XLOC_010219 (gene) - C. hemisphaerica

Overview
NameXLOC_010219
Unique NameXLOC_010219
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000291:62939..73901+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010219 ID=XLOC_010219|Name=XLOC_010219|organism=Clytia hemisphaerica|type=gene|length=10963bp|location=Sequence derived from alignment at sc0000291:62939..73901+ (Clytia hemisphaerica)
ACTTGACAAACACTTGCAAAAAATTCCCGATGAACCCCAAATCCGTGGTT ATACAGGGTGCAGGAGAGTTGACTCAAACTcaattttagacatgaaatcT CCCTGCTGATCCATTTCTTCCTTCAGGAATTATGGATTGAATGAAGAGTG TGGTGTGGATCAAAAGATTCTTGCCAGAGCGGTACGCTCAAACACATCCA AAAAGTATCCAAAAGTAAGTAGGTCCACGAAACAAAAGCAgaactcaacc aaattttgctagaagggagaaaaaaacgTGCTGAGTCGAACTATGAAGTT CAAAACTTGCGCAAAATGATGAGAAGgccaaaaattaacaaagaaagAAT AGTCTCCTAAttaagagaaagaaatctcctacttaaaagagaccttctct taaatagagtatatctcttatttagggcataatcctCGACTGTATTTAAc ttttaccgtcaactgctccaacttgagacgagtgtacgcaacatgggact tgttgatatatggcctgtattttcacttttaaagttaaatctctttgaca acaaatttgttttgataactccaccaagtttatcaatcatactttctgtc ataacatgtcacgatatattaactttcactgatagcccAGGCTAGAAAGG GTGCATAGTACGCCGAATATAGTCGGAGTGAGGCAGTAATTACTTTAGGC ATATTGGCGTAAGGAGCAAATATAAAGTAAGATATTGGTCTTAGTCAAAG CATTTCAAGGCGAGAGAACAACCCCCCATTTTAACGCATGATTTCATGAC GCCTGGTTTAAGCCTCTCCTCCCTCGACCACCATAATAAGGAGTGTAAAT GAGATATATATataaagcttattttgagcaacttttaggggtgagaaaat caaatatcCCAGGGCCAAGCCATGGATCCGTTTAGGGGAGCTTACAGCAC cccagcccccccccctgcaATTTCGCTGTTCCGCAAGCAGAACTTTTTTT GGCGTAGACCTCAGTTttaattaacaaataacgaTTCGGTGTGGACTTTG CATCATTTCCACACTggctgatagcgcgccctttttaacttttgttttta tttaaaatgattggacgccgaatggagaattagagaacgcccaccgccta accgcctaccgcccggtgagattaacaaatagcgagtgtgtaacttgccg cgcgagtgacatCAAACGCTCACATTCGCGAGTGTTCCActacgaatttt tttcatattttgatttaaaagtctactcggtgtgaaagagaaatcgtgta tttttttaatatatacGCGGTTcatttaactcaaatcaaatgactttgga gattCGGTGAAATGGCGGTGGAATGGCTGTCCCATGGTgtgtaagatagt cccaagttggagcagttgacggtagttttcattcaaaatgactggacgcT GATAGGAGAATTAGAGcgagaacgcccgccgcctatcgcccaatgggatt aacaaataagaGTGTGTATTTATATACTGCGCTCCATCTTTTGCCACTAA TATAATGGTCTTCTTCGTTCTAGACATTCCCATgcatgtgttccactaca gatttttttcatattttgatttaaaggcCTACTTGGccagtgcgaaagag aaatcgtgtattttttaatatgtcgttcattaactcaaatcaaatgactt tggaggttcggtgaaatggggACCCAATTTCCAGCCcgtgttttgtcaga tagtcccaagttaaagcagttgactgTAGTTACCAGATGTACAGTAAATA AACCAGaaaccgtaagttggtctaatgtcgatcgacatccctcttctaac tttgacacccttctttagagataggaataattggAAGAACGGAATTGCTG ATGTAAACTATTTCTCTCTGCTTAGTgatcagagaggaaaaaatccTTTG TCTAGAAGTGATCCTggccttcctattattcctatttCTAGAGaggggtg tcggaattagaagagtgatgtcaatattagaccaaTTTACGGTAGTTTGA CGGAATTAGACAAATGTAGGGTGCGGTACACAGGTGCCAACTCTCATTTC TACAATTTCTTGGAAAAGATTTCCTGATTTCCAATAtcagaaaatcggaa aaaacaCCAGACAAACACCAGAAAGTTTTGTCCAATGTAATTTGATAATT AAATTTTGATACTGGAACCTGACAAAAACACTGGACTTTCCCGATGCATC GACAGGGTTGGGTCATGACTCATGTCAGTCCCGCAGGCCTGGCAATCCAG GTATTTTTGCTGGGACAAAGatcagtttttttaagtttgcaaaaaacGCT ACGTATAGAAGAACTTTCGAATTcggtatgtgaatagagcagtaactttt gtatttttcctttttttttgcaaaagttccagaaatgaaaataaagggat aatgatgattgaatactatccactgcaGTCCATTGCTATAATCGATTACC ATATACTACTCTTCACTGGAGTAAATTATTGATAGGTTTTTCTTCTGTGA GGGTGTTCGGAATATGTTCTGCGATGATGGCTTTTTTCAACTGGGCCAAA TCCTTGAACCGTGGGtgttatttttaacattttcaaaatggtagaattTA GATGCAGTAGATCATTTCGATAGTTGTtgatggaatgtttacaaggttat taacagaaaatcctttatttGATTATCATATTTTGATAACAGTGACTGTT AGTGATTTTTTGTGAGTGCACTTCATAGTGAcattttgattcccattgaa aactgaatgttaTTCTGGCATACTACTGGATACTCTTTTAGAACTTTAGA GCTATGATGCTGACAGGAACAAAAAAACTGTGCttgtacacactttttta taagaaaaactttataagaatatttatgatgaaattggccaaaaaattaa gaatatggtaagaatatcacgaTCATGGAACTTACTTACTTAGCATCTGA ACCTTTAGAGTGCcattttaaagcattttcaCTTATAGATTGCCAATAAT ACCCCAGTAACACTCAATACTTTCATAAAAATGTCATTCTATGCTTATGT CACGCTTCCAGCGTGTAAAtataggttaaattttgatcTTAACCTAAGCA TATATTAGGATGATTTCCGCCAAAAAGGTAAGAATATccataatgaaata aaaaaaacaaatcaaagctTTTACTAAAAGTAAATTCCGCGTATTGCGAT CTTGCCAAAGGACTAAATAagcaccattcttataaaaaaatgtgtatttg gtatgaaaatatgaaaaacatatGTAAGTTTGTCTCCAAGACTTTTTTCT AGTTGAGGATGTCATTCtgacaaattaaaaataagAGAGCTAAACAAAAT TACTTCAAAAgacgaaatttaattttttatttagttttagcTCTTTGAAT agaaaaatgtcaaacaaaACATGAAAGATGTCTGAAATAGATGAAATTGA TGCTGTTCAAGAGAGTAACAGTATTAAAATCAATGAAGATGAAACAGCGT CAACCGTCATCAGAGCTGAAATATCAAAACACTCAAACACAGATCAAAAT AATGAAGAACAAGTTGATGGTCCAAGtaccagtgaaaatgaaaatgagtc TCGTTTAAGTACAGATGAAATTCCCAAGCAATCTCCTGTTGAGAATGTAA ATGATCAAACAAATGATGAGTTTGCTGAAGAAAATCTCCCGGAAAATTTA GCAGAAAAGGAAGGTGGTATTGATACTGTGAATACCCAATCAACAGAAAC TAGGACAGGTAATTCTGAAAACTTATTTTCTATTATGATTGAGTTTTATA GTTCCCTGTTCAAAAATGCAACAATAGCATATCTTTATGATCATATTGAG TGATCTAATTGTGATCATTTGCTGGAGATCTGCAGTTAATCTGAATTATG AAAATGATTAtcatttatttgtatttttatttttttaaaggtgaCTCTCC AATTGAATACAAAGAAAATGAAGTTACAAGTCCCATTAATGAAGCAAAAT CCAAATTATTGAAAGTTGTTGTTTCTGACGGTAATTAATAATCAATATGG TTTTTCAATTCTGGAGTAAGGTGCTACTTCAAACTGCTTCTTTTGCAAAC GATTAACAGTGCATCTTcaagttctttatttctttttacattcAGATGAC ATTACAAAGACCATTAATGTGAGGATCATTGATAAATGTCCAAGGAAACC ATTCTTGGGAGGTTTCCGTCACAAACTGACTGGTGTTGAATATCTAAATG CATCTGCTCAAACCTTCCCAAAGAAAGTTTTAGCATCTACGGTAATTGAC CTTTAAAACATCATATCATacttaaaatattttagaactccaaagagaaa aaaatacaaaaacgtgCTTCCTACTTTTATAAATCAAGGAATTATACTGC AAAGAAAATAccatttaaattttaatttcatgttttgataaaacatgcat ctaaaagtttttcattaTATAATTGTTTTCTACAATATATATCATAATTT TCATGTTCATATACAGGTTGAAAAATTCAATCGAGATACACAAACAGTCA CCACAAAGAATTACGGACAGCAAACATTCAATGAAACATCTACACAAATG gtatttgttcttttaaagttttaccttttttaaaatttaaatgattaaaa atggaaaaattgaaagtttttgcttgattgtgAATTAATTAAATAGCCTA CTACTGATACAAAACCCCAACTCCATGATAATCatttaaaatgttgtttt tctgaaattatataaaaatcCAGGGTTTCTCCTTAGCAAAAGTAAACTCC TCGGtatcttttttttacagaaataatgaaaatttgagTTGACTGACTAT TAAATTGATTGATTGTTTACCTTTTTTCAGACGAAACCAGGGTGTTACAT ATCTGACGTCAAAGATGTGGTCAAAGTACCAGGACCATATGTAACTgccg aagaaaaagaaaaaatgagacTTGAAAAGGTATCCTTTTGTTTTTTGATC CAAGgctttaatttgttttttcatttaagaggctccccccagcggcaccc ctaatcacgccatcacgcaaaaaaaatttctccatcacgtatcacgaaaa tcgctagactttgtcatcacgcaaaaaatagcgaaaaatagcccaaatca catattacgcctcaaatttttgccctatcacgcatcacgccaaaatcttg atcacgccatcacgccaaaaaaaactctaattgcgccatcacgcaagaaa aaagtcccaatcacgccatcacgcaaactgCTGGGGGGCCTCATTTATTA AGTAAAACTTCACATCTGCTTTAGATcggtttatttttcattttcaaaca tTGCTTTGGACAACGTTTATAAACTCTTTCCACTCCGTTTATATTATCAG ATTATCATTTTACAAAGTTATTGGCGAAGATGGCTATCTACTAACTTTGT CAAGAAGTTGAAAAGAGATAAACAAGATCGACTGGACTGGGAACATAAGG TAAATTATATTACTTGTTATTTAGATTTTCCCTCCcgtgagataaaaatt ttctcactGTAGTGACTTGTTACTTTATTATTTCACCTTTCCCCCTCTAA ATAATCCCATTTTTTAGACAGCTATGAATTTACTTGATCGTCAGATTTCT TCAAAACCAATACTTTCCCAAAGTTTGAGATTGTGGGATAATTTTACgct gagtatgaaattcttcCCTTTTCGCTTTTTATTCCAGCAAGCAGAACAAA GAGCTGCAGAACGTGCAGAGAGATTGCGCCGTGAATTTGAACGACGTATG AAACCACGCACCAAAGCCGACTTTGATTTATTGTATTCTGCTTTGGAAAG TAAGTgtttaactttaatttttttccactAAACACAAAAACTTTCTACAG GAGTCGATGGATTTACGTCACTGTTGACAACAGTTTCTTTTTTACAGATT TCGCTTATCATGGCAGTAGTACCTAGCTCACCAAAACCAAGCCAAACCAT TTCTTTGATCACTATATCACAGAAAATCCCCGGTCGGGTTAAACTACCCT TGTACGTAAACCTAGAAATATTTCGGTTTTATTCGCCAATCTCTGAAAAC GAGGGGTGAGTCACGAAGCCTCCCGCTGCAAAACCCTTGACGCGATCTTG CAAAAATAACCTTccaaatgttaaaaattttcccaactttcagagcttta gcgtgtcgaaTGAAAATTTCTGTATCTGGGTGACAGATATAATATATTTC TTCATAGAATGGAGACAGGAAGAGATTGAGAGAATCAACACAAACCACTC AGGACCTGAACGAAAGGCTGCTCTTGTAGGTCTACTGGAACAAGAAACAT ACTTGATACAGTCTATAGAACGACATCGCATAAATGCCGATAGAAATAAC GAGGAAGCACATATCTTGCGGACCTTAGAAAAGGTAGGTGCAAATCATAA TATCCTAATACGTTGCTCTTGTTTCGATGCAAAATACTCATAGACACGAT CATTTAAGCAAGAACGGTattcaaaataactttttttattgaattttttt cccccATATTTATATTTCACCACGGTTGAGAGGGGGGAATCGGACTTAAC CATATCGTCAGCAAGAATTCTCTTCTATATCGTACTATGggcgaaatttg atttttgtgtACTAACCTTACTTCGTAGTTTTTCTCCTGcaaagaagagt ttggtacaggctacgCAGAGAATAACGTATTTTTCTATTGTAAGACCGTG AATATCTTGATCTATTCAAAGTTAGCCATGATTGGGTGACTGGAAAAAGA AGAGTTGGGTGACTGAATGGTCTATAGCGTCAAAACCTAAATACATAAAT AAATATTTCCGTTCATAGTTAGCCGAGCAAGGTGAAATACTGTCTAAAAG TATTAGATTACTTGGTAATTCAACTAAAATATCGATTGACTGTGCTAGGC AACTTGAACAAactcttttttatttcaggCTGGATCGGCGAAATTCTGGA GAGCTTATGACGGTCAAGTAACACAAATGAGTACTCAGCATACAATTCGC GCAAAAGAACTCAAAGATTTGTATGGTAGTTTGCAAATGGATTATTTGAC GACTGACGAACGACTTGATGTATTGTTGTCGGTAAAACAGACTGTAGCCG taagttcttttaaaaatatccGAATTTACCAAATTGACAAAATTAGCGTC CCTTGTATGATGACTTGTATGACTGCAGAATCTCCGCTCAAAATTAATGA CGGTAGTCATGAAAAATGTTATGatattataaataaaataatttatatct cATTATAACGCCCGGTTATGTTATGTTCTTTGTGTGctcttttttgaata ttttcttttttcttttatcgtTCATTATACTACAGAAAATTATAATTTGA TTATTATACTTCAATAgagtttctttaactcgaacctcttaaCTCGAATG ACTCCTTAACTCAAAGAActtttataaaccttactctataaCCCGGAATT TTCTTATCTGGAACAAATTTGTACTCCGTGTTCGTGTTACAGAGAATCTA CTGTATTAATTAACAGTTTACAATTTGCATTTTTTAGGAACACGATTGTA AATTGACTCAAGAACTGATCAGTTTGATTGACAGGGAAGCTGACCTGCTG GgtagaaaagtcaaaaactcaAATCTTGATGGTATGCTGTCTTCATTGCG ATTTtagattgatattttttatattgcAACAGCCTTACTTCTGAATCATT CCTAGACCTTTTCTCAGTGTTTGTGATTGGATTTATATGATCAGGAGTCT TATTTAGGCCCTGCGAACGGTGAAAAATTATGATTCACCGTCTTAACTAT ATATTGCATTGACGCTAATCAAATAACACTGGGCTTGCTAAGAACTCGCC GGTCGAGAATTTAGAAAtcgagttaatttttcattcgtcAGCCTATCAAA AACAATGCAGAACCTCTAGTGAAGGATTACGATATGACTGAATCCATTTT TATGTCACTCTAATAATAATGTGTCATTAAAATAtaatataccttaaggg aagaaattttcgcggaatttaatttcacgaatttgggcgtaattcgcgaa attaaattccgcgaaacacaccaaaatggctgaaccgcgaaatcaaattc cgcgaaacacgaatattctcacaattaaaaaaatcacccctaaaattggt cttttaagggcaaaatagggcttttcgtagacaaataattccctcaaccg cgaaattaaattccgcgaaatttgccattttgaaactctgattcgcgaaa ttaaattccgcgaaaatttcttctcgcgagaATTTCTACCCTTTTAATGT AATGCAAaaggaattaattttttttcaggattaCGACAGCGAATCAACAC ACTTTTCATTCAATACTGCAAAACACCAATGTTCAACCCTGAGATTGCAA GACTCTTGAAGGTATAGTtactttttttagaattttaagaagtcttttca ttaattattttgagtgcagcgactgcctcgttttgaaatcattATCCAGG AAATTATATCCCTTGAGTTTGAGACTTTAAAGTGTTACTTTTTAAATAGA GTGaacttcttatgaactcctCTGGAAATCAATTACCAggacaatatttt gaaaacgaggttaTCGTTGACGTATTGTAATTTGCCCCTCTGCAAAATAA TTTTACGAATGCTTAGTTTTCAGGTGGTATATTTTATACAACTTCGATTT GAATATTAATGAGACAATGGCTTGCAtttgtttggaacaatagaaaattg taAGCATAATACTTACTCTCAGTAAACCAAGTTCTTTTAATATTGCAGGT GCCACAAGATGTCAACAAACTTCgaaaagacatttacttttgtCCAAGTT GTAATAAATATCTACCAGCCACCGAATTTCCTTTAGCATCAAACTCCAAG TAAGAAGATTGATATTCgagactttttttaattttttttctaagccCTTA GAAAAAGCTTTCCTTGAGATCCGTATATATACCTATAAAATGTAACCATT CTCCCTGCCCTTCATCCTCTCCCTTCAACTCCAGCGAACGGACAGCATAG TAAATAATTTAAACCTACTAAAGAGTTTTTGATAGAGTTGTGTATCATgc ttatttgaaaaataattttcaataatttcatcattttcataGAATCACCG GCCGTTGCAAGAAATGTTGCGCGCTAGACAACAACTCACGTTTAAGGCAC GACTTCACCAAAATACGCttcattttacaaaatttacgcCAAACAGAAGA AGCATTTAATGATAACTCCAAAATCGCGTTCATTATTCAAGACGCTGATC TGCGGTACTTGATCGAAAATATTTGGAATTCACAAAGCGCTTTGAGCGGC GTTGAAGATCTTTATGAGTTGGTCTTGATTCGTTGGAACCGACACGAACC CTGGTCGCCCTGGAATTGCGTACTTTTCACCAAAGATGAAGCTAGTGCTC ATATGAAACTTGAAAATGTCTCTGAggtaatgattttatttttcactttt tttggaaaGGAGGATAATGTTAGACATAGCTTTTCTCATATTTAGTCAGA TCTATAGAATCTTCCTTTTACCAGACTTACCTAACTTTACTAACTGTGAC CAGATCTAAATGGAGTGAACAAAGCAGTTGTTTGGTTCGAgccaaaatga agacattgcaatatcCATAATAACACACTAGGTCTCACTTTAAAGCTTGT CACGGTTTAAATCTTATAATTTTTGTGCGCCCGCTGTGATAATCGGGATA TATAATGTTATCTTTTGTTATGTAAATGGAACAATAAGTTAGCTGCCGAA AAATGCAGATGACTGAACGGTCTGAAAAGATTGCAATAGTCAGATGAAAA ACCACTACGCTTATTATTTCTTTGGTAAAAGGACTTTCCGGTggatacaa atttatttttggacctaccccggtggaggtcctataaattaacctctgtt cgtccgtccattcgttcgttaccaacttttctcgagattggctcattagt tttttctgattttttgcacaaagatgtgtaactatttttgaaaaaaaaat tttggggtaaatttcagctaaaaaacgatcaaaaaaagattttttttgtg aaatattggatcgtttTTTTGcgtgaaagtaggtaaaagattgctcaagc agatttttgtaaaaaaaaatttttcagctcaaaaaacgcatctttatcta taagaatcactattaataagtaTACATTAATGTACTTAGccaaattaatc aattttttgacgagatggatgtttttttgctcacgaagtcttgaatataa aagaatatttcaagagcatgaattttgggttctaaatttttttttataag aaacaaacgactaattttaatagatcgtcaataTTTGTgctctgaatgat tgtttcatggtcacgtcacgtagatatcaattataaatatgttaaatgca caaccaggtaggtccataaaggTTTCACTTGTTAGATTAGAGAATTACTA AATTAAACTTCTTTCATCTTTTTCCAGGCTTACGGTCGCATCTTTATTGG AAAAGTACGTAACAAGCATTTGCTAGCGAAACAGCATTTCGCAAAACTGG CTAACATCGAATCTAAAAGCCAAAGATCAAAGAGTAAAAGCCCTGTAAAA GATCCGCTATTTAACAGACTGGCTGGTACTGTTAGTGGATAGATATTAAa gttttcaaacttcttttttcgaaaattgaatgtttaattttgtatttgta CCTTGTTGTAAATATTGTCAATGTTTTTAAGTCTATAAATTAACATCAAT TTTAACTCTCTCACGATTATATCTAAGTCGTATATATCAGAATAAAAATT AAGTCCATGAACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018189TCONS_00018189Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018189-proteinTCONS_00018189-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000291supercontigsc0000291:62939..73901 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
IQUBPREDICTED: IQ and ubiquitin-like domain-containing protein isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
27.01 24.75 62.34 69.01 239.46 178.46 82.89 90.77 60.14 66.46 51.7 58.26 20.79 20.32 12.91 16.31 19.17 19.12 33.32 40.97 22.51 21.89 23.06 22.66 138.74 105.87 21.96 19.89 13.57 14.08