XLOC_009789 (gene) - C. hemisphaerica

Overview
NameXLOC_009789
Unique NameXLOC_009789
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000269:115084..119452+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009789 ID=XLOC_009789|Name=XLOC_009789|organism=Clytia hemisphaerica|type=gene|length=4369bp|location=Sequence derived from alignment at sc0000269:115084..119452+ (Clytia hemisphaerica)
TcacaatcttaaaaatctttatttcaaattaaagTGCGTTAAAATAATTC
TATAAAACCCTattaagaaaaacttaaaaattttctatttttaaacgATT
CTATGAGTGCATGTCTATAGCTATAGGTTTCTGTCACAATTAAGTCAATA
AAATCATttctaaaaatcataaaatctatAATCCTTAAGACTGCTTAAGA
CTAAATTATTATACTATAAAATTAACCTATCAGACCAGCCCTACAGTATA
GTTGATAATAGAtcactatttaaaaaaaagaaagagaaaaatatatgTCT
TTTCAATGAAGAAATATAGCTTATGTCGAAGTAGTGAAATTATTATCGGG
GACAAAAGAACGGAGGAATACTTCGAACTTTCCACAATTTTACCAATTGG
TTGAGAACATTGTATAAAGTGTATGTTATCAAGACCGTAAAAGTAAAgta
taaaatttgtaaaaaatatgaaattattttgttgCATTGTATTATAAGTA
TAAATAGTGAATGTAAGTattaaaaaaggtcaaaaagaaataaagttCAC
ACCATAGCTACAAAAGCTGATCCAAGCATATCCTGAACTATTTCCCTCTT
TAGATAATGtgatttttttctaagaaaatagaCTGGATTAGACACTCTAA
AATACAGATAAGTAACACTctataaaacaaagaaatagaAACACAAGTta
gtgaaagttttaaaaaacgaagaaaaaaatctgaaaatcagcCAGTCAAA
AAGGGGAAACTTTTATCTACTGAGAAATACTTTCAGCCATCTGATCCttg
tattttgataattttacgTCGGATTTTGCCTAACAGCATAACCATCGCAA
TCAATCCAACGATACAAAAACATAACATACTAGCTGAGAACTGCAAACGA
TGCTCAAAAGCTGCTGCAGCTATGATGGGTCCTAGAATCAATGAAACACG
ACTGATTGATGAATATACAGCTTGAGTGAATCCTTGAGTCTCTCTCGGTG
TCAGTTTTGTGGTCAAGGATTTGCCAGCCACAAGGTTAAGCGGGATGGCC
GAAAAAACAAATACACATATAATAACAAATACTGCCACTCGAGCATGTTT
GGGTACAACAACTTCAACCATCAGTAGCAGAAGAGCCAGACTGGTCAAAA
TTAAGGAGATTATGATATAATGCTGGTCTTTGATTTTGGACTTTCCTGAA
AATTTATACATTAGGAAAAAGACAAACATTAGCCAAACACCACCAACCAT
ATAAACACCACTTGTTTCGGTTTCTTTCCAACCATAACCTTCTTGTGTAA
TCAAGGGCAAGAAAACTTCAAATTCAGTTTGAATTAAAGACAAAATCAAA
TCAGAATAAAATATAGCAACAATTTCGATTGTGGTGATCAGCTCTAGAGC
TTGTTGGAATGCGCTTTTCTTTTGAACAAGTTTGATTGAATCGCCATAGT
CAGTTGTTGTCATTTGCGATTCATCGTCATTGTAAAATTCTTCATCATCC
TCAGTTACAATATTATCATCAATGAAGGTTCGACCATTTGCTGCTTTATA
ACATTTGAAATGTTTACGATACTCCTTTGGTACTAATGGTTTCTCGTCAC
CATAGGTCACATCTAGTACAGATTCACATAATGAAGTTTCTCTGACCCTC
TTGAAATCAATTTCATACTCTGTGGGAGGAACATTTCCTCTTCTATCTAA
CTGCATGTTAGGGTGATACTTTGCACGTTCTTCAATTAATAATGAGAGGT
TTGAGATGTAGAACACACTTATTAGTTGAGCTAGTAACCATAAAATAGCC
ATGAATAAACCAGGTGCTGTTCCATTGTCTATGGTCCATTTTCCCATAGT
GAAATCAACCTTTACTAAAAAGAAGTTCAGAGCTGGNaaaaattttctat
ttttaaacgATTCTATGAGTGCATGTCTATAGCTATAGGTTTCTGTCACA
ATTAAGTCAATAAAATCATttctaaaaatcataaaatctatAATCCTTAA
GACTGCTTAAGACTAAATTATTATACTATAAAATTAACCTATCAGACCAG
CCCTACAGTATAGTTGATAATAGAtcactatttaaaaaaaagaaagagaa
aaatatatgTCTTTTCAATGAAGAAATATAGCTTATGTCGAAGTAGTGAA
ATTATTATCGGGGACAAAAGAACGGAGGAATACTTCGAACTTTCCACAAT
TTTACCAATTGGTTGAGAACATTGTATAAAGTGTATGTTATCAAGACCGT
AAAAGTAAAgtataaaatttgtaaaaaatatgaaattattttgttgCATT
GTATTATAAGTATAAATAGTGAATGTAAGTattaaaaaaggtcaaaaaga
aataaagttCAAACCATAGCTACAAAAGCTGATCCAAGCATATGAAGAAT
ATCCTGAACTATTTCCCTCTTTAGATTATGtgatttttttctaagaaaat
agaCTGGATTAGACACTCTAAAATACAGATAAGTAACACTctataaaaca
aagaaatagaAACACAAGTtagtgaaagttttaaaaaacgaagaaaaaaa
tctgaaaattagcCAGTCAAAAAGGGGAAACTTTTATCTACTGAGAAATA
CTTTCAGCCGTCTCAACCttgtattttgataattttacgTCGGATTTTGC
CTAACAACATAACCATCGCAATCAATCCAACGATACAAAAACATAACATA
CTAGCTGAGAACTGCAAACGATGCTCAAAAGCTGCTGCAGCTATGATGGG
TCCTAGAATCAATGAAACACGACTGATTGATGAATATACAGCTTGAGTGA
ATCCTTGAGTCTCTCTCGGTGTCAGTTTTGTGGTCAAGGATTTGCCAGCC
ACAAGGTTAAGCGGGATGGCCGAAAAAACAAATACACATATAATAACAAA
TACTGCCACTCGAGCATGTTTGGGTACAACAACTTCAACCATCAGTAGCA
GAAGAGCCAGACTGGTCAAAATTAAGGAGATTATGATATAATGCTGGTCT
TTGATTTTGGACTTTCCTGAAAATTTATACATTAGGAAAAAGACAAACAT
TAGCCAAACACCACCAACCATATAAACACCACTTGTTTCGGTTTCTTTCC
AACCATAACCTTCTTGTGTAATCAAGGGCAAGAAAACTTCAAATTCAGTT
TGAATTAAAGACAAAATCAAATCAGAATAAAATATAGCAACAATTTCGAT
TGTGGTGATCAGCTCTAGAGCTTGTTGGAATGCGCTTTTCTTTTGAACAA
GTTTGATTGAATCGCCATAGTCAGTTGTTGTCATTTGCGATTCATCGTCA
TTGTAAAATTCTTCATCATCCTCAGTTACAATATTATCATCAATGAAGGT
TCGACCATTTGCTGCTTTATAACATTTGAAATGTTTACGATACTCCTTTG
GTACTAATGGTTTCTCGTCACCATAGGTCACATCTAGTACAGATTCACAT
AATGAAGTTTCTCTGACCCTCTTGAAATCAATTTCATACTCTGTGGGAGG
AACATTTCCTCTTCTGTCTAACTGCATGTTAGGGTGATACTTTGCACGTT
CTTCAATTAATAATGAGAGGTTTGAGATGTAGAACACACTTATTAGTTGA
GCTAGTAACCATAAAATAGCCATGAATAAACCAGGTGCTGTTCCATTGTC
TATGGTCCATTTTCCCATAGTGAAATCAACCTTTACTAAAAAGAAGTTCA
GAGCTGGCCCAAAAGTAAGACCTAAAACTCTACCCAGTTCCAGCAGAGCC
AGCGCCCCTGTGCGACTTGATAAAGGATATGTATGAACAATTTCTGAAGT
TGCACAAGCATAAAATCCATCGCCAAGTCCAGCAAAGAAACGACCAGCAA
AGATGAgccattttgaaaatggtaaggCATAGATGATATTACCTACTATT
TCAAAGGTATTCAAAACGATGATTAATTCTTTTGAGCGTTttgttttgtc
aaaaattcgaCCAACAACAGGTAAAGACAACACAGCTGAAGTAGGGTATA
TTGCAACCACAATACCCAAAAACCATGTTTTGACGTCAGGGTATCTCTTC
AAATAAAGCCAAATTGAAGGTAATATGATCGCATATTCAGCTCCCAATAA
GAACATACGAATGAAGAAACATATCAGTGTTGCTTTTCGTTTCCGCAAAA
AAACTGGATCTTTTTCCAGGCCTTCAAAACGGTCATCAAAGTTTATTGGG
TTTTTATCtggcatttttttgcatttttattcATTACACTATTACAAACA
TGatcatttttataagcaagttaTTTCTGTTAATAATACAGGTCAAATCA
GGATCTAGATACTAAAACTTGGGGTATATTAGTAATCTgagaattttcat
ctttagtagTAGAAGGCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017490TCONS_00017490Clytia hemisphaericatranscript
TCONS_00017491TCONS_00017491Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000269supercontigsc0000269:115084..119452 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.24	4.23	63.89	73.83	11.11	6.87	6.85	7.73	7.26	6.88	0.95	3.55	3.92	2.8	2.29	3.36	2.67	2.08	2.12	2.03	3.29	2.31	5.89	6.42	0.75	1.71	3.46	2.57	7	10.77