XLOC_010818 (gene) - C. hemisphaerica

Overview
NameXLOC_010818
Unique NameXLOC_010818
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000323:375334..382460+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010818 ID=XLOC_010818|Name=XLOC_010818|organism=Clytia hemisphaerica|type=gene|length=7127bp|location=Sequence derived from alignment at sc0000323:375334..382460+ (Clytia hemisphaerica)
CGGGAAATTCCGCTGTCTAAAAAATCACCAGCTGATATTTATTTGATTTG CCATTGAAATTTCAACAAATTCGAAAATTTCCCCCAAaacatttgatgaa aattacctaggtaataaattgaaatttctaatgcctaatttttccatttt ttgttacaaagtcaaaagaaattcccgaagaaattggagaaaaattcCTC TATCTTCAATCTATGATTCCACCCCAGCCTCCTTGGTCCGCATTTTGCAC GTGTTGAGCAATAAGATTCGCAGGGCCGTGACGATCTCCTCTTGCCATCT GCATTTCGGTTGGAGCTGATTTCGCTTAGACTTTTCTATTAAAAATGTCA ACTGGTACAACAGTTGCAGCACCTGATGCACCtacaaataagaaaatata tgtTGGTAAGTTTGTTCTTCTAAAgtatgatgatttttgatattttttat aacatAAATTGTGGCTTACTCATTAGCATATGTAACCAGCAAATTGTAAC TATTAACTGCCCATTTATGGATCTGCACGTGTTAAATCAGATCATGTTAT GACTTAGCAGGTTTTACTTCAAAAGCTGAAGCTCAACCACTTTTTTCCTT TAACAATTTTGATAcaccatcattcaaatcagaaagtgAAGATAGTATAC TACATGCTCTGATGAGCAGGTTTTGGCCTACTTGAAGTTAAAAATTTCAC ATTGTCGATTGGTTTAGATCTACTAACCTGCAAATTGAACTAGTCAAGTT AAGACCATACTGTATTTTATCATGTGCCAAAAAGTATTAAATtaaaccag acggtgtcaatcgaacgaatcgaacgccgaatcaattgatcACAGTCGAA TAATTGCGNcaaattaaatttttttctttttatggccaatttttcacaat ttaccaCTGATATCAATGTTTTCAGCCTGATTTCAGATTTAAAAATCTGG CATCCGCCAAATcaaattctcgccaaaataagctTTTTCCAtgatccacc aaattaaattctcgccaaaataagctTTTTCGGCCATCTGCCAAAtgaaa ttcctgccaaaatttcttcctgtaCAATACCATAGTGTCCTCAACCCATT TAAAAAGGGGATTCTGATTTGGCCCCATTTTTTAAGGTatggggaaaatg aaaaatttaaataataaagAGGATGAAAACCAGAAATTTTGATTGGGGGA ATTTCACTGATCTCAAGGCGATCTCGTAGAAGacctgtttaagcaataaa atcagcaaaccTTACTtgaaccaaactaatttttcaacaaaacttCATTT TTCAAGCAGTTTCAAGGCTatcattttcaagatttctaaaactttaaact tgataaggcatttttatgttaaaatAATGTTAAATTTATGTTAACCAAAC AGGGGAACTGCAAAATTGTCATATAACCAGGCGATGCCAATTGAACTGTT CGATTACCAAACCAAATCAAACAGTCATTGAACCGAGATTTTCTGGTTTG ATTACTGCTCGATCAGGTTCGGTATTTCATGCGAAGAAATTCTGGTTCGA TTACAAAAATTGATTCGATGGAAATAAttgggggaaagcaaaaaaagaGG GGTGGaccaaataaaattttaatatgGCGGGGATAAAAAAGAGGGGCACT GTCTGACTTTCTTTCTTTtggtgaaaaatcttaaaattcaataaaaccTC TAAAAAGTTTTCGCTTTCGCCGGCCGTCGTACAGCTTTACCGAAAAATTT GTCACTTTTCAACTTCCAGATGAGGAAAAATCTTCCCAAATGGGCAGAAA AAATCTGAGTAAATTCTTCCCATCTAGGAAGTTTTCCCAATTCGGAAGAA TCTTACCGATCAGGTTAATGTAGACTGTTAGAGCTGTAGCATCAACGGCT GCCAATACCCCAATTGGAAAATTGGATATGAGCAGGCGCATTTTAGTACT GCATGAGACAGGAGTGATTAATGAGAGCAAATGCAACTGAAGCCATCGAA CAGCAATTCCTGGGTGATATCGATTAcgatttgattgcgttcaacaatca aatgacaatttctttgattgcgttcaatttACACTGGCAGAATTAACTGA ACCCTTTTGTGCAATTGTGCGATTTTGAACTCTTTCAAAGTCTGGAACAT GACCTGAACTTGTCAGCACATGTTTTGTGGGGGGTGTTCAGGTCAGGTTT TTGGAGGCAAAATCCAAAATCTTGTAGCTGAAACTTTGCTTGAATATTGT TCTTTTAATGAACCTTTGCAAGGCATATTTTATATCAcaattttcatcag aatttcatgcCCTTTTCCCTGGGACCagcagattttgaatattttcgaaG AATTAAAAGTTTTGGTTTGATTGAAAGGTCGACAATATTTCAGGAATGGT CACGCATGTGCAGTAAGTATGCAATGCGTAAGTAAAAACAAGTGCAAGAT AATAAATCTTTTTCACACAAAAGAATGTTTCCATGCATATATAGTAAAAT TGAAGGTTTTTCTGTATTTTGTatcaaaaaattatattgtaaattcgttt gaaatcaactttgctattttttgtttgtttacaaaaacaatagaatgaga ggtcacatctcgaaacaactttcaatttttcattttgctttGAGATTATT GTTGTTTAAAGAAGTAGCTTTTATCTATCTGACTAAGCACTGAGGTGTCG CCCTTTCTGGTGCTTCCTTTCCTCcaaataccgggtgacccagaAAAAGT ATAAGGGTTTGGAGATTAACTGTGTCTGAAATAATTTGAACTTTTACGTA ATTCTTTTCACATTGTAAAGATGAAAGGCATACTTAAACTTTGTATAACT TTTTTAGATTTAGTTAGTGGTTCTCAAGTTttaagcttttgaagtcaaaa ttccctttgaaaaatgtcaaaaatcatcaaaaaatttggTATCAAATTTA ATTATAATGCTAAGCAAACCTGAGAAATATTTCTCCCACCGGGCCAGTCT GGAAATAGTGCACAATACTTAAATCTATTGATAAAattgttttgcttaaa atttctgTTATGATTTAATCTTATTAAGCTGGGTGTCCACTGAAAAAAAG TAAGTTAGTCTCAAATACCTATTGACAACAAATAAATCCAGACATATGTC Tggaattaaaaaatcttttgttctttttaaatacaaagtaaaaaataaac agtatagaataaaatgttttcattttttcatcacTTATTTTTTTCGCCCT ATcgcaaataaaacaaaaagtatttAATTGTctggaattatttttttgcg aCAAACAAATTTGcgacaaacttattttttccagTGGACACACAGCTTTA AAAAGCAAATTCCCGGtaggggtcactagtggccgcccatagcagtgcct atagaccaagagtgaGGCCTAAAAGCCATATTTAATCAGTGTGATAAACA ATGCTGAAGGCGTCTGGAAAGGATGGCTTTGTTCATTTGCAAGGGCTCAG TAGAGGGCTCTCTAGTAAAGGTCTTATGTAAATCCTATGGAGGTTTGCTG GAGAAAAACCTGTCCTACCTAGGGATTGGTTAGGGATAAATCTAGATTTC CAGGTCAAGAAATGTTTTGATAGCCTAGCAAGTCAAAAAGGTTTTCATGT TCATGTCTGAGACCAGCTGAGACAAATAACTTTGCTGTGATGTTTTTTCC ATTATCATCCATCTTAATTATTGAATTCTTTATTTTGTGTTTAGGAAATC TTGGAACCAATGTAACCAGAGATGACTTAGTAAATTTGTTTGGACTTGCA GCCACTCCATACTTGAAAACCTCATGTACAATTGAAATTGCTACTTGTGA AAAAACTGGAAAATCAAAGAACTTTGCTTTTGTTAATGTTCCTGAACATG TCCATAGTGAACTTATGAAATTGAATGGTATTGAATTTTATGGACGACAA TTGGTTATCGAAGAAGCCAAAACAAAAGATGAtgagaaaaatgatgaaaa caaagaaaacagaaatAAACAGCGACCTTACAACAACAACAGACGTGGAC GTGGTGGTTATAATAGAAACAATGGTAGAGGTGGTAACAGATATGACCAA CGAAAAAAATACACTGTTCCAGCCATAGAAGCAGATCAAGTTTTTTCTTT GGTTGATGGCGGATGCAATTTAACAAATCCAAGGTTTCCTCAAATTTAAA TCTAAGATTTCCTCATTTAAAGAAACTGAACTGACAAGCTTGTGTAGTGC TAGAGTTCCAGAGACAAATTTTAAGAGCTGCCGTATTACTTTGACAAAGT TTGCCTGCAAATGTTTAACTTTGAGATGTAgaaataggtcaaaatcagtt aaaaTACTATAATAGTACGTTTGCTACTGTTTGGTATCATATATATCATA CTTCCTTTTagctacttgtttcaaataaactcCCCTCTATAGGAGGGGTT ATTCAAAGGGGCATTTATGGAaaaatttttcctcaaaaaatgtGTTTATT TATAAAGTAACGGTAATGTTCTAACAAACCAAAATTGTTGTAAGCAAAAT AGACCAGAATAGACATGAAACTTCTCAATTTTATTAAAATGCTGGAACAG CTGATGATACTGAAATCTTGGAATACTGATCTTAGAAGCGAAGGACATTC TACTATTCGTCTGAGCAATAGCTATAAAGTCTATCTATCATTTTAGATTC AACCAGTTCATTGACTACGTTATTGCCCGTGCATTGAAAGGTGGTATTCA AAAAATGGTTGTCACAGGACTTAAAATGAATGGATGTAAATCAGCAGTTG TCATGTCTAAAACAAGACCAAATATTTTGTATGCAGCTGTAGGCATTCAT CCACATTTTGTAAAGGATGACTGGACGGATAAATCACTTAATCAAATCGA GGAGCTAGTGAAAGATCCTTGTGTTGTTGCCATTGGTGAATGTGGTTTGG ATTTCAATAAAGACTATTCCCCAAGAGAATTACAAGAAACTGCCTTCAAG GAACAGGTAACCTTTACATGCTGAATTGCGTAAAGCTATATGAGAAGTTT GAGATTCAATTGGCTTGAGAGTGTCTTGAAAATAGCTTCTCGTCAAGCTA CATTCACACATTGAAAATTGAagagtttgaatttttcttaatttttgttt cACAGATCAATTTGGCTGTTCGCTACAAGAAAACTTTACTTGTTCATGAC CGTGACGCTCATCAAAGTATTTTGGATATTCTTGAACCTTTCACTGATGC CCTTCCACCAGTTATTATTCATTGCTTCACTGGAACTAAAGATCAAATTA AAGCTTATATCGACCGTGGATATTATATTGGAGTAACTGGCTATCTTTGT AAAGGTATGATCTTGCTTTGAACCAGATTCTTTTCTTTGGATTTCATCCT ATTTTTCTGATTCTTTTCACATCTAGGTATTAATCTATTTCTTTCCCGAG GAATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatttttttgtacattaggag taatgttcaagctctatcaatacttttacctaaataattcaaagaaataa aattatgacggaatattgtcggattttttataccaatgttgaaatacagg cggcaacgaagctcgcttcaaagagacaataaaagatagatgtccagtcg tttatatgttcatgctatAACCAAACAGTTAAAGTTAACCTGCAGTCCCG TTTTTCGCTGTCCACTcttctcatttttttcaatttcagaaaaatatggc GGCAGTCTTCGTGAAGCAATCAAAGACGGTACTCTTCCATTAGACAAAAT TATCGTTCAAACAAATTCTCCTTACATGACACCATCTGTACCACAAGCAG AAATTGATCCAATCAGTCAAACATTACTCAATTCGTGTTGTGCAGATAAC GAACCGTGCACGTTGTCAGTCATCGTCCGTTACATTGCAAGGCTTATTTC ACAAGAGCCGAGTCAAGTTGCAGATGTCACAACTGCTACAGCTATGAAAT TATTCAGATTCACCAAAAGCGAAAATTAAtgaatatataatataaatacA GACAATTTTAGCTTTTAAATTAAGATCAAAATGCAGATGGCAGGTAAAAT GATGCAGTCATAAATTCTCTTAGAATTTGAAGCATTCGTGATTACATTTT TGTGTTGGATATTTTTGGAAAGAGCCatcgaaatttttctttttcgtgtt tttatgagatttttattcgagatttctttattcttttcaTACCACTTTTC ATTTCTTGTTGTGTTCGTTCCAActgaaaagttgttttttttgtttcatt ttgattcTTCTTGGAGATTTATATAAGTCATATAAAAACCTTTCCAAAGT CGGTTACTGCATCAATTTACGGTGGTGGACAGGGTAGCCTCACACCAACA GGTGTGTGGTCGCTATTTCTACCAGACATTTGATTACCGTGGGTATAGCA ATTTTTACCAGTTTTTGCAATATGCACAGTAATTGAATTAATATATTCCC TAGTGAGTTTATTTTGCTAGGGTAGGTATGTATTTTATGACTATTTCATC CTTGTCAAAGATACAGACCGCTATGGAAATGCTTTCCtttcagattattt tgcttTCCCCACCTTTTGGACCTGCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019267TCONS_00019267Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019267-proteinTCONS_00019267-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000323supercontigsc0000323:375334..382460 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
944.3 1002.63 639.1 594.35 576.69 453.25 765.31 778.02 1093.35 880.34 1065.42 1341.27 1027.97 936.65 1058.91 1055.92 997.73 1195.44 577.6 658.91 1313.8 1271.52 1274.19 1253.32 839.91 966.87 1098.24 1037.66 1074.47 1057.85