XLOC_009605 (gene) - C. hemisphaerica

Overview
NameXLOC_009605
Unique NameXLOC_009605
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000260:80814..84147-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009605 ID=XLOC_009605|Name=XLOC_009605|organism=Clytia hemisphaerica|type=gene|length=3334bp|location=Sequence derived from alignment at sc0000260:80814..84147- (Clytia hemisphaerica)
AAAGATGGTGTAACGAGCTCGAAAGATGGTGTAACGAGTTCGAAAGATAA
TGTAACGAGCTCCAAAGAAGATTTAGAAGACCAAACCAAGGTTACTTTAA
ATAAAGAGGAAAAGAAGAATTCTGGAAGCGACGAAGTTGCTGATGTCGAC
AAAGCTGATTTCGAGGAAGTGGAAAATGGTGAGAATAAGAAATACGGAGA
AGTGAAGAATGAAAAAGAACAAAAGGACGAGAAAAAGAAGAACGAACAAA
ATGACGAAGAAGCGATTTTGAAACTCGGAGATGAAGAAAAAGACAAGGAA
ATGGAGAAGGAGGTTGCCCAACAGGAAATTGACAAAATAAAAACAGCCCA
AAAAGAAACTGCCCGAAAAGAAACGGAGCGAAAAGAAAGTGCCGAAAAGA
AAATTGATCAACTTGCAGTCCAACAAGCAGCTGCCCAAATGGAAATTGAA
AAAATTAAAACGGCCCAAAAAGAGGCTGCCCGAATTGAAATTGAGAAAAT
CAAAGCTGCCCAAAAAGAAGCAATACAAAATGTAGCTGCCCAAAGAGAAG
CTGCCCGAAAAGAAATAGAAAAAATAAAATCGGCCCAACATGAAGCAGCC
CTAAAAGAAATTGAAAACATTAAAAAAACCCGAAACAAAGCAGCCCAAAA
GGGAATTAACCAAAAAGAAACTGGTAGCACTGAGTTGACAGATGATATCA
AGAAAAATCAACAGGAACAAAAACTGAAGTGTAAAAACAAGACTATCAAC
GGTATGTAATTTCAATAGTTTGCAGAATTTGAAAGTTTAAAAGTTTTTTT
GCTCAAACATAGACCAAATGGAACACATGAAATAACTATATAAGGTTAAA
CAATTTATTGCCACGCAATAGGTCCAAAATATACTTTTGCCAGATCGATT
CTCAATATTCCAGGAATATAGGGGGATAATAAAATAGCTGTGGCTCAATC
CGTATATTGTGGTCTGCAAACTTTCCCTTATTATTCGTCAATATATCGTG
TAGCCTAAGTATTAGGATGTATCAGCATCATAGAAAGGACGTTGTTTTAA
TGTTAGCTCTGACAGCTGGATACCACTTAGGTTCTTTGAAACATAATTAC
CATTTTTTTACAGCTGTTTTTGATGACTGCACTGTAGAATTTGATCTTGA
TTTCGAAGATTTGATGAAACTCAACAGAGAATACTCGATAACATATCCTC
CAAATACTTTTCAAATACCTTGTGATCATGAACCATGTGATTGGGATCTT
CGACCAATCAAAGCCTTGTATCATACTGAAGAACCAATCAGCTTCCAGCA
TCATCTTAATGAACCAATAAGAATGCTGCATTATCATCAACGCAAAGGGA
AACACGTGTCACATGATATTCACGTATTTGATGGCCGTAATCATAAACAA
CATTTTGGTAAAATCATATTATATATAATCATATAATATTATATCATATT
TCAGCCCCCTCTCATAATATCCAGTAGTCTCCTGCTCGGGCTCCTGCTAC
CACCATACACGCTTTTTTATAAGAATGGTGTAAATCCATTTCATCATGGA
TATTCTTAACTTTTTTTTGGGAAAATCATCCTAAAATTTTCTTACAGTAT
TCTTAGGTTAGGACCATAGATTTATAAAGCCCGAAGGGCTAGATGTCGTG
CTTTAAGCCATTGCAGGCAAAAACAAGTGAATATCGGAAAGAATATTGTT
GCTATTGTTTTTAAAAACCCGCGAAGCTTCTGATTGGTCAAGCGCTGAAA
TTCTATTGTAATGTCACGTGATTTAGGTAGGATTTCCTACCTAACCACGG
CACACTTTTCAGCAAAAGTACGCCATCTAGCCCTTCGGGCTTTATAAATA
TATGGTTAGGATCCTTATTTGGACTAGATTTAACATTTGGTACATACGTC
TCAAGTATAAAATGGCATTTTTGTGAAAGGAGTGAGCCTTACTTGGGGAT
AATTGACAATTTATAATTGAAAATGCTCTAAAAATGGCATTCTTAGCTTC
AGTAGCCAAATTCCATGATGGTGATATTCTTAGCATTATTCTTAATTTTT
TGGCCATTTTCTTCATGGACATTCTTATAAAGTGTATTCTTATGAAAAAA
AGTGTGTACTCATAATTTATGGTTGGATTGGTCATTACCACAAGAGGGGA
ATTTCCCATAGAATCGTACCACGGAATGAAGAAATTAGTCCACTAAAAGT
TCTTTTATTTATCATTGTATCTCCAGAATGAACCTGTCTTTTCAATGGAG
TTCTCGTCGTCACACTCATCTTTTTGAGGATGGTACACGTTTTTTCTATA
AGAACATCCAAAAATTTTGAAGTCTTCGGATGTTCTTAACTTTTTGATTT
AACATGTTCTTATTATTATTATCTTAGTTTTTTTGTCCATTTTCCTATGA
AACTCGATGTTCTAGAGTCTACAAAGCTTTAAAAAATTCTTAACTCGTTC
TTAATATTTTGGCCATCGAAACCTTATGTTCTTATATAGTTTGTTCTCAT
TAAAAAAACGTGTAATTTGAAAATGGGCTAAAAAAACAGGGGATTGTTAA
GGCAGGGTCTTTACTTTATTCGTTTTCTCATTTTCAGTTTCGCACGAGTC
ACCGTGCATGAACCGTGGTATCGCTTTACCGACGAAACACGATTATCAAT
GTATCTGTAGAAAGGGATTTTACGGAGCTGTTTGTTCTGGTTAGTATAAA
GTTTTTGGGTAATATGGTGGTCGCCCCGCCTTAACCTCGTTCCCTGATAC
ACAAATATGAAGTTAAGGTGGCTTTCCTGACCAGAGAGATTATTATTCTC
AACGTGCTGTTAATCCGATAGTTCAACTGTCCCAAGATGGACTGATTTAT
TTTTATTTTCCTGTTTTTAACAACCCAACCAGGAACCCTTTGGGATGAAA
AAGGAACCCCGTCCAGCAGGGAATTTGTTAAGTCATTTATAATCTGTGTA
ATAAATGGATGTTATATGATGATAGTCACGGGGTAATATTATTTTGTATA
TTAAACTATTAAAATTGGACCCTTGCAATATTTTGCAATGTCTGAATTAA
TCATCCAGCATGCTAGACCAAGGCATTCCTGGTTCCAACCCCGGTCCCAT
TTACAAAAATTGAGCGATTATTCACCGGAGAAAAACGGTTTTTCGATTTA
AATTTGGATAATAAGTACTTTTTTATTTCTAGGAATTGATCATTGTGCGA
GAAGGCCCTGTTTACATGGTGGACATTGTCACGTGACNTTCTAGGAATTG
ATCATTGTGCGAGAAGGCCCTGTTTACACGGTGGGCATTGTCACGTGAAT
GACGTCACGCCTGGTTACACGTGTTCGTGCCCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017170TCONS_00017170Clytia hemisphaericatranscript
TCONS_00017169TCONS_00017169Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017170-proteinTCONS_00017170-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000260supercontigsc0000260:80814..84147 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14	0.03	0.16	0.08	0	0.04	3.51	3.7	0.17	0.68	1.01	0.37	0.37	0.24	0.43	0.48	0.83	1.35	0.66	0.46	0.5	0.88	0.99	1.37	6.97	5.19	0.24	0.05	0.27	0.23