XLOC_010863 (gene) - C. hemisphaerica

Overview
NameXLOC_010863
Unique NameXLOC_010863
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000325:216556..218735-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010863 ID=XLOC_010863|Name=XLOC_010863|organism=Clytia hemisphaerica|type=gene|length=2180bp|location=Sequence derived from alignment at sc0000325:216556..218735- (Clytia hemisphaerica)
CATCATTACAACTTGTAGATCGAACAAAAAACGATCTCAACAAAAAACGA
AAATCCAACATGGCACATTTGAAATTATTTCTATCACTTTTGTTCTGCGC
TATTGCAGTTCAAACTGCTGCTGGCTGGTCGAGTATTAGACCAAGACGTC
TCCAATGTTGTGCTAGCTCTAAATACTACGTTGGCGTGTCAAGAACCAAA
GGTTTGACCGGACATCCAGGAGCAAAAGGCAAAGATGGAGAAGATGGGCA
TAAAGGTGCTGTTGGACCAAAAGGACCACAAGGAGACCAAGGATCAAAAG
GAGCCACTGGACACCGTGGACGTCGTGGTGATGTAGGACCAAAAGGACCA
AAAGGATTCCCAGGACGTCGAGGAGATCAAGGAGCTGATGGTGAACAAGG
ACCACAAGGACACCAAGGACCAAAAGGACCAACCACCAAAGGACCAGTTG
GACCACGAGGAGATCGTGGACACAAAGGAGCCAAAGGACACAAAGGACCA
GTTGGACCACGAGGAGATAAAGGACATGATGGCAAAGACGGTGAAGATGG
TACACCAGGACAAAACGGAGGAGCAGGACCAAAAGGATTCGCAGGACACG
ATGGTGCCAATGGCAAACCAGGACAAGATGGTAACCCAGGACAAGACGGA
GAACAAGGACACCGTGGACCACGTGGAGATAAAGGAGCTACTGGACATCC
TGGACAAGATGGTGAAGATGGAAAACCAGGACGTCAAGGTCAAGCAGGAC
ATCCCGGACAAGATGGCAAAGATGGCAAAGCAGGAGCTAACGGAAACAAT
GGTGATGATGGAGCTAGAGGAGATAAAGGACCACAAGGAGCACCAGGAAC
ACCAGGTAGTGATGCTGGAAACGGACCAGTTGGACCAACAGGTGCTGATG
GTGAAACAGGAGATAGTGGACACCCAGGAGCCGCTGGTAAAGATGGTGAA
GATGGTGCCGCAGGACACCCAGGAAGAAACGGAGAAGACGGTAAAGACGG
TGCTAATGGACAAGATGGTAGCCCAGGACCAGTTGGACCAGTTGGACCAG
TCGGTAAACGTGGACACCCAGGAGCAAAAGGACATGACGGTAAAGACGGA
AAAGATGGTAAAGATGGTAAAGATGGTGCCCCAGGACACAAAGGTCCTAC
CGGACACCCAGGACCAGTTGGAGATGCCGGAGATGCCGGACATGATGGCA
AAGATGGTGCTGATGGTAAAGATGGTAGCGATGGTGAATGTGTTCCATTG
AACTACGCTGTTTGCGCTTCAGAAGATTACGATATCGGAAACATGGTAAG
TTAATCTTTCATTTCAAAATTGATTGTTTTTTTTTCAACAAAGATAATTC
AATTTGGTGATTTTTCTGCTTTATTCAATAATCTGACGTTTAAAAAACAC
CCATTTTCAAAAGCATGGTTTTGTCTTTGAAATTTGACATTTTCTTTTTG
AAAGTAATCTTGCATTTAAGTATTTTGAGGAACGTTGAATTAAACTATTC
ATACTCTTTTTCGTCATCAGAAATGCTCATACCGACCAAAACGAAGAGGA
TCTCAAATCCGAGTTGTCGTTAACGTTAACGTCGAATATTCCCAAGGATG
TGCCAGATGGGAGGTTACCATTGGTGGAAAACAATGTAATTCCAAATATC
CACTCCGAAGAACCCGACTTAACCCAACTGAAGATTATTACAAGGATGAT
TTGAACCTTGAAGGTGTCTGTGATCGACCAGCTGGTGGACGTCCAATTGA
TGTTGTTGTCACTGCCTCTGGATGCAAAGCTGGTGGATATGGTGCAGCCA
AGAGAATCATTACCGGACGTAGCTCCACACGTATCTTTATCGAAGAATTG
AGCCATTAAATTGTTCATCCATGACGATTATGATTTGACTACTACAAAAA
ACGAAATAATGACAAAACGACAAAGAGACTTTTTAATAATGTAGATTCAA
CATCTATAATATCGATTATTATTTTTATAATTGATAAAACGCCAAATCCC
ACAAATTTTTGTACAAAAAATTTTTAACCTTTTCTTTTTATTTGCCCCTT
TTAAATATATTTTTAGTTTTATAAAATTTTTATCAGTATTATTTTTTTCT
TTTTTTGTTAGTTCATTGTTATTTGAACAATAAATTTTTAGCAAAGCATT
GAAAATGACTTAATAATTGTTATCTTTATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019342TCONS_00019342Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019342-proteinTCONS_00019342-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000325supercontigsc0000325:216556..218735 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
COL23A1PREDICTED: collagen alpha-1(XXIII) chain isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02	0	0	0.02	1.59	1.06	0.47	0.37	1.97	1.68	2.37	3	213.29	248.29	5031.26	977.84	88.56	39.46	2.4	2.06	0	0.09	0	0	0	0.02	0	0	0	0.02