XLOC_009729 (gene) - C. hemisphaerica

Overview
NameXLOC_009729
Unique NameXLOC_009729
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000266:93839..101589-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009729 ID=XLOC_009729|Name=XLOC_009729|organism=Clytia hemisphaerica|type=gene|length=7751bp|location=Sequence derived from alignment at sc0000266:93839..101589- (Clytia hemisphaerica)
GGTTAGGATAATTCTTTATTCTCGGAAATAAACCAAAACAAAAATTTTTG CAAGCAACATTTTGAATTAGAGCAATGCAGACAGCACAACAAAGAAACGA GAAAGAAGCTGATTAAATAACTATCCAAAAGGACTGAACAAACTATGCAA TGGTTTTTCAAGGCATGTTGAATTGAGGTATATGTTATGAACCCTTATAA ATTGTTTTGCTAGCATCATATTCCCTAAAAATTATTACTCATTTGTCATC ATGTTCATTGATCAAACACACTCACAATTTTTGCTTAACGGACTCTCTTT ATTACGCCAAGATGAAGAATTATGTGNAAGTAATTGAAAAGAAATCAACC AGAACATCAAAAATTCCCATGTTTTGATCTTCACACTTCTTCCCTACCAT TATTGTTATTTTTATTTGGATGCGTGGTCAAACACCGAAAAGAAAAATCA GGGAGATTTGCAAAGCAGCGTATGCACCTTGCTGATCGCCCGCGCGGTCC ACCTAAATATTTAGGCGAACACGGTCCACCTAAATATTTAGGCGAACACG CATAATTTCTTATACGCACGCCACCATTCAGATCTCTGATTCGCTTGGAC CAACCAATCAGAATATCCGCATAATCATCCTCAGATGAGANTGATGAGAA AAGTGTTGCTCATTTGGTGGACTTTGCTTATAGTGGGCATATCAGTATAA ATATAAACAATGTTGAATCATTATTGATATCAGCCAATATTTTACGTGTT TCAAAAGTTATAAAAGCATGCTCAGATTTTCTAGTAAGAAATCTTCACCC CTCAAATTGTTTAGGATTTTTAGAATTTTCAGAGAGACTATCACTGTATG AATTACAAAAGCTATGTATGAACTTTTCAGCTGAACATTTTACTGAGCTT GTAAACTATGAGGAGTTTTCATATGCTAGCATTCAAACAATAAAAGACAT TATTGTACACAAACATCTGAATATTACTTTTGAAGAGGACATTTTGGATT TTATTGAAAAATGGGTTTCATTCGACAAAAAGAATAGAATGATTTACTTT GATGAGCTTTTTGATGAAGTTAATCTATCCATGCTTAGTATTCAATCTCT GGTGGCTTTACTTACACGATCTATGAAAATGAGAAGTGACATTACAAACT TAAAATTACAATATATGCTCAATATGAAGCGTAACCCACAAAGGCTAGCT GATAAAAATTATCAGAATGGTTATAGACAGAGAAGAGAAAATGACAATGT CATTGTCATGGGTGGAAAAGATAGTTATCTAAGCCCTTCATCGACTGTTA GCAAATTCGACATCAAATCAAACACTTGGAAACCTTGTAAACTCCTCAAT CATGCAAGATCTTCTGCAAGTGCTGCATATCTACAAGGTACTTTTTATCA TAATTTTTTCTGGAGGGATATTTTGCCCTTCCAAATGATTTATTTGTATG AAAAATCATTGTTTGTTCTTTAACTGTCTTTACTTCACACCTGATAGGGA TGCTACAGTAGAACAGTTTTCTGATCATATGATCTTGGTTTAATATAAAA TAGACTTCATGTTTAAAAAAAGGTAAACAAACTAACCAGAATGATTTAAA AGAAAGAAAGCAACAGTATTATAGATCATTGTTTTCAAAACTAAAAAAAA ATTACTTCTAAAATAATTACTACTGTAACATTAGTTAAGGAATCAAGAAA ACTAAATTTTGATATTGAATAGCTCAATAGCAAAAATAATGTTACAAAAA ACATACCTCATAACATACCATAACATAATCATTTTTTAGATCACATATAT TTGACTGGTGGTATTTGCGAAAACCAAGATGGAAGAGGCTCAACACATAC ACGATCAGTGTCTTGCTTTACAAACAAATCAGATAAATGGTTCAATATTT CTCCTATGAGCCAACAACGAAGCAGTCATGTCACTATTACTCATGGTAAG GCTCTTTGTTGAAATAGGGTCAAAAATCTTTGCGAATGATCTTTATTTGC AGACTACAATAAAAAGGAGGAAACTGTGTATTGTATTTAAAGTTCCTTTT GTTGAACCATGTTATTTTCTGGGTGACCTGATGCACTGACAATTTTTGTA ACCTGGCTTTTATACTGCCAGACACTTTAAACTATTCTTTTTATGATATA GAAAAGAGGCGAACCTCTTATGCTGAAAAAAGCTGGAATTTTTGTGCTCG CAATGCACAGGAGGGGGAGATATGTTAAGTGATGTCTTTTAATCTCTTAT TTTTTTTTCCAACTCACCACTTTTAGTGCACCACTAAAACTATCAATCAT ACTTTTCTGATCTTAAATGAAAAGTGACAAAGTAAAACTTATGGGTACAA TGTCTGCTGCAATTTTCAAGCAGGACAGCATAAAAAAGACTTAGTACAAC TTTTTGAATTTTTATATTGTTAGAGGCACAAGTCATAAGGAAGTTTAACA CAAATGACTATTAATGATCTCCAACAGCGTGGTATATGCAGCACTTCTAC TGAAATAATTACCTTACTACATAAATATTACTAGGCAAGTATTTAACGGC CTTGAAATTAACACTAATTTTTCTGCTTTTTTAAGGAAACATCGGCTGGT TTCAAGTAAGGGGGTTTTATGACCATGAAGTTTTTCAATTCGCGTTAATA AAATGACTAGTAATATTCGTGTTATAAGGTAATATAGTAGTAGCTTAGAA AAAAGGCATGCTTATTCGTGTTGACCAAAATCTGTTTTGATTGAAAACAT ACTTAGAATATGATCGCTAATAAATGAATGCAACTTAAATATTGTTCTTT GTTAAGATAGCTGTTAATAAAGTTGTTAAAGTACCCTATTTATTGACCGT AATCGCTAGCTTTGAACTTCCGAAAATAGTTGACATGCATTAGTGACAAG ATGCAAGCTTTCAAACTTTATCCCCTTCGGTTATATTACAATAATAGCAT GCACGTCAGAGTATCTATTTATAGATGACCAAGCTTCTCCTTTTTAATTT ATACCGTCTGTCTGTCTGAAGACAGAATTTCGAAAGAAAAATATGATTTT TTCTTTTCGTTTTCATGAAAATTTAATACCATTTTTTTTTGGATTTATTT CCCCTATCTTGCTTCTTGTTTTTTTTGCGCACGATTTTACAATGTTTAAC TTTGTATTCTCTTACAAGTTGTTATCCAGGTCTATCCTCTCTGCTACTAA TCTTTCATCACGCGATGGTCTTGTAGGATTTATTAGATGCAATTTTCATG ATATTCCGGAAACCAGGGGACAAAAATCCGTTTGCTGAATTCATTTGTTT CTGAATTTTATGAAAGTGATGGCTCCGTCAACGGGTTTAGCGGTTTTCCG CGCTTGTATTTTGATTGATTTTTCGAGAAAGCAATTATTTTATACGTAAT GACTTTCTGGAATTATCCACATCACTTAAAAAGACAAAGGATATTTCAGA GATAATAAGAGAAATATTATATATAATATTGTATAACTTCATAACGTTAC GAAAAGGGGCGTGTTTAGGTACTGTCTACCTTTCACCAAATGTATAGCAT TTTCATAAAGCCCATAAACGCTAATTTGAAATTGTTTCTTCTAAAATCTA GTGTAAAATTCAACTTGGTGTTCAAAACAAAATCCTGAACACATAAAGAA CAAATATGAAAGCGGTTCATTCTAAACATAGATCTTTAATTTCTTCTTAT TGGTTTTAAATTACGAAACAAACATAGTATTTTAATCGACATCGGTTATG AATACCATAAAAAGTTACAAGAATTAGTTTCTTAATTGACTTCGTGGCTT TTTTAATTAATGAAGAAGGTATTTTTGATGCTGGTCCTATATTCGAATAC TTATAAGCCATATTTTGATTTAATATACTTACTTCCATCCCAATCATAGA CAAAAGAAGACCTTTCTTTTGACCACTTAGCCTTACATAACAATACTCTC GTTAGACGACTTAACATTTTACACCCATTCAGTACCTTACTGATTCTTAA TAAAATTTACTGGAAGTCTTTTGTCAACGTTGGCGTTAATCATAATACAG CTTGTTTATGTGTTTTTAGCTTTTCTGTACATCTCTAGTATTTTAATGCT CTCTCTGCCCTTTGGTTTTTTCTACTTAATCGGTGGGGTATTTTATACGG ATGTACCTCCATTGAGGGACGTTTTTGATTCTTGATATATGATATAGAAA CACAGAGGTCAAAAACCGGCTTTTATGGGTGCTTCCGTTAAAAAATATGA CGTCATCTTGACTTACGCATATCAAGAATACCAGGGAAAGTTGTAATTGC AGAACTCGGATTACCTTTCACAGAAATTGATCTTACAAGTTTAGCTGGAA ACAAACTTTAGAGTTTTGTAAAATAAATTCGACAGTTAATTCCAAATCTT GGAATTAACTGACGCAAAATGATATGCGTTTTCCCATTCATTAAGAATCA GAGAGCCCTGTTTAGAGCTGTTGGTAAAAACGCCCTTCTACGTTCACAGA AAAGTTCCCAACTGTCAAAAGTATGAGATTTTTAACCGAGTTTCAGTTGA TTTCTTTCTTTTTCTTGGCCGTTTCGCCTCACTTGTCTCCATCGGGGCTT AAAAAATCTTCAGGGTATTAGGGTGTTTTGATGATGTCCCTTTTCTCCAG TGCCTAATATACGTCTCGATTATCAATTTTCGAAAATGTCTTCAACTGTC TACAGAAAGAAGTCTCTAGTTTCTTTCTTTCTGCGTTGCTAAGTGTAAAA GTCAAGGAATATCTTTCGTTATTATTATTTCACTTCATTTTCATAGGGAA TAAAGTTTATGCGATTGGGGGCTACGATGGTCAAATGTCTTTAAAGGTAG GTGAAAATATCAATATTTTTAGACCTTTACTCAGAACGGATCATAGTTTG ACGTCATTCAATACAGAAAATCAGAACCTCATTTAAACTTGATAAGCGAT ATTTTTGTAGTAAAGATGGAGATTGGTTTATATTTTGAAAACCACAAATT TGTCTCCTTGGGAAATACACGTTTTTTTTAAAGAAACTAGTTTTACCAAG CAGCCTCAATGTTTCTTAAGAAATCGGCCTTTTGAGCCTTAAATGTTTCT TACATGTTTCTAAACNNNNNNNNNNNNNNNNNTTCTTAAAAGTGTGTTTC TTAAAAAAAAAAACGTGTATTCTGAAGATCTTACATTGAAGACCTGACAT TTGATGAATTGAAAATCTACCCTAGTTATGGGGAAATGCAAATCAATGGC GCTATTTTTCAACAATGTCTCTTTGTTTTAATAAGAGAAAGCCGTGAGGG AAAGGCGAAAATACCCGTTCAAAAATCTTTCCCGCGGAAAAGACACATGA AGTGCTGTTTGTTACGCCGGGGGGGGGGGGCTCTATTCAAAAACGACCAT ACGTGCGGCCCAGAATTAGGCCTTTGAAATCGGACCCTTACAGAGAAACT TTTGCAAAATTTGAGCGAAAAAACGACCCTTGCGGTGCATTTTCTTGAAA AATTTTAACCATTTTAAGACAAAATATGTTCAGATTTTCGAAATACACCC TTAGAATGCAATTTTTCTCATCTTTGCTGATTTCGACCCCTTACAGTGTA CTTTGAGAAGCTTGGAAAGTATACCCTTAAGGGCCGCACGTATGGTAGGT CATTTACCTTGAGTGCTCCCCCCCCGGGTTATTACGGTCATGCATTATAC CAAATTTGGCGAGTGAGGATAAAATGAAAAAAGAAAGTTTTTATGGAAAT GTAAATTACATTGTTTTAAAAAGAGGATATTTTAATTTTTATTATTCCCC AAGGGTTTTCAAATTCCTTAAAGAGATTCGAATATTCCTCTTCTGCTTTC TAATAATAGTTTTGGATGACGGCGCTGTCCAGTCGCTTAAAAAAGTTGAA ATAGAGATGAGGGCTCAGCGAGGATGAAATTTTGGACTATTTTGCTTGAT ACGACAAGTTTTGGAACGTGTTCTTCAAGTGGTTAAATTCCCATCAGGTC TCTGCCACGAAAGCTAAAAGAGTCTCATTGAAATAACTCCTTTTTACAAT TCTTTTAAATAATGGATTGTCAATCGAAATTTGCTTCATCGTTAGAATAA GCTCTCACCCGATTTAATTAAAATGACCCCTGTGATATTTTCAAACGCTT ATTTACCCCTTTCATTCACTAAAGTAAGATTTCACCAAGGTCTGCCAAAG TTAAAAAATCATATCATTCGCCATCTAAAAAACTCGTCAAAATTAAGAAA AAATTTTTTTCTAAAGTATCTTCGTAAGCAAAAGTGACGTCATAGGTTTT TACTATTGAATATTTGATGATTCGTGGACGAAAACTTTCGCCTCCTATGA ACGTTTATACCAGAATTCACCTTTTGTTTCTCTTAGTCTGCAGAATGCTA TGACCCTTACACTGACACATGGACCGAAATCGAGAGTATGAACTACCACC GGAGCTCGTTCGCTGCCGTCACCATGGATCAATACATTTACGTGTTAGGA GGACATAACACGTGTACCGTCGAACGATATGATACGTGCAATGCATGTTG GGAATTGATGCCTGCCATGAGCACCAAGCGATTGAATTTCGGAGCAGCCC AAGTCTGTGGTTTTATTTATGTCGTTGGTAGGTATTTTACCTTAATTAAG TAAAATATTTCTCGCGGTAGCTAAATTTAACGGGTTTTTAGGAATTCTTT GGTTATGTATGTCGTCCCTGCATCATGTTTTAGAATACTTGTGGAACTCT TTTTTCAGTATCATGCTGCTAAGAGAACAAACACTTTACTAAGTAACAGA AATGAAACCATCTGCAAATAGACGATATCGGCTTTCCGAATTCTCCCCGA ATGATTACCCATGATGCATTGGTATCGTCATCAATATCGTCCGTGAATTT TTTTGCACAATGCATCATGGGTAATCATTCGGGGAGAATTCGGTAAAGCC GATATCGTCTATTGGTATTTTGTGATTCAATTTGTTATCTAGCTTATCTT ACGTCAGTGGAAGTCAGTACGGTCTGAGGAGGTTACGATGAAAAAGTTCT TTCCATTGATGAAATATTTCTGTTTTCTTTCGATGAACAGGTGGTCATGA TGGTCGTGAATATCTTCGAAGCATGGAACGATTCGACCCAGTCTCTAGCG AATGGTCGGTTGTTTGTCCTATGCCGAGCGTGCGCAGCGGTATCGGAGTC ACGGCTGCTCAACATGAAATTTTCGTCTTCGGTGGACATAATGGATCACG TTATTTGAGCAGCGCGTACAAATATGATGTTTTTCAAGATAAGTGGACTT CTATACCTGATATGACTACTGCTAGATGCGACATGGCTGTTATTTCGATG GACTCGCCAGAAAATTGAACGTATGTTAATTGGACAATGTTTTGGTGTAC AGTGTGTTCCAAAAAAGAGGACAAATCCTCAAAACACATTATCTAAACTG GGTTTAGATTAATTGAACTAAGATTACAATTCTCTGTTCAATCAATAGAT ATTCAATTCACAAGATGATTGTAATAGGTTTTTGAGATTGAAATATTTAG GTACACAAGTCATAAAATTTGGCAAAAATTATGAGGATTTTACTTTATAT GAAAATGTGTCCGCTTTTTAAGGACACACTGTATATGGTTGTTGCCTGAT AAGAATTTGGCTTTGGGCCTTACTGTTATTGAGACTGGAACCAAGCCACG TGATAATGAGCATAATGTTTATAAATATGAAGGCTCTGAGTGTCTTAGTG T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017381TCONS_00017381Clytia hemisphaericatranscript
TCONS_00017380TCONS_00017380Clytia hemisphaericatranscript
TCONS_00017379TCONS_00017379Clytia hemisphaericatranscript
TCONS_00017378TCONS_00017378Clytia hemisphaericatranscript
TCONS_00017377TCONS_00017377Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017377-proteinTCONS_00017377-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000266supercontigsc0000266:93839..101589 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.57 10.39 5.11 4.62 8.74 6.41 14.72 13.84 12.92 8.46 12.87 14.7 14.68 19.43 15.88 17.36 26.06 25.36 12.04 5.57 18.73 17.07 21.05 21.51 18.26 20.37 9.02 7.8 8.82 11.62