XLOC_009530 (gene) - C. hemisphaerica

Overview
NameXLOC_009530
Unique NameXLOC_009530
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000257:226032..232113+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009530 ID=XLOC_009530|Name=XLOC_009530|organism=Clytia hemisphaerica|type=gene|length=6082bp|location=Sequence derived from alignment at sc0000257:226032..232113+ (Clytia hemisphaerica)
atcacaccaccaccgtagtaaacatcattatgtctgagattctactatcg accccccccccctggctggAATGGATTGAATATCTTTTGCACTGTTTTTT TTTACGGCCAACTAGCGAACTCTGCAAAAGATTTTACGTTTTCAGCAGAA TTTATTCTCTTGATTGTTGAGATTTCAAGATATTTCTTCTACAGAAAAAT AGGAAGATACATTAAAAGGCTATAAGCCAGCCTCTATAAAATAAGAGATT TAATGTTAGGTTGTGCCCAAAGTCCAACTGCAATTATCGTTTCATTTACA GGAGATaagataaaatggtgaaaaaaaataataaacaacaattggcaaaa caaaataataagaaatcAAATGTGAAATCAAGGCTTGGCATTAAAAATAA CCCTAACTTGGGCAAATTCAACAAATCAAAAACAACCACTAAAGCAATAA TTAAAAAGATAGAGAATGGGGGACCTGGTAGTaagaaagaattgaaattg TTCACAAAACATTTTGATGCTAGAAGCAAAATCAAGCCAAAACAAAGTGA TACAAGATCTCACAAGCAAGGAGGAAGAAATGATGGAGGAAACTTAACAA AGGTGagacacaattttttttaaagaaaaacaaaagtgggTCAAGGCTTC CACAACATTTACACTGTGATAAACCTAAGTATCTCTTCAATAAGTAATTA ATATGAATAGTAAAAGtgaaagtaagtgaaaatattttgttttcattaac AACaaccaaaatatacaaaatactAGCTAAACGTTTTCTTTGTTTAACTT ctttgaaataaatttcaagTTAGTTTCAATCTTTCCACAAGAAAAACAAC CAGAAAACTAAATCAGATGTTCGtgcaaaacaacaacaacaacaacaaca acaacaaaaacaaaaggacaaaaagaatacaaaaaaGCATTCAACAACAG TACAACAAAACTCTGATCGTTTGTCAACATTTACTGGAAAATCTATTCAC ATTGTCGCTAAAAATGATCTCATACCCAAAGCAAGAGAGACACATGTCAA AGGTACAACTtacataattttgaaattttaaaactatCAGGATCTTAAAT TATCAGATCGTGTGAAGGTAAACATGATTTATTCTCTCCTTCTGgaaagt tcttttttgttttgaatagatttgtaattttttatagtattttttataat ataattttttaaattctgacATATTTTATTAATGGCCAAAGGTAAgtatt actttttatttcagtgATAACTTCTCAAATCATCAATTTGTCAATAAGGG GAACTTACTTGAATCTGAAGTGAAGTGGAATTGCGGATTTGCTGAAAACA TTTTATGTGTATTGGTGAACCCTTTTCATAAATTCACAAGATTCTTATTT GTCTGTTTTTCAGGTAAAATGTTATCAGTGACAGCAACAAActcaaaaac aaggaaacaGAGAAGAAGTCCacagaaacaaaaacaaaaacaggacTCAA TACTTTCCAAATCTTTCAAGTTGAGGACCACAAGGCAAGCAATGGAAGAA CCTGAAGATTATATAACACCTTCTTCAATTTTGTCGAAGGTTTGGATTTT GAATCAATAGTTTAACCTTACCTTATTTcctgtttttgaaaattattttc cccatttttaatTGTAGTATTCAACCATTGATAACTTTAGGCCCAGCCAC TTTTCATAACGCATAGATTAAGTAATTAGGACACTtggattttcttcttt aaaatattaaaataccaCAGATTAGCATGATCTTTGTTGAATGTTGTTTC ATTTAATTGTTTTCAGCAACAACAACATCAAAATTCACTTCCTGCAAAAA TCGTCATCTCTAATTTACATCAAAATGTAACCCATGATGATATAAAGGTA ATAAGAAATTACTTCAAttacaatatttaaaaaatcgaagcataattttg tgaatttttccctttttattacaatgaagtgaatacagtcgctctcacaT TGTCTTCTGATCAGCTACCAGAACCGTCAGAAAATTACGGATCCGGTGAG ACCCAACTCACAACCAAGCCATTTGCTGGGatttgctctaccattgagct acggATCCATGTGGAACCAGAGGACTCAATTGCCACTAGGTAGAgctgga agtgaattcttgtctactgactAGACAGAGACAGTGAATTGGGATTTCCG TTTTTCAACTGTTCTGGTGGCTGATCAGAAGACAGCATGACAGCAACTGT ATTCACTTTTTTAACGAGAAAGTAATTAACATAGGGTGAAGGCAAAAACA AGTATAGTTTCCATTTTCTgctttttaaaatttggctATTGGAGACCTTG ATACATGGCCAGGGGTGGTGGAAGACACCTTTCTAATGACCATCCTGGgc atttcagaaaaaaatcactttaaagcAACCTTAAAAGGGAGAAATTTAAA GCGGAAAGACCCCAGTTCAATTCGAGAAAAGCACTCTTTCAGTAAATCAT TGATTTTGAAACAATTCATTTCACTTAAATTCCAGGAGCTGTTTGGTGCT GTGGGAGCATTGAGGGAAGCAAGGCTAAAAAATTTGGGGACAGCTGAAGT TGTTTATGAAAGTGCAGAAGATGCTTTTGCTGCATACAATAAATACAATA CAAGAAATTTAGATGGTATAAATTTTATTGTACTTACTCTTTTGGTGAAT CTAACTTTGAAATATTTCTCGgtgaaaaagaatcaaaattggCAGAAACT CCTTATGGTCcaatgaaaataaatcttttgtgATTGGTAAATTTGTTGTG CTAGTTTCGAATGAAATTGATTATTTTGTAATGAGAAATGTTGGATCAAT AAGTTCAAAAAGTTCATGCAAGCAGATGGCAGATGTTTTACATTCTCATT GTAAGGTGttagaaaatgacaaaaactttttcatcttcatgttACTCAAT ACCTCTTGTCTTCTACAGGTCAACCTATGATTTTGAAAATCACAACTGTT CAAGAAGCTCCAGAACCGCAACCAATGCCTTCGCAATCATCAAGGTATTT TCCCCTATCCTTTTGAAATctatttttgatttgaattcaTCCAAAGGCTG CCAGATCAAAAGCCTTTGGTTAAGCTTTTTATTTGAAGACTTTAATTAAT TTAATTCACAGAGTCATCATTAAGGTGGAGGTGGcatcttctcaaaagcg tatgcttgtgtacagggggaggggaggggaaATGTACGTAcacagagaaa aaaattttatagcccttttttgcttgtaaaatcttttgaaagagaataaa agcGAGCAAGGAAGACTGAATGCCAATATTTGATAATGTATTTGAACTAC ctttggtatatattttcgcgtgttacaaattttcgcgggtacttaattta atactgtttaaatttttcaaaattacaaaatcgcgaaatgaaatacacgc gaaaaaattttcttagtattttgttagtatttttacatcaaaaacgttgt gtttcaagcaaaatcagtctttttcttgctttatattcccactttctgaa aatacctagtttagtgaatcgcgaaatgaaatacacgcgaaaaaaatttc ttagtattttgttagtatttttacatcaaaaacgttgtgtttcaagcaaa atcagtctttttcttgctttatattcccactttctgaaaatacctagttt agtgaatcgcgaaatgaaatacacgcgaaaaaaatttcttagtattttgt tagtatttttacatcaaaaacgttgtgtttcaagcaaaatcagtcttttt cttgctttatattcccactttctgaaaatacctagtttagtgaatcgcga aatgaaatacacgcgaaaaaaatttcttagtattttgttagtatttttac atcaaaaacgttgtgtttcaagcaaaatcagtctttttcttgctttatat tcccactttctgaaaatacctagtttagtgaatcgcgaaatttaatacac ggaaaattttccagaagtcggcaatcgcgACTGAGATCGCGATGAGAAAT AGAAACCTTTCACTTATCTGTTTATTCTGATATTTCATGttattattatg tttttttgtcaacttttacgcttcttatacgcatcaaagaaaagaaaaag tttcataaactaaacaaaaaaacattgaGTTTTGTGTAcgaaataaaggt ccgaaccaaacgattcgtatgaaaaagtaagtacttaccagggggtatag cAATTTGCGTaggcttgcgtacaggggggaggtagtcgattttcgacatt gcgtacgtactatatttGGACGGCCCCTCAGATAGATTAGATTTAGAAGG TAGATTTTGAGTTCAACTTTGTACGTGCAATTTAGATTTCTGAAATGAAT TTTCTTATTCTTATCTTCAGGAGTTCCATGCCATACTATGAAAATAGACC ATCACAAATATACAGCAGTGGTGGTGTAAACGGTGGTGCCACCCCGCTCA ACAAAAGGTTCAATAGCGGTGCAAGCTACACATCAAATGCACCTGCAGCC AAACCTGTTGTCTTCACTGTGCGACTGTGATCCATATCACATGTCCTATG ATCATAGTGAAATTTCGACCCGGAATGGGTTCAACCCTTTTGTATATATC AAAAGTTTTATACGCTGAGCTTTAAAGTCTCAATTATGAGAATGTTCATA AAGCATGACCAGCTATAATTGTATAttttatataccaaaatttTTACGCA AAAGCTCTGGTCTCGTTATGTGAGAGTCATACTAGAGGTCCCATTTGCTT TTGCTTGAGAACCTACCATactgaattttatattttttatcatgGGTTAG TGTGACCCAGATTCAGTAGTTCTCTCATATGTACTGTTGTTGAATGCTTA ACAGACATTAGTATTGGTCAAACACACTCAGAAGTTAATTAAGTTAAGGT AAGTATATTTTTTGTtacgattttttctcaattttaaaggCTAGTTAGAG GCTAGTTTATTAGGCAAGTCACGGAATAGTTTATAGGAAAGGGTagattt attattttgatttagATGTTTACGCGTAACTCCTTGCGTGTCAGGAGGGg ttaaaaatttcccaaaaacgCTACTTGTTGAATGTATCTTATTTATGATA Taaaccattgcaatgtcttccacgaacccagctgattggttgaaaatgac gtattgactgattttacgtcgcTTACGTGCTCTTTCAGAATACTCGTTGA AAAGTTTTAGATTAGAAGTAAACAGGTTCGTTCACCAACttctaatagac cttatcggagtttttgatttttttaaaaaagcgctgcattgtgggattgt ttcgagtgtattacaatagcctcggaatctcaccctgatatgcttattga agttattcttataaaaagcgtgtattttgtAGTGTTGTCAGCAAGATAGT TCCTATTGTTGAAGCTTTGAAGAGGtgtatcaattttaatttttaccttt ttgattTGGATAATACATTTCGATTTTGGTTAGTGTTCGATGTGCACTtc caaaacataaaatttttgcATAAAGTTGACTGAGGATATATCATTGACTT GTCCCCATCCCCACAAATTAAGTTTTAATCCCACAAGCCATCTTGTTTTT TCTCTCCTGACAAGCACTAGTGTACATACTCCCTGGGAATTCCGTCTTTT TTGTCCTCCTGCGGGACAAATTTTCTTCACCCTAGATTAAAGACCAGTTT TGGGAAGGGTCGATTTCCATTTAAGCTTAATCGTCTAAGCCCTTCCCACA TCCTAGTATATCCTGCTCTAGAAGTTTCATTTTCTTAGTTAGAGGAAACC AGAGACTAAAATGGAGTCATGTGACAAtgaaaggaagaagaagaaacatg ttttttcaaatatatttttaccTCCTTGAAATGTAAACAGTTTTTATCGT GTTAAATTATTTTAGCAAAGTAACAGAAGAAATCAACTTGAtcatttttt gaacttttctattttgtgtTTTATTGGTTTGGAACACTTTAGAACACTTT AAGGTACAAAAATTCAGGGAAAACCTGGGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017041TCONS_00017041Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017041-proteinTCONS_00017041-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000257supercontigsc0000257:226032..232113 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.04 26.89 34.85 37.15 38.76 28.91 30.82 32.34 21.68 20.2 18.35 22.28 22.03 22.79 18.73 16.94 28.18 32.8 14.13 17.73 24.99 24.37 22.24 22.05 38.24 42.88 24.6 18.49 15.45 17.17