XLOC_009501 (gene) - C. hemisphaerica

Overview
NameXLOC_009501
Unique NameXLOC_009501
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000255:121369..125169-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009501 ID=XLOC_009501|Name=XLOC_009501|organism=Clytia hemisphaerica|type=gene|length=3801bp|location=Sequence derived from alignment at sc0000255:121369..125169- (Clytia hemisphaerica)
CAACCATTAGTTCAAGAGGGCAATGAAATATCCTCAAATGTCACTTCTAA
TGTCTCCTCAGCCATTGGTTACGTTCATTGACTTCAAAGATAAATTATTG
TTTTGACTAAAAGAAGAAAAGGTATTGTTATATTATTGTGTTTGTTTTAC
TTTAATACAACCCCCTTGGTGCTTCTTTGATTTAAATAAAAACATAGATT
ATAATTCCATCATAGTGATTTTTTTTTCAAATTAGTTCTTATAAAAGACC
TGCAAAATGAATAGAATTCTGAGAAATGACGAAATACACAAATAATGTAT
ATGACTTTCGTTTTAGTGTTTTTGTGTGTGTTATTTTCTGTTTGTATAGC
ATTTGTATGTTTACAGCGTACAGTACTTCGAATATTACTTTTTGTTGTAG
AAAAGGCAAGGAGAGAAAATATCACGGTTAACTTTTTTACAGTCGAGAAT
TAAAAACTTTATTATAAAAATGTCGGTGTCTAATGTCAACGAAGAGAAGG
AAATTATTAATGTGGAGGAAACCGAGACCAAGGATTCTGAGAATGAAGAT
GAAAATGAAATTGCAGATGTTAAGAAGCAGCTTGTTCTGTTTGATTTGGA
AGAAGAAAATTGTGATGTGGCGATATCAACCAAGGATAAAGTCATTTTTG
TTAAATCAACCTTTTTGCAGTATGTTTTTGGTGTCCGTTTCAATGAAATT
TTAGCATCAGCAACTAATAATCACAATGAGAATCGTGATGGAAATGTGGA
TGGTATCTTGGAAGAAGTCAAACCTGTAAAGTACAAGATAGACTTGGAGG
CGGAAAACATTGAAAGCAAAAACATCGAATTTGCACTATCATTTTATCAA
CCACTTCAATTCAGTGTCGACGTTGATGGTGAGTAATTAAAAAAAACTTC
TAAATTGACTTTTGACAAAACGTTATTTTGCCTTTTCATTATCATTCGAG
TACAAATATGTCAATTTAGTGGTGTAGAAATGGGTCAAAACCAGTTCGAA
TACAAAAAAGAATACAAGTATTATCGTATATTATCTAATTTTTATTGGAC
CTACTTGGAGGTCCTATAAATTAACCTGTGTTCGTCCGTCCGTCCGTCCG
TCCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCTGGCCAAATTCGATATTTTTTATAAGCACATTAT
CAATTATTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTCATTCTTTAT
GATTTATTGCACAAACATGCATAACTATAAACCCTCGAATGTAACGGANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAGATTTTTGTAAAAGAAGAATTTTTCAGCT
CAAAAAACGCATCTTTATCTATAAGAATCACTATTAATAAGCATACATCA
ATGTTCTTATCCAAATTACCCAATTTTTTGATGAGATAGATGTTTGTTTT
TGCTCACAAAGTCTTGAATATTAAAGAATATTTCAAGAGCATGAAATTTT
GGTTTCCAAACGTTTTTTTATAAGAAACAAACGACTAATTTTAATAGATC
GTCACTATTTGTGTTCTGAATGATTGTTAAATGGTCACGTCACGTAGATA
TCAATTATAAATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATC
ACTTGTTTCATATATACTTCCTTACAGCTACTTGTTTCAAATAAACGCCC
CTCCTAGAGAGAAAGCGTTTATTCAAAGGGGGCGTTTATCCCCCCTGAGT
TCTTTAGAAAGTTCCCTTAAAGGAGCGGCGTTTAAAAGAAGGGAGCGTTT
ATTCGAAGTAATACGGTACCTCGAAATGCTTTCAAGATTATTTTTTTTTT
AATTATGATTTCTACCATAGCATTATCTACAGATTTCGATGGAATACTTG
AAGTATGCAGAAAGTGGAACCTCCATAAACTAAGAGCATATTTAGAGGAT
TATCTTTGCACTAAACACCCAAACCGTCCTTCAAATTCAAATTATATTTG
GACTTTAAACAAAGATCAGTTGAAGCTTATCAAGTTGGCAACCAAATTTG
ATATAAAGACTTTATATCATGAAACGATGTCCCCGACTCCACGCATCGAT
TTGGGATCAATGAAAGACAATCAAGCATTCCAAGATCTTCCAATGTTAAC
GAGATACGAGTTGTTAAGGAATTCAGTTATTCATCTTTTTCAAAGAAAAG
GCCAGTCAATCATTTCTGAAGTAGATGACATTTTCAATTTCTACGATGTC
CTTCTTTACGAGAAAAGAACACCCGACATTTCAGCAAAGAAATCATTTCA
GGAGGAACCTTGCTTTGAATACGATCCAAAAGAGAAAGATTGTTTTCTAG
CAGAACCGGCAGACAAGAGATTTGTAGTTTTGATCATCGAAGGAATAAAA
CTCTATGTCGATTCGTACATTTTAGTTGATAATTCTCCGGTGTTTGAAGA
AATGCTCGAAACAGCTTTCCGAGATGAAAGTGGAAAGAAAGTGTTGGCAA
TGCCTGGCAAAGATGTCAACCAAATTGCTCATCTACTAACATTCTTGTCT
GAACCAAGAGAAATTGAAGGTACTATCCGTTTTATGTGCTCTCCTTTTAT
TAAGTCTTTTACACATTTTTTTATAAGCAACTCAAATTTTTGGGTCAGGG
GTCAGGGCTAGGGTTACTTTTGAGAAATTTGATCTGACCACCCCTGATTA
TACCATATATTTGCTTATTGGGTCAAGGGCTATGGTTTGTCATGGTTGGA
CTATCTTAAAAACATTTTACTTTAGGAGATAATAAAAAAGAATTGGTTAA
TTGCTGAAAGTAATACCTCGTTTGAAAGATGATTGGTATAAAGCCTCGAA
TGATTTTCTAAAATGTTAAAAATAGAGATGGAAGAAAAGAAGAAAAATGA
AGACACTTGATTTTACACTTTTCTCTAACTTTGAACCACGTTGATTTTAA
ATATTTATTCAGATTTTTCCATTTCTGTCTTTCAGATCAAAAGTCTATTA
AGTTTATCGTCCAATTTGGCATACTTTCGAAGACCTATTTTCTTTTGTTC
TTATAGTGAACAATACCGATTTGCTGGCACTGGCAAGCCTTATTGATGAA
TTTGAAATGACCCTGTTAAAAGACAAAATTCGACTGTTTTTGGAGAATGT
CCATGAAGATAAACCTAAAGTTCAGTTGAAGTATCTCAAATTGGTGTGTA
TGTTGAGACTCTCTAGTGTTTCAAAGTTCAACATTCTCAATCAAATTGGC
CGAGGATTGACAAGGTTCTCCAAACTTCGATTGATCAAAGAATTATACCG
TTTGAATTTGGAAACAATAAAACTAGTTGCACAAAATCGTTTGTGGTACC
TTTTGCAAAAAGATTTTGATAATTTATTGGACAAAATACAAGACGAGATG
AATGTCATTTTAGACATATATATGTCAAGAGCGAGCAGAAGATAATCGCG
CTACAAAATTACAACACCAAGATATTCATCACCTGATATTTATTACATGT
AAAATAATACGAAGTAAAACGTTCGTAAGCAGTAGCGTCGTGGCAGGGGG
N
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016973TCONS_00016973Clytia hemisphaericatranscript
TCONS_00016972TCONS_00016972Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016972-proteinTCONS_00016972-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000255supercontigsc0000255:121369..125169 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.86	1.41	1.01	0.75	1.69	1.23	1.15	0.85	0.86	1.51	0.58	1.27	2.81	2.58	8	8.45	3.64	5.35	8.58	9.58	1.54	1.29	5.22	5.78	6.33	7.35	8.81	11.31	4.09	3.99