XLOC_010903 (gene) - C. hemisphaerica

Overview
NameXLOC_010903
Unique NameXLOC_010903
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000326:153762..159290-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010903 ID=XLOC_010903|Name=XLOC_010903|organism=Clytia hemisphaerica|type=gene|length=5529bp|location=Sequence derived from alignment at sc0000326:153762..159290- (Clytia hemisphaerica)
CGTTAAAAGGGGAGGCTTCCAAATGCTGCATCGAATCTCAAGATATCACG
TGTCAAAAACGTAAGTATCCCAGCTGACACACAACGTTGTTCCAACGTTT
TTCTAACGCTCACAACGTCCATATAACGTTAAATGAATGTTGAAACAACG
TTGTGTGTCAAAAACGTAAGCATAAGAGATTTTGATCGAATGTGATTAAA
TTTCGAACCATTACCTCCTAGATGAGTGTTTGGTTAAAAGTTTTATTTTT
ACATAAGTGTTCCCGTCGTTTCATATCAGACACATATTTCATATCAGAAC
ATTGTCTGGCTATTTTTATGTTATGTTGATATAAGAAAAAAAATGTTTTT
CTTTCCTCTTTCCTCTTTCTGAAATTCTTAAATTAAAATTTATGAGTAAG
CAAACGATAAGTAGTCTAGTTCAAACCTAGTAACCGTTTTTTAATAATTT
TTCTCATAGCAAAAACATGCTCTGTAATAAAATCGACTTGTGCTCATTGC
AAATCTGGTTATTATTCAATGGCAACTGGTGAAAAAGCATTTTGTGACAT
GGGAAGTAAGAAACTCATCTTTCTTGATGATAAAGTTATATAAAGTAAAA
TGAAATTTCATTCTCAAAAACCTATTCAGTCATCTTGGGAATTAAATATG
TACTCTTAGGTTCCAAATAAACGGGCCCCCCCCCCGCTTGTTAATTTTTC
GAAAATTTTCCAACCCCCCCGGACCTTATTAGGACCCCCCGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCTGTTTATTTGGAACCTAAG
AGTATTGACTCAATAGAGAATTTCAATCTTCTTCCAGTTATAACCAATGT
TCTATAATGATGAGTTTTGAGGGTTTTCTTCATATAAAGATTCTACCACC
TTATTTCATTCGGGAAGATTCACCGCGCCACTATTCCGCCATTATAGTAT
TTTTTCTTACGGGGGCGGACCTCTATTATTTGAACATTTCCGTAAATCGA
ACTAAAACATTATTCCCCTCAGCTGAAAATTGGTATCTATTACTCTCTGT
AATTCGAATCTTTTTCTATCTATTTTTCTATAGTATTTCTGTAATTCGAA
CTAAAACANATCGAACTGAAACATTTTCCCCCTCAGCTGAAAATTGGTAT
CTATTACTCTCTGAAATTCGAATCTTTTTCTATCTATTTTTCTATAGTAT
TTCTGTAAATCGAACTGAAACATTTCCCCCCTCAGCTGAAAATTGGTATC
TATTACTCTCTGAAATTCGAATCTTTTTCTATCTATTTTTCTATAGTATT
TCTGTAATTCGAACTAAAACATTTTTCCCCTCAGCTATGAAAAGTGGTAT
GAATTACCTTCTGTAATTCGAATCTTTCTCTATCTCGAAGAAAACTTGAA
TCAGAAATAGTCAACTATAAAAACAAATAAAATTTTTCATTGTCAAAAAG
GTGACGATCAGTTTATACCAAGTTGTAAAACAATCAAAGACGCTTACCCA
GAATCCTCTTCGGGTTTTTATCACCTTGGTTACAAAGATAACATCTTGGA
ATTTTATTGTGATATGACTGCTGATGCAGGTGAGTTTTTTTTTTTTAACT
TTTTCAAACCAAAATCAAAATTCTATACAGGGTGTACCGAAAAAAAGTAT
CGAATTCGAACATGATTCCGAGAAGAAGGTTGTGTGTGTTGCGTATGTGT
AACAAAATGTCAGAAAATGTATACCAACACAATAATATTTTTGCAACAGT
CATTATAATTGAAAATAATTAACTTTCTTTACAATTTTCATGACGTTAAA
GTTAGTGAGAATTGTTTTTTCGCAAAAGTTATTCATATATATGTCTCATG
ACAATTAATGGCACAGAGAGAAACTTTGATAAACATTCCAAGTTTAATGG
AACACACACAAGAACTTTGTTTACTTCTATTTACCCAGAGAAAATCTGAG
ATTTTGAGAATTTTACGTGGATTTAATNCCCCCCTCAGCTGAAAAGTGGT
ATCTATTACTCTCTGAAATTCGAATCTTTTTCTATCTATTTTTCTATAGT
ATTTCTGTAATTCGAACTAAAACATTTCCCCCCTCAGCTGAAAATTGGTA
TCTATTACTCTCTGTAATTCGAATCTTTTTCTATCTATTTTTCTATAGTA
TTTCTGTAATTCGAACTAAAACATTTTTCCCCTCAGCTATGAAAAGTGGT
ATGAATTACCTTCTGTAATTCGAATCTTTCTCTATCTCGAAGAAAACTTG
AATCAGAAATAGTCAACTATAAAAACAAATAAAATTTTTCATTGTCAAAA
AGGTGACGATCAGTTTATACCAAGTTGTAAAACAATCAAAGACGCTTACC
CAGAATCCTCTTCGGGTTTTTATCACCTTGGTTACAAAGATAACATCTTG
GAATTTTATTGTGATATGACTGCTGATGCAGGTGAGTTTTTTTTTTTTTG
ACTTTTTCAAACCAAAATTAAAATTCTATACAGGGTGTCCCTAATTAAAG
TATCGAGTTTGAACATGCGATTGAGTAGAAAAGTTTGTGTGTGTTATCGC
TAAAATATAAGAACGTTCTCCATCACACAGGCTTATTACAACAGGTAGTT
ACAACGTATAAATTAATTGTAATGACAAAGAAAAAAGAGAGAGAGCTTAA
AATACAATTTTGTGAACACGCACATAAAACTTTCTACTTATAGTTGTGTT
TCGACTCGATACTTTAATTAGGGACACCCTGTACAGGGTGTACCGAAAAA
AAGTATCGAATTCGAACATGATTCCGAGTAGAAGGTTGTGTGAGTTGCGT
ATGTTTAATAAAATGTAAGAAAATGTATACCAACACAATAATATTTTTGC
AACAGCCATTATAATTAAAAATAATTAACTTTCTTTACAATTTTCATGAC
GTTAAAGTTATTGAGAGTTGTTTTTCCGCAAAAGTTATTCATAAATAATG
TCTCATGACAATAGACCTAATCGGAGTTTTTGATTTTTTTTAAAAAGTGA
TGCATTATGGGATTGTTTCGAGTGTATTACAATAGAATTCCCTCGAGGAA
TTCCTAAGAGATTTCTATTGTAATACACTCGAAACAATCCCACGATACAC
CGTTTTTTTAGAAAAATAAAAAACTCCGATAAGATCTAATTAATGGCAGA
GAGAGAAACTTTGATAAACATTTCAAGTTTAATGGAACAGACACAAGAAC
TTTGTTTACTTCTATTTACCCAGAGAAAATTTGACAATTTGAGAATTTTA
CGTGGATTTAATTTCGTAAGTCAATGATCTAACTCAATTGTAATGGCGCA
AATTTACGAAAAACGCGAATATCGACATAAAGAAGGTAAAATTGTTTTAG
GCGAATGAAAGAGAATAAATACGGTCTGCATTTTTTTAAGGTGGATGGAC
AATGGTAGCCAACATTACAATAACATCAAACGCTGAAGCCGAAAGATATC
TTCTAAGAAATATCAAGCAAAATGGTTTAGGAAGCCTGAAAAATGTGCGA
TCGGGAGTATACACTTTATCGCTCGGAACGCTATCTACATTTCAAGAAAG
GAATGAGTTTACGGAAATCCGTATCAAATGCCAAAAGACGTATTTAGGAT
TTCAAGTTGACGTTGTTTTGGGTTATGGCTCCGAACTTGTCGGTGGTGTA
ACACCGGAACGGCATGTAAATTTATACCGATTCCTCCCGAGTGATTCCCG
ACACACTCAAGTATCGGGCAGTTATAAAAAAGCAGATTTTGCTAATTTAT
ACAATCATGCTATTTTCGTTCCTGGTCAATATCATATAGTCATTAATAAC
GATCCAAATCGTCGCAGATGGGAGTGTGGTGATTACGACCAGATTCAACC
CAACGGTAAAACCTACTCACCGATCGGATCATGGCAATTTTTTGTTCGAT
AAAGTGGAAACTGTTTCACATCGAATTGTGTAAATATAATCAAATTTAAT
CTAACGGTAAAACGTACTCCAGGATCGGATCAAGGCAATTTTTTGTTAGA
TCAAACATTGAAAAAGTTGCATAAACTTTTTACGATGAAATATGTAAATA
TAATTATTTTTTCCGCACACATTCAACGTACTCCACGTATAACCAGATTC
AATCTAACAGTAAAACGTACTCCTGGATCGGATCATGGCAATTATTTGTT
AGATCAAACATTAAAGAAGTTGCAGAAACCTTTTATGATGAAATATGTAA
ATATAATTATTTTTTCCGCACACAGTAAAACGTACTCCACGTACAATCAG
ATTCAATCTAGCGGTAAAACGTACTCCAGGATCGGATCATGGCAATTATT
TGTTAGATCAAACATTGAAAAAGTTGCATAAACTTTTTACGATGAAATAT
GTAAATATAATTATTTTTTCCGCACACATTCAACGTACTCCACGTATAAC
CAGATTCAATCTAACAGTAAAACGTACTCCTGGATCGGATCATGGCAATT
ATTTGTTAGATCAAACATTAAAGAAGTTGCAGAAACCTTTTATGATGAAA
TATGTAAATATAATTATTTTTTCCGCACACATTCAAGGTACTCCACGTAC
AATCGGATTTAATCTAACGGTGAAATGTACTCTCTGGATCGGATCATGGC
AATTATTTGTTAGATCAAACATTAAAGAAGTATTTTTTCCGCACACAGTT
TGATGTACTCCACGTACAATCGGATTTAATCTAACGGTGAAATGTACTCT
CAGGATCGGATCATGGCAATTATTTGTTAGATCAAACATTAAAGAAGTAT
TTTTTCCGCACACAGTATGATGTACTCCACGTACAATCGGATTTAATCTA
ACGGTAAAACGTACTCCAGGATCGGATCATGGCAATTATTTGTTAGATCA
AACATTAAAGAAGTTGCAGAAACTTTTTACGATGAAATATGTAAATATAA
TTATTTTTTCCACACGCAGTAAAACGTACTCTTGAATGCAATTAACGTGC
AAAAGAGATTAACGCAAAGGTTGATTCGAACTCGTACAAACACATTGATG
GTAATGATTGTGTGAAAAATAAAATATATTTTTAGATTCAGCATGGTTCG
CTATTTCGAGCTGTGGAGTAAGGTTTTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019415TCONS_00019415Clytia hemisphaericatranscript
TCONS_00019414TCONS_00019414Clytia hemisphaericatranscript
TCONS_00019413TCONS_00019413Clytia hemisphaericatranscript
TCONS_00019412TCONS_00019412Clytia hemisphaericatranscript
TCONS_00019411TCONS_00019411Clytia hemisphaericatranscript
TCONS_00019410TCONS_00019410Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019415-proteinTCONS_00019415-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000326supercontigsc0000326:153762..159290 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.52	0.61	0.4	0.15	0.93	1.23	0.32	0.19	0.11	0.08	0	0	5.86	4.62	0.51	0.35	0.24	0.17	9.85	11.72	0.81	0.4	0.31	0.58	0.42	0.47	0.1	0	0	0