XLOC_010724 (gene) - C. hemisphaerica

Overview
NameXLOC_010724
Unique NameXLOC_010724
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000319:269881..276214-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010724 ID=XLOC_010724|Name=XLOC_010724|organism=Clytia hemisphaerica|type=gene|length=6334bp|location=Sequence derived from alignment at sc0000319:269881..276214- (Clytia hemisphaerica)
TTCCAGATGAATAATAGAAAACAATAAGATTTAGAAAGATACAAAATTAA
AGATGGCGTCAAAAGTATTGACAGGGAGTGGAATGCAATGGTACCAGACA
GTTATAACATGTCCAGCTAAAGCAAGGGGAATTCACAAAATTACAGATTT
CATCGTTCAAAGTAAGTTATTCTACATCTAAAATTGTGAATTTTGACCCC
TCCGACAACGGATCTCACTGCCCGGACATGCATCAGATGACCCCCCCCCG
GACGTTCAAAATTACCCCTAACCAGAGCAAGTTTGCCCCTAAAACAAAGC
AAATTTTGCAGATTTTTCACTACCCTTCTGGACAAAATATCCAATATATC
CTCCACCCCCCCCCCCATGTACAACAGTTTTCTGGAAGAGCCCAATGCAA
CGATTTTAAAGACTTTTGTCATCTTTTCAGAGCTACCATTTTTGAAGAAG
ATTAAAGTTGGTACCATGAATATCGTCATCCAACACACATCAGCAAGTAT
TTCTTTGAACGAATGTTGGGATTCTTCAGTTCGCACCGATATGGAGATGA
TGTTAAACAGAATCGCTCCTGAAAATGCACCGTATATCCATACACTGGAA
GGTCCTGATGACATGCCTGCTCATGTGAAGTGTAGTTTAATGGGTGCTTC
AATCACAGTACCTATTACTGAAGGTAGACTCAATCTTGGTACATGGCAAG
GAATCTGGTTATGTGAACACAGGGACCATGCAGGTTCAAGGAATCTGGTG
GTAACAGTCCAAGGTTGTGAGTCCTAAGGTGACCTGGTGAAGGTTAAGTA
GTTAAACCAGGTTCAACATTTAAACTAATATGATAGAGAACCAGAAAATA
TCGTTTATGGGACGTACCGGTATTGAAACAAGGAGAGACTTTGTTTCTAT
TGCCAATGATCCTATTGATGAAATTCGTTTTAAGCAATGCATGAAATATT
TTTGTTACCTTTTATAGATTAGTATATTATAGTAAGTATCTTCTATCGCT
TGTAAACTTTGCGGATGATGCAGACATTGAGTTTAAAGCCCGAAGGGCTA
GAGTAGAATCTTTAACCTTTCCCAGTCAAGAAAAAGTGATGTCACTTATT
TCCCATCCAGAACGCGCCTAGAACGCACCGTAATCATGACAACGGATTGT
ATCTAGCGGTTCCTTTGATTTTTGAGGACTGCATTTTCTTAAAATCTAGC
GATAGATTTTAGTTTCAATCCGGCGTTTGTGTAAAAACCACGCGCGGGCG
TTCTGGATGGGAAAAACTCTGGCTTCATTTCTCATTTTCCATCCAGGAGT
CTCGAGTCTAGCCCTTCGAGCTTGCAAGTCAATGGATCAAACTCTGTGGT
CAAAGTCACCGTGGTCCACCAAGTAACTAAAACCGAATAAAGTTCTAGGA
AACAAATTTTGTAAAAAGGCAAAAAGCGTTCCTGTATTTATCATTTTCGC
CTCGATATATTTTGACATATTTTGTCCGGAAGAAAAAAGCGCTAGCCTTT
TAACCATGAAAAATTTTGCCGATAATTACTTCAGAAAGTTTTGCAAGAGC
ATCTGATAGGATAGCTTTAAGGTTTGAAATTTTCCTATCTTAAAATACTA
CACTCTAAACCCGCCTGCAATTAAAAGTCTCGCAGACAATATAAGATTTT
TTCTTTTATTCAATTTCATGTAATTAGTAACCCATTACGTTTTTTATAAT
GCCAAAGGGTCATGATGATTAATTAAGAGAATCGATATGTATTTTGTAAG
TTTGATGTTTTGAGATTAAGATCAAATCATTTTTATAATAATTCTTATCG
TGGGTGCATGCAAAGATTTATATCTTTCTTTCTTTTTTTGGTATGTGTAA
ATATCTTCCACTTGACTTTGCTTGAGATGTCTAAAGCATCTTATCTGAAA
CATGACAAGAATTTGTCCTTAAAGTGGGTCGATGTTCTGGTCTGGAATTT
TACTATTTGTTTTCTTAAGGTTTTAAATATAGATAAATATACTTTTCTAC
ACACTGTGCAATGATACAATGATGTACTGCGGTTTTTTTCTCATTTGCAG
GTATTAGCTTATTCAGCATATTGATGCAATTCCAAGAACTTTATAGTTTG
TATGTAATATATTTTGAACAGATAATGTCATAATATCATAAAAACGTCAG
AGAGGAAATGCAAGAGAAGACATTTTAATGTGACAAGTTGTACGATGCTG
TACGTATGTATATTTCTATTAATTAATATGTGTTTATGTTTTTTTGTCGA
TTGTATCTGGTTTTCAAATTGTATCAATGTAGACAATATTTCAACGATTA
ACTTTCTTTTTATATGATAAGGTTTTTCCTAGTGCTAGTTTTGATACAGC
AAGTATGTACACTTAAAAAAGAATTATTCTAAAAGAGGAACTCTTAGAGA
CTCTTCTAAAAAAATTTCATCTCCACAAGCTTGTCTTTACTTGTTTTGCA
TATCAAGTAAAATAGGTTTGAATGATATAGTTGTTCATTCGTTGACTGTT
GTGTTCGATTGCGCGTGGATGTTTGTGTGTTTCTGACTGTTTAAATATTT
TGTTAAAGAGAATTTATATTTAATATTTATTATTCTACCTTTTAAACTTG
GCTGTTAGATATACAAAATTGCTGGTTGTGTTTTTTTCTGCTAGAATTAT
TTTTTCATGAATTTCAAAGTTCCTCTTTCAGGTCTGTTAGGTTTCATCTG
AAAATAATACTTTTTTTATAAGAACATCCAAATTTTTTCAAGCCTTCAGA
GATGTTTTGTCTTTTTGAGTTATAAGCCTAAAAATGTTCTTAACATGTTC
TTATTTTCGTCATTTTTGAGTATTTATGTCCATTTTCTTAAGAAATCGGG
TGTTTTGAGTCCGTGAAGCCTTTTTCTTAACTTGTTCTTAACATTTTGGC
CATCGAAGCCTTATGTTCTTATATAGTATATTCTTATAAAAAAACGTGTA
GTTAACAGAAAATGTTCTTTCAGCATTGAGCATTTCCAACCAACGAACTA
AACATGAAGATGGAGAAAAAGAGAGATTTCAGTGTCAAGGAATTGTTATC
TTGGGGTGCTGTACATTCTGGCTACTTATCCAAAGTTGAAAAGAAATCAA
GTTTTGCGACCACGAAGAAACGTAAAGATACCATTCCATTTTTTTATCGT
CACTTTTTACTCTCTTAGTAATTTGTTCTAAATGAAAAACCTACCAGCAA
TCTCGCCGGCAAGTTTTTCCTTTTAGGGATCTGAGTAGCATTGGCAGCTG
ATATTGATCCTGTTTTTAATACATGTTTTTTTTATAAGAACATCAAAATT
TTGGAAGTTTTTCGGATGTTCTTAACTTTGAGTTTTATGCCTAAAAATCT
TCTCAATGCTCTTATTTTCACCCATTATCTTGGTATTTTTGTGCGGTTTC
CTGAGACATTTATTTTTTTAGAGTCGGCAAAGCCTTAAAATGTTTTTTAC
TTGTTCTTGATATTTTGGCCATCGAAGCCTTGTGTACTTATAAAAAACGT
GTGTATCAATTTCTAAATACTCAAAATACACGTTTTTTCATAAAACAAAC
TATATCAGAACATAAGGCTTCGATGGCCAAAATATTAACTACAAGTTAAG
AACATTTTTAGGCTTCTAAAAACTCAAAAAGTTAAGAACATCCCAAGGCT
TAAAAAATTTTGGATGTTCTTATAAAAAAAAGTGTAATCTTCCAATATTT
ATTCATCCGTTACAGCCGTTCAAAGATTTTGTGTGATTTTCAATGGTGAA
TTATTCATCTTTGCGGAAAAGACGAGTTCCATACCACTGTGCAATTTCAT
CCTTTCCAATTACTGGTAATACTTTCTTTTTTATTGGTTACGATTTCGGG
CTCTTCCAGAAAATGTTCGTGATTGGTGAAGGATATAGTGTCTGGGGGGT
AGTGAAAAATCTACAAAATTTGCCTTGCCCAGCTTGGTAAACTTACTCTA
TTTGGGGGTAATTTTGCTCTGTTTGGGGGAGGGTAATTTTGAGTATCCAG
GGGGGCAACTAATGCTTCTCCGGGGGGTCAAAAGTCTCAATGTCCAGGGG
GTAAATTTCCAGAAAATGTTATATCCTCTACCCCCCCCCCTATATTCAAA
TTTTTTCTGGATAACCCCTTTTCATTTCAATTCAATTTTAATATTAGTTT
TGCAATTTGTGTATGGACGGAGATTTGAGATACAATTACACGTCTTAGTA
GTACGAGGCTTTTTGGTTAAATGACCCCATTGATCACAAATTGTCCGTCC
ATATTCGCGAAACCTACCTGTAAATTAGATTGTTGTTCTACGTCTACTAT
CCTCGAGGATTTAGCTTTTGCTTTTTTGGCTTGTCTAGCAGTAAAGGATA
TTAAATGTTCTCAAATGAGACCAAAGGTAAATTTCAAGAAGTATGCACTT
GATGTGCAGAGTAACAATTATTTTTCTTTCCACCTTTTCATAATAGTGTT
GAATTGTTTGCAGAGCCAGGGAGAGCACAAACGTTAACGCAGAGTTACTA
CATCAATTTACAATGCGAAAATAACACGACACAGCATCAATTTGTTTGCC
CCACGTATTGGGAGGCTGAGGTATTTAATATAAACATTAAAAACGTAGTT
TTTCCCCCATTTTTCCATTAACCTTTGGGCTGTGTCAGAAAAGCCGGGCT
TAACTTTTGTTTGCTCCACATAGTCGGGAGGGGGTTGAGATATTTGACAT
AAGCATAAGACGTGGCTACACGGGCCTAGCTTGTTACCACTCTATTTGAG
GAATTTCGTACCTTCACTAGATTGGAATATCGAGGACATTATGCACAGTG
TTGAGGATTTTCTCTTAGATCATTAATATAGCTCAGCTCCTTGCACGCAT
TTGGTTTAAATAAGGAAAATTAATAGAAAATAAAACCATCCCATAACATA
TAGACCTTCATAGTGTCCCCCCCCCCCTTTTAAAAGGGGGGGGGGGGGGG
TTTTTTTTTTTAAAAAAAAAAAAAAGGGGGGGCAANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAG
GGGGGGGGACCAACTAGGACACTATGACCTTCTAAAACATGTATAACAAC
CGAATCCAGTCTATGTTTCTAGAAAACTATTCTTTTCTATTTTCACTGTT
TGGTCAAATATTTTCTTATCTTCTCAATCTAGAAATGGTTGAATATAATC
AAGAACGAGATGGCATCTTACTATCCCAATGGAGAGAAAATCAACGGCGA
AAGTTATGATTACGCGCAAACCAAACCTACAGATATCAGTTTCTCGAATC
CGGAAAAATACGACGAAAAAATTACCAATGAACTTTTTACTGGCACCTCA
AACACTTTTGATGATCATGGGATTTTGCCGGATTCAAATAAAAGTTTCAG
AGGACCAACTTGCCGTCTAACGCCTGCAGTCTTCAGGCCTTCATCACCAA
AGCTTTCCAAATCTCCAGAACGATCAACTCCTCTCTCCACTTTTCCCATC
ATTGAAAGTGATCATTACAAAAGTCCAACCGTGAAAGAAGCCTGTGCTTG
CCCCATACCTCCGCCACGCCCGGAACATACTAAGAAGCAAATGCACTCTC
TAGCACAGCATAATGAAGCAGAGCAATCTAAAAAANAAGCAAATGCACTC
TCTAGCACCGCATAATGAAGCAGAGCAATCTAAAAAACAAACGCACTCTC
AGGGACGTCGCTATGAAGTCAGTGAAATAGACGCTGAGGCAGTAGGTAAA
ACTAACTGAAATATTTTGGTACTGAATACACAGATTTCGATGATTTTTTC
CATCCTTCACTTTATATTATTTTTTCAATACATACCACTCTACAGTAAGG
AGTATCTGGCAAATGCCTTGTCAAACGACTTTAAGAAAGAATTGACAAGT
TGCCCATTTCCTAGCTTGTTTGTTTTGTAAGGAGAATTTGTTAGGAATAA
CTTTGTAACGAAATAATGCTCCTTCTCTTGATTTTAGGTAGTCCTTCGAG
ATTACCAAATGGCATCAAAGGTCCACCTACATTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019126TCONS_00019126Clytia hemisphaericatranscript
TCONS_00019125TCONS_00019125Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019125-proteinTCONS_00019125-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000319supercontigsc0000319:269881..276214 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.47	15.02	9.77	7.71	6.89	5.59	7.55	8.61	10.57	9.37	10.79	9	6.68	6.87	14.66	17.89	11.14	10.89	6.77	7.21	7.77	7.75	11.46	10.35	11.04	9.84	12.54	8.38	7.03	7.19