XLOC_011267 (gene) - C. hemisphaerica

Overview
NameXLOC_011267
Unique NameXLOC_011267
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000348:222442..232524+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011267 ID=XLOC_011267|Name=XLOC_011267|organism=Clytia hemisphaerica|type=gene|length=10083bp|location=Sequence derived from alignment at sc0000348:222442..232524+ (Clytia hemisphaerica)
CGCACTGATAGAAATGCGCCagataaaaacaactttcttgacaagaaaaa
aacaaaagtgcAGTGTGATAATGTTTACTTTAGCAATTTAGATACACAAA
ATAGCTGATTTAATATGTACTTCTCAAATGACATGGAATCCAAGGTAGAG
GTGAACATCAGAGACGAATCGAAAGTTTACAAATGCAAAATTCAAGCCCA
ATAAAATGCTGTTCAGATGCAAATTTGCCTATCGAAAAGTGTGATTATAG
ACCAATCATGAGCCAGAAAAACTGGGAGGTTTTCCCAGGAAGAAACAAAT
TCTATTGTGATGGAAGGATAATAATGTCAAGAAGTAACTGTGTATTTGCA
ATGACTGTAATATTGATTATCGGAACTACTGGACTGTTCTTTGCTTTTGA
GTAAGATTTCTTTTGCTAGGTGTGGGGCCACCATTTTTGTTCCATTGTGC
GTGATGATTTCTTCATGAGTTTTAAGTTTTATTAAAGTCCATTTGCTTTT
TAAGCTAACAATAACTCTTGTTTTGCCTGCTATCTTTTACGATACGATAC
gatattttgtgaaaaattgtcCTATCTatggaacaaaagaaaatacctTA
CTGTATTACAAAAATATTACTGAAgtgtatccagatataattggcagtgg
aaacaagaatgcctggaATGCTTTTAATAGTCCGATGTAAttgcaaaaaa
tctttttgcttcttttagaaattcaaaagcgctatatttgaatgtatttt
ttgttgaaaaatgtgcGATTTTTAGCAGTTAAATTTgcaattgcaaaaat
tgagctttttttctgttttcgctacaacgttcatttttacaccagtgata
gttcaaccttaggttaagaagatttcaaatttcaaggcaaacagaaacaG
ACCTGCCAACTTAAGATGTTCATTTggcgtgagataaaaatttcgaagga
aaatcCGAAATCTTAGCccgattttgccaattttccgACTTCGGAGAacg
gaaaaatttttccaaaaaatcggaaaatcggggaaatttattccgaaaat
cagaaaatcggggagatttttttcccaaaattcggaaaatcggggaaatt
tattccgaaaatcggaaagtcggggaaatttctttcaaatataaattaaa
tgcgtgagaaatcaaacttttgaaaaattgcgtgAGACAGTGTTGGAATG
CGTGAGTCTCAcgtccaatagacctttttgcctttgcgtccgccatattg
aattgtatgcaaaaatacaggaacgaaaatgccgtggttggatttagttg
gaatgtatgcaaaacatatgcaagtttacNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNttgatttgatcatttggcggctctattcccaggagaataatttg
ccgtcagccgaataaggattattttttaccttcgcgggtgatttttcagt
ttgagattttgtctaatgttatggtcttttgaagtgcttgttctaagaga
tgagtgaatataagtgtttttagttttcaagagaagcaaatttaatcttt
cttctacaagattagactttaatataatgccaattatgcatgtaagtttt
tatttaatactttctttttgcatatgttttgcatactttctaagggaatt
tcaccacggcaattcggcaaccataatttttgcatacaattcaatatggc
ggacgcaaaggcgaaaaggtctatgcgtgagagttggcacctctgcagaa
aagtccttcaaaagatatgggacccaaaataccccttggtagtaCTTTTC
TGTGAAATCTTGGCAAATCTtcaactttttaataaaaacagggGTGGTGA
TGATCAACAGTTTTTCAATCATATATTATAtcacattttacgatcttttt
acgataatgacctcatagccaaactgtgctTCACatatagaagatctttc
aaattcagtatgtgaatagagcagtaaaaaatacaacttttctatttttc
cttttttgtgccaaagttctaggaatgaaaataaagggataatgataatt
gaatactatccatccattgatgatccgctgCTCTATCATAAAGCTAAAat
cgctttgcgtactcttcgcttaagaaaatgattgaccgattgaagttttt
cactcGCACGGGAGCCCGCTGACGTTCTGTATGGCGCGCCAAATTACTTT
TTatcaccaacttttttttcgacaccaactttttttttcgacaccaattt
ttttttttcaacaccaACTTTATTTTTCGATAtcacaataatttttttta
tacttttattttccgatactaACTCTTGTCTCCATTACCTGCTAACGTTG
ATTACTCAAAGTGTAATACATGCACATGCGCATCCTCCaatcacagattt
ctgtaaagcccgagaagggctagatggagtgctttaagctcttccaagca
aaaaaaagtgaacatctgaaaaaatatttctgctatttttttcaaaaatc
cgcaaagcttctgattggtcaagcgctgaaattctattataatGTCATGT
GACTTAGATAGGATTTCCTATCTAActttgacacactttttagcaaaagc
acgccatctagcccttcgggctttactaCATCATTGCCGATCATCCACTC
TGCTCTAAAAAGGTGGCGTGATTGGGCTtcacccattgagtttcaagccc
gaagggctcttagaggcgaatctttaacccttctcaggcaagagacaTTG
aaggtaccttatcggggaaaactttgtcggggaaaattttcgttggtgaa
aatttttgttggggaaaaatttgtcacttgctggtagttggtaaacgcat
taaggcagGGGAGAATTTTTGTTGGGGAAAATATttgtcacttgtccaaa
atttcgtctcttttccctgacgaagttttccccgataaggaaaaaaaaaa
agtttgtgtcaGAGAAAAGATAGTATATATGAAAAAACATGAAGTTGGTC
gcataaaataaaaagttggtatcagaaaaaaaaattgatgtcaaaaaaca
aaagttatatatgtcaaaaaacaaaagttggtgtcgaaaaaaaaagttgg
tgtcaaaaaaaaagttggaaataaaaagtaattcgGCGCGTCATAGTTCt
gcgagcgttctcggctcaatccttggaCCGCGCTAAAAGTGGTAGACtta
gctgtgatagatcatttcaatggaagttgttggaatgtttacaaggctct
tgatagaaaatcgtttgttttattgtTGACAGTGCGGTTATTGATTTTGT
tagatctgacaaattgatgtttgtaagtgcactttatagttttgattccc
attgaagaatcatattctggttttcatgttattagatgctgttttaggcG
ACTGGGGTTTGATTCCTACTCGCGgtggcaagtgaacaaaccttcgcccg
ggttaactcatgccatgtgaggggaattgggtagtcagtccaaggtgctg
acagggtgctcattgaaagcgtctatagttgcgaacaTAGGCCTCAAAGc
ttcctgcaactcaaccaaatagagattagagctttagagctagcctgctt
attaacacgaattgaaagaTTTCGTGTTACTAAAAACCCCCTTAGTTAAA
ACCAGccatggtgtccttgaaaaagcaaataaaatttgtgttaatttttg
cgtgttaatttttgcatgttaatttcaaggccattgaatacttgcctagt
aatatctGTGTAAGGGGAGTCTTCCAAACTCAGACTTGCCACATAAAACA
TCAAATGGACGTTTTAATTTCGAACCCCTACCTCCCTTCAAAAAACGTCA
GCCGTGCAATCAAACTTGATCTCAAAATATTCAACCCTTCTCCCATCGCT
TGCTGTAAATATTCCATTGTTGTTAATCGTATTCAAATAtccttgtttta
gccaaatttaggaaattaactgagaagaaattctttctttttcttttatc
ctttagaggacaaatataagtacattatgtgaaaatttcaagtctctagc
actttcctaTCCGAAATTATCTTGATTGAGGACGGGATAGAGGtatctct
cgaaaacgaaagtgcccaataactggtgaacagtttgatgtatcaaaaaa
ctcttttttctacttttacattgctataaggagactttatataccaaatA
TCATCTCCTTATGATCACTACTTTAGGAGATACAagggatattagccaaa
ataatcccgattttacaaaagttccaatgaaagaaaGATCACTGTGCACA
GTAAACCAGAATGATATCTCTCAAAATGTTATTGAGcccaattttgaaga
aaaaagttattTCTGGTCACTAGATTCAGAAATGTCTCAAAAAAgtggtt
tttaaattttagggaattcctcgagattttctcattggTTTTCTTCAGTC
GttctgtttattttattttttgaatttgaatgttttCTGTTGATGAGCCA
GGTAgttccataaaagtatcacttgtttcttcATTATTAATCTTCattca
aattaaaattgaaaaagtttctacTAAAAATCATAGTGCTCTGAATGATC
TTTTCAACAGTGTGATATAATTTGTTACAATTGAAGGATTAGTCCAAAAA
TGGTATgcaaaagaaaatcttaaagCAATCtaattcaaaacttttattaG
AAATTGGACATTTTATTAGATAGTAATATTTGGATTATTTTTTACAGCTG
TCCATACTTGTCTGAGAAAGTGACACTTGCGATTCCAATAGTTGGAGGGT
TGCTGTTTCTGTTTGTTATGGGGACATTGTTAAGGACTGCATTCAGTGAT
CCAGGAATCATACCAAGAGCACAAGCCGATGAGGCAGCTTACATAGAGAA
GTCTTTAGGTGAGATTTAAAACTTTACTATATGATATGTTGGTTTTGAAC
ACTATGTAACCAAAAGTACGGATAATTctgtctttgttttgattttaaca
aTATTCTTAGAAAATTAAATGGATTTCAAATactctttgaattttttctc
tttcacAGCTCCACAGACTATGGAGCCAGGTGTTTACCGCCCCCCTGCAA
GACAGATGGATGTGGAGGTCAAAGGACAAAttattaaattaaaatattgC
TTTACGTGTAAGATTTTCCGACCACCTAGAGCATCCCATTGCAGTATGTG
TGATAACTGTGTAGGTAAGTAGTGAAGCAAtctcttttcttcttcaaaac
TTCACAGCAACAATTTTATCAGTTGTTTCATATTCTGATCCCCTCAAAGG
ATTTAACTTATTTTGTTGTGTGTAAAATTAATTAGCATTTAAGTGGAACT
taagatttttaagatttttaagatttttagtGAGAAATGCATCTTGCAGG
AactaaattttatattttaaacaACTAAAATGCAAAATATAGTACCCTTA
AGAAGGTAAGGTTTCAAATTAGGGTTTAAAACCAACacaatatttctttt
cttttagaaCGTTTTGACCATCATTGTCCATGGgtaagttgaaaaaaaat
tatgatttgaAACATAGCTAATCAGTTTTTGAAAACGACTGACAAGATTG
CATATTTTCACTTATTAATTCTCGAAATTTCATTTATATTCCATGGTCTA
GTGGAGAGCTGAAGTATTTAGTGGTCTTTAATTGATAAGAATGAACATTG
AAATGTATATTATATTGAATACCTTACTTATCCTAAGTATGACACTTAAG
AAGTAAATACTTGGAACCTAGTCAAGTTGATTTCTTTGTGTGAATTTTTC
ACCAAATAGCTATTTACACCGAGagctttctttttgcttttccaGGTTGG
CAATTGTGTAGGAAAAcgaaattatcgatatttttatttatttttggtaT
CATTGTCAATACACTGTATATTCATCCTCGGATGTGTTATAGCTCATTTA
GTACTATGTGAGTATATTTTGTGTTGCTTTTATTCATTTTCCTCAGAATT
TTTAAAGCACTAAATgtttattttagaatttttgaagaTTACATGGAATT
TAATGTCATGATAACAATTTTCTTATCTCTTTTTAGTGAGTAAAGAATTA
TCATTTCTAGACGCTTTAAAGGAGACACCTACCAGATATCTTTTCATATT
TTGTATAAGAAATATTCTTGTGAAGGNCCCCCCCCCCCGCTTCAGAAAGA
TAGCTATCAAAGGAGGACGCTATACTTCTATTatatttcttcaatttttg
acgTTCCCCGAGCAGCCCTGAAGAGTGAGCAAGGTACACACTATGTTTAA
AGGTGGTTAAAGGATATGGGGCTGAGACTTTGATACTGCGAATGGGTATT
CTTGAGGTTTTAACACTATACTGATATCTCTGTCTAGTCATGAGAGtact
gttttatttttcttcaacaACAACGTTATATTTTCCTTGACGTTTCTTTC
ATCTACTGCTCTAGTATTTATAATTAGTTTCTTCTCGGTGTGGTCAGTGG
CTGGTTTGGCTGGTTTCCACACATATTTAGTATCAAGTAATCTGACAACC
AATGAAGATGTAAGATTGAATCTTTATTTCCTTAATGCTTTTGTTGAagt
gtattcatgatatgcaccactgcaatgacttcacgaaattttgcaacttt
tctgttcttcttccacccaatacgtcactttttctattgtttatgtGACG
tactgggtggaaaattttaaaagttacttcagaagactctccagtggtgc
atatcatgaataccatcagtatataaaaaaAGTCTTCGTACTTGAAGAAA
TTTAATTAAGAAAAAGCACTCTCTCGTATTATCACTGATCTCTACAAAAT
GAAGAGGACCTTTAACGAATTGTGTGCTTTGATTCCGTTTTCCTGTGAAA
TACTTCAAAACCTTTGCAAAAAGGGGAAACACCTACGACATTATCTCtac
catagtgtcctccagggtttgttccccccaccaaattcttgattttttta
aatttcccccctctttttattcccctatgacttttcggttttttagtttc
ccccctcttttttttcccccccagaaaatactgaaaatatcagttccccc
atatacccatataaatttctcaaatttcaacctgacacaaacgtaaaatt
ttgctgcaaaagaaATACTaaacaaaatagaacgaaaattggttaatttt
tcaatcatgatctaatcacataATATCATGTagactgaccttggttgctg
agataaagttaaagtgatttcacacttccccccaccaaatttgcctACTA
TCGATGTTTCCCCCCTCTTCCCCCCGCCTtcactattcaaattttcattt
ccccCCCCCTCAtccattcaaaattggaaaattggttttCCCCCTATTTA
TAAATGGGGGGGGCGGGCGGGAGGACACTATGTCTACACAAAAGTTTTGT
TATTGTAGTAATGGTTATAGGTTTTTTTTCGCTCTAAGCTTTTTTATATG
TCTATAATACCGTTACCTGATTTCTTTCATTAGATCAAAGGTACTTGGGC
CGCCAAGCGtggtgaaaaaaatgaaaaccctTATAGTGAAGGGTCATTAT
TTGGCAATTGTTGTCGCGTAATATGTGGGCCTGTTCATCCAAGGTACgtt
ttactttcattttgagaaaacaatttatttttgCATATCAACTTCTGCAA
GGTATACTTATTATTtgcttttaaaacttttcaaaactacaggattttct
ctttttacaaatctttttaaGCTAATAAGTGATAACAAAGCTTTTAAAAA
GAATTGGCTCTGACTTTAGCTTCTTCTACTGTGTTCTCTTTTAGTCTCAT
ACGACGTCGAGATCCCGTCATACCGGAGGCTGAGAAGAATGACGTCAACA
ACAAAACTAATAATACTTCTACTGCAATAAGTGTAAGTGTTTTGCAAATT
TTCTATTGAACCACCATACACTAGAGTTTTACAAGttttgacttaaattt
tgaaacaacGTCAGTTCTTTGAAACCTTAAAATGTAATGACTTCAATCTT
CCCGCATTATATCACATCATGGACATAACTTCTTGCATTACTGAGGCACA
ACGACAACTTCAAGACTGTTTGAGGAACTtctttctcatcaaaatattgC
CAATTGACTAGCGAACCTTGTCTGAAATTCAAAGTTGACATATTTTTTGC
CCATGCGTTTTAATCACATCGCAATGGTATAAAATATGTAACCATTTTTG
TTCACTATTCTTTACATCGGGATGTTTTCTTTATATCGGGATTATTCTGT
TGATGTCACTTTTGGATTGTTCTAAACTTGACTGATTTACAACAAGACGA
TGTCTAATGACTATGACTTTGACTCATAACTTACTCGTTACAAacatatg
aaaatatttaccaTTTCACCGCCCATTCATTCTCATTCTCTTTCAACAGA
TACCAGACGTACCACCCACACCGCCCATCATACATGACATTGACACTGAA
TCCTTACAGTCACAGAGTGCGCCCATTCTTGGAAACAGGACGTCTATCAG
TTCAGACACTTTTCATGACGAGAGTGAAAATGGACTCTTGAAACTTAGCA
GTGTATGATAATAGCGATAAATAGTGAATTAACGATTGCGCATCCGTTTA
AGATGCGATAGACACTTAAAATGACTTCATGCTATAGCAGTGCATTGTAT
TATTATGGTTAGATGAATTTTATCTCATCCATTTTCACAGCAGCCGGATA
CAGAAAGTGGGGATATACTACTTCACGATATCGCTTCGATGCCGTAAAAT
CAAACATGAGACTATTATGGTATTAGAGTTGTTTTCGAAAGCAATATTTC
TAAAGACATTTGTTTGCTTGGAATATGCTTGGAATTCCTACTTCGTTTTA
CCATTAGAAAAAGattaaattgtcttttttttgtttatataacTTTGACA
GATATTTTGTTGATAATATTTCTAGAATTCTAATAGAGGAGATATTTCTT
TTTATGCttattgtaaattttatttttggccaTATTATTATGATGTGGTC
AAAATTCTCACaatattttttcacaatttttaaagactttcattcttttt
cttgcatttttacACTTTACACTAactaatgttttttctttactgttttt
tttaatttctcccCCCAATGGCGAAGAATTGAATATTTGTGGATCCAAAA
AGTGTGTGTGGAATATTTACGACAGTTATTAAAATCATCCTCGAAAActt
ctgaaattaaaaaaacaacatcattTTTCAATAAGGATTTTCATGTATAA
tattatattttacatttttggtTGCTAGAACAGGCTAGAACACTTTTTCA
CTCAAGTTTGGAAGGAAATTTGAGAACACGACAATTGTATTATGGTATAG
TTGtatattttataaattcttTTTTGTATACACTTTTTCCTTCGAAGAAT
CTTCTCTAAAGATATACTAAATAAATATCGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020045TCONS_00020045Clytia hemisphaericatranscript
TCONS_00020046TCONS_00020046Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020045-proteinTCONS_00020045-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:222442..232524 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ZDHHC9palmitoyltransferase ZDHHC9 Homo Sapiens
ZDHHC18palmitoyltransferase ZDHHC18 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.43	28.17	9.95	8.29	90.17	65.19	47.79	48.43	43.66	40.48	31.61	33.47	30.14	26.06	25.08	29.39	43.1	42.32	23.49	30.55	42.07	39.4	46.8	45.35	24.82	27.98	35.55	27.94	29.83	33.42