAGTACGCATTCTCGAACA
TTTGGGGTCATATAAAATGATATTGGACGGGGTGGTTTTTCCAAACTAGT
ATctgaaaaattaacattttcaacaatttcaatgcttttcaaaattttat
tgatttttcttcttgcaGAAAACTGGAGTCTGTCCGGAATATAGACTCTC
GTCCAcccgaaaaaaaaatattaagtaaaAGTGTCCTTTTACCAGTGTTA
AGGGTCAAATTATTTATTAAAGAGATCTAACTGTTTTTCCCAATAAACTG
AGCCTTGTCttataaaatctttctttataTAGGCTTGTATGTAAGTGCTT
TATCTTAAatgattttcataaattatttacCTTTTTGTAGATCTTTCTTG
TACCTTTAACTTATTTTTGATGCAAAACATAttcatcatttaaaaaaaat
atttttgcaccATATTTCTTAAAATGATTGCTGATTtatctgttcacgat
aagtgtgcaatctttttacttttacctataacttttgaagaaattcttca
atctttataaatttggtatcgttggagagatatttgtgagtggaacaatt
tgaaataaaaaaatctttaaaaaaattctaaaaatgaagatgaaaattaa
gaataaaaaagtgaagatcttgtagaaaagtgctataactttcattttca
ctggagagattctttgagcttaggaggtcatcactgtgaagaaatttcac
taaaatatatttattcaatataaagttataatACAAAGTTTaaaagtgat
tgaccccaaaaaacagcaggaAACAgtgtttttagacgtcaatcagctta
taactttgtttgatatcttttgactgaatgattatttttgagaaattctt
aaTTGTATTATATTGAGTCTTTTGAGATTTCGTCAGATTTTATCATAATT
TCATTCATATGAAGATTaatcaaaacttgaaaattgtATTGTTATACTCG
GTATCATGCCATAACTACTATTAATTACATTTTTTAGAAACAAATTGTGC
TAAGATTATTGGATGGTACATACATGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016720TCONS_00016720Clytia hemisphaericatranscript
TCONS_00016721TCONS_00016721Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016721-proteinTCONS_00016721-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000248supercontigsc0000248:175162..177189 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
59.83	65.98	84	94.76	41.89	31.39	34.08	33.89	27.36	29.68	22.83	21.47	16.08	15.84	11.54	12.83	22.16	21.14	15.63	18.94	19.43	17.19	32.48	36.33	18.71	22.25	50.28	33.64	36.23	38.45