XLOC_011344 (gene) - C. hemisphaerica

Overview
NameXLOC_011344
Unique NameXLOC_011344
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000350:19406..29102-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011344 ID=XLOC_011344|Name=XLOC_011344|organism=Clytia hemisphaerica|type=gene|length=9697bp|location=Sequence derived from alignment at sc0000350:19406..29102- (Clytia hemisphaerica)
CGATCACAACAAATCAGATAGTCCAATAATTGATGAGCGATCACAACAAA
TCACATAGTTCAATGATTGATAAGCGATCACAACAAATCAGACAGTTCAA
TAATTGATGAGCGATCACAACAATTACACGTGCATAATGGGTTGAAATGA
TTCTATAATTTCATAAATCATCCATGTCCTCCGTTTGGCATCATAAACTT
TCTACGTTTATCATTACTTACTTTCGTACAGGTTGATATACCCGTGGAGG
GCCGACCAAAATTGGGCCGAAACGGTAAAATTATACTCTGATTTTTGTCC
CCGTTGAAAATAATCAGATAAGCAAATCCTCACTGCAAAATAATGTGCTA
TTTTTTCTATCTTTACCCCCACTGGCTGATAAAATCCCACCGCCGGGTCT
GTGAGAAGGTGGTGCTCTTAGGAAATGATCAATTTCTCTTTCTCGCATAC
ATCTGTATCTCTAAATATCACGTTATCATCTCGATGCATCTATATATTAT
TTATCTCCTTCGCATTGTCATTTCTATAGAAAATGGTCAGCTTATCAGAC
ATATGCGACAAACCACCGCTCTCCTTCACTCAATACCATTTACTAAAGAA
ATTTTAATTGGTTTGAGGAAATATTCATTTGTCGAAATAACTTTTTTTTA
TGTTGGTATTATTTAGATGAAAGTGTGTCATGAGGATGTCTCAAGCTGGT
TAAATACTTGTGATTTGTTTTACAATTGACTGAATGTGGAGGAAAAGCTG
ATATCGTTCTGGATTTGTTTGTTTTGGTGAGACACGCTCATTTTTGCTGA
CGATGCATTCTACCTGGAGATATATTTCATGTGTCGTGTGTTTGATATTG
GCCCCTCATTTCACAGGTATTAACCTCTATCTTTTAAAAGTGTATTACCT
TAAATTAAAGGGATACTGGCATGCGAAATGAAGTTTGTCAGGACATAGCT
ATCACGAAAAGCGTTTCAAAAATTCAAGTTAAAGTTGTCAACAGTGATTC
TATCCCAAGATGTCGACATCCAGAGTTCCAAATTCTAGACATTTGCACTC
TTCACTCAGGCCGGAATCCCTTTAATTAAAAAATCCATTTTTCTTAAATG
AACTTTCAACAATTCAGGGATAGTTTTTCGAGGGCCCAACGAAATGTATA
TGGTTTTGGAAATGTATTTGGTTTGAGAAATAAACACAGCCTCAAAGCTG
TATTTTTTAGCTTCGCATAATTAATGAATCGACAAAGTAGGCATGCGCTG
CCTTTGATAGGTAGACTAGGCGGTAAACAAAAAAGATCGAACATTAAAAA
AGCCTGGATAGCCAGTTTAGTGTGTGACTCATTTTTTGAAAATATTTGAC
TGAATGGTATTTTCAAATTTGTAATGATCTAAAAGCGTATTCTTAACGTT
CTGTCAAGACAATCAATTCAACTTCTTGGTCTCTGAAGGAATAATCAAGG
TTTGTACGGTAAAATGGTGAAAAAACTAAAGTTCAGTCAACCCAGCTGGC
ACACAACGTTGTTTTAAAGTTTAAATAACGTTATTTGGACGTTATGAATG
TCAAATGGACGTTGTTTTGACGTTGTGTGCCGGCTGGGAAGACATGAAGG
TGGTGACCGCCAAAATGTGCTTGATTGCTTTTAAATGGCTGTGGCAGTGG
TCAAAGAGCCATGCTTAGAGTTGGAAGGGAAATGTATGGTTTTTCAATAT
ATTAATCATATAAGCTCGAGGATTTTGTCACATCAAGTCTATGAAAATTA
TGATTACTAATCATCCTTCGATTTAAGTCGTGACTTGTACTGATGTCCAA
ATGTAATTAGTAAATTGCAATCACCCAAAAATTCTCATTTAATGAAGTAT
TTAAAAAACCATTAATCATTATCATTGCTTCCCTTTTTGTCATCTTAAGA
AATTAATGATCTGTTTTTACCAAGCCACTTTATTTCCCCATTAAAAGATG
GCCATAATTTTCTTATGAGTACGGTAAACCCATTAAGTTGAAAACCCCCG
TGTCTTACGATTTGCGCCGCATTTAGGATTTAATTTATCTCTTTCATTTG
TTTTTAATAAGCCGCTTATTTTTCGAAATCTGGCGATGGCTTTTACTTTC
AATCGGGCGTTTGCGTGCGAACCGTGGGTCGCGCATTTTGGATGGAAAAA
GTGGCTTCATTTTCCATCAAGAGGTTTCAAACCTAGCCTAGCGTTCGGGC
TTTTATATAATTCATTAGATATTTGAAGGCTCTTAAAACTTAACCATCTG
AGGAAAATAGATGCTTTCCCGAATTCTTCAATAAATACATTTTAGAAAAA
AAGGTAGAAATGTTAAAAAAGAACGAAAGGAAGCAGTGAAAGTTTTCACG
ACAAAAAACTGCATTTTCAAGTTTGATTTCTTGTCTTACATTAATTTCCG
CGAAAAGAGATCGAAATTTGCTAAAAAAGCTTTTCTCCCGCTAAAGTTTT
TGCCTTAGACGTACCCGTCTTTTGATTTCTTCAAAACCTTTAAATTTTCA
GTTGTGTACAGCAAAGGTCTTCTTTAGACTGCAACAATTAATGCGAAGGT
TAACTAAGCCCGTATTCAAAAGTCTATGACACACGGCTAATAGCAATATA
GCGTTTTCGGCGCTTTAAAGATTTTTATATTTACAGATTTTAAGTTTGCG
TATTCAGGCACAATTTATCATCAGATTTATCCTAGTGAATCAAACTAGCT
TAAAGATTTCCAGGCTAATGCAAAGGCGTGTATTTTTCAGATAAACATGT
TCACACGTAGGGGTTCCGTTTCGCTCCGAAACTAAATCAAGCCATTCTAT
TGGTTAAAGTCAAGATTTACGTCACTTCTAACCAATAGAATGGCTTCATT
TCATTTCGGAGCAGAACAGAACCGTTACGTGCGAACAAAGGTTTCATTTT
TGGATAAACATGTTTCTTACTTATTTCTTCAGCTGCGGATATAGAGAAGA
CAACAACGTACAACATTTCGACCGGTCAAATCGGGTCATCCTTTCTCTTG
AATTGCAAATACGAAGGCTTCTCTAATCAAACATTAGTGTCATTACAATG
GCAACTGGACAACTTACTTATTTATTACAGACAGTTCGAAAAGAACCGTG
GACGAACGATCCAAGATATGGAGCAATTCTTCGATGGTAATTCTTTGTTT
TCAATTTTAATTAAAACCATTTTCGTCGTAATGAATTGAGAGCAAACAAA
GTTTCCGTTAAGTGAGTTGATACAATAGCCTGCCTCCCTTTTCTAACCTT
CTTGGTTCTTAAAAAGGCTAATAAATACTCCGGGTAAAAGATGAAGATTT
ACAAAATCAACAAATGTTCTCGATCTGAAGTGGTGGAAGAAAATGCTCTC
CATTCTCCTAATGAAGGAAAACTTTTTACCTCGTTTTAGTGAATGTCAAC
TCTCAGCCTTTACTAACTACTTCATCGTTGAAACTGGAGATACTGCGTCA
ACATTTCTCTGGTACTTACAAATGTATCAAAAGTGTCCGCATTCAGAGGT
TCAACTCTAAACTCAACAAGACTGAAGATGAGACCAAAGTCTTCACTGAA
ATCCATTCAGTCATATTCGAAAAAGGTGATTAAATATAAATTTCTCTTTT
CTGATCGTCTCGAAGTTTAATTCGGTCCACAATAATTCTTCAACATTTAA
CAGAAAAAGTAGACCACTAAAAACTTATCTAAGATTAAGAAAACTTAAAA
CAAATGGTCCCAGTGGATTTTCTCAAATTTTGAATGAGTCTTTCGACTGT
TGGTTGAAGATCGGAGATTCAGAGATTGATCTTTAGGAGAGCTTTCCAAC
CAACACAAGTTTGCCGAGGTGTTTAAGCATATTATCAATTTCATTATATT
TCCTTTTGAATCTTTTTGCAGTGGATTTCTTACGTCAGCTCCGTGATGAG
ATTAACGAGACGTGCTACTCACCTAAATTTGCTTCACCGAAGAACGCCCG
TTTGATTTGGGTAAAAGAGGCTCAACTTGACGATGAACAAGCCGACCTTC
AATATAATAACGGCACGATAATTCGTGATCTTTCGAAACTCGACGAGCGA
TTGCGACTTGATTCGTTGACGTTGCTCGATACAGGAACGTACGCGTGTTA
CGATCGTGGATTTAAAGTACGGTCGTTTTCACTACTTGTTCTAGGTAAGT
TAGTTTGGCGTCCTAGAATTTTTCACGTAGAGTATTGCTTGGTTATTTTG
TGGGTATTTTGATTAGAAAATAATCATCTTTTCATTGGAGTGAATTACTC
ACTTTTGGATAGAATCTTAGTCCTGAGCATCAAATCGTCCTAGTCTATAT
TTTGGGTGATTAGAAATTAACGTGAATTTTTAATGATTTTTAATAAAACT
CTATGATAAACTTTAAAACTTGACTTTTAATGAAAGAAACATAGTTGTAC
TTTCCAGTATAATGCTCTACTGTTATCTGGTTTTGTATTGAAATGATACA
GGTTTAACTAAGTAAGTTTGCGACCGCAGTCGAGGGCGACCCGAAGGCTC
CCTTTTCGTATAGCTGTCTACCCGAAGGTAGGGGAGGGCGCCACTCCTTT
CCCTGGATNNTTTTAGTTGCTGAGCATCAAGCAGAGAGGCATCAAGTACC
ATTTTGGGAATCTTTGGTATGACCCGGCTGGGGTTCGAACCCACAACCTT
GCGCACTGAGCTGGATGCTCTACCTTTATGCTACGGTCGCTTAACTAAAT
TAGCTGAGGTGTATGTGCAATTTGAAAGATTTCTTTAAAAAACTTAACAT
TCGTTTTTAGACCATGTAACAGCGCCAGAAAGTGAAAGTCTGGTCATTCC
ATGCGGGCGAACCAACAAAGCCGATATTCACATGATCTCAAAAGACAATG
ACATCATTTATTTCGATGGTGAAATTCGTTGGCAAACTGAAATCTATTCT
TTGAATGAGAAAGGACATCTGGTCCTCTCGTCTGCCGTACCTGAGGATTC
TGGGATTTATAAATGTTATGGTTTGAACAGCTTGTATAAAGTGTTGAACG
TCACAGGTATGAGTTTATTCTTTTTTTCAGGGGAGCTTTCAATCCAATTC
ATTCATGATTTCAACTCTAGTAGCTCCTCTGCTCAAGATGACGTTACTAT
GTCGAATTTAGAAGCAGCTGAAATTGAATAAATGCTAAGAATTTTCACTG
CAGGCAGTCAAAGCAGATGGAAAGAGTGTTTGTGATTCGATGCGTTGCTA
ACAGTTACGTTGTTGAAATTTGAAAAATATACGAGCTCTAAGGCGAGACA
AATTTATTATTGCTCTACGGGAAGACCTCAGAAAAATATGGATGGGTTGG
TTGGTATAATAAAAATAAATTACCTAAAATCTAGAATCGGATGGTCAAAA
TCTAAAGAATTTGTGGCGTTTTGAAGCAGTAGACTTTTTCCTCTTCATTT
CAAAAAAACTAGAAAGTCCATCCTCTTGCAACTCGTTTTTGGGGACAACA
GGGTCGGTCGAGCCTGTAGAATAATCAATTGTTCATAATCTCCCCATATA
ATTTTGTTGTTTTAGTTGAAGGCGATTTAACTGAAAGAAGTATGTATTAC
TGTTTCATTTCTTATTCCTTTGTCAGATCACTTTTGAATGTTAAGGGAAG
CATCTTAATATCAAAGGGCAACGTTAGAATAACAATTACCTTAGTATGGG
GATCTTATTCATTTGATAATTTCTGTTTATTAGTTGACATTTTGCTACGG
GCCAATAATGGGTATATCGTTGAATTTGATAAAGCTTTATGAAAATATCT
TTTGAACACACATAACCTTTTCTACAATCTTTAGACATCTCGATTCGCAA
TATTGAGAAAGTAGCACTAACTTCATCAAAACTGGACATTGAACTCTCAG
AAGATGTAAATCTTGTGTGTACCTTCACTCCGGGTCTGTGGCGAGTGTTG
TATTTTTTGCATAATGACGTCATCATACATGTGGAGACGATAAAGAAGGA
ATGGTCACAAATCGATATGTCTCGGCACAAGCACGAACGTAAGATAATTG
TGTAATAACGTCATTATTTTTGATTTGTATACTTTAATTTTCCTCGTTTT
CTTTCAGCTCAGTCAGGGAGATCGAGACTAATTTAGTTATTATTCTACTT
TTTCTTTAAACGGAATATTATGCAAATTATTGAGGTGGTCAGGACTGACG
GAGTCGCAAATTCAAAAAGTTTGAAAATTGTATCTGAATTAATGGCTTCA
GATCCTACCTAGGAGATTCACTTCTAGCCCTTCGGGTTTCTATTTCATTG
TCCGAGTGTCTATTGGGCACGGTCTTCCCAGTAACGAATTCTGTTTGTAG
ATCAATTTTTCTCTCTAAATGGTATTCTTTTCTTTCAGTAACGGACTCTA
TTTACACACTTCACTTGGACAATACGACCACCAAAGATCTTGGTCGATAC
AAATGTCGTGTGCAATATGAATTTCATATGACCGAATCTGCAGAAGTCGT
CATCAAATCATCCAAGCCAGGTAACCCTTTTATAGAAACAATGAATTATT
GTCGTGACACTGACGCCTCCATTGAGTTTGTTATATTTGTATGACAAATA
AACTTTGCTATTTCCCATTATCTAAGTTTGTGCCTCCGCTACAGCGGAGT
CTTGCTAACTCGAATTTCTCTTTAACTCAAACAAGTTTTATCGTCCCTTC
AGTTAACAATGTCGTATGAACCAATTTCCATACCTCGAAATGTCCTTAAC
TCGGACAAATAACCTGTGCGTGATCGAGTTATGGAGATTCCCCTGATTTC
ACATATTTCTTTATAAGCTCTTGGTTTTATTCAAATTTGATCACTTTTCA
TTCGTAAAATTTTAAACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCTGTTTATTTGGAACCTAAGAGTAACAGGTTAGTTAATCCAAAATTTA
ATAGAAACATAGAGCTATTAACCTTGGAGTCAATTACTCAATCCCGTCAA
ACTAAATCTTCGATCGGAGTTTTTCATTTAGAAAGCACTACCCTAATGAA
AGGAGCAAAACTCAATAGCGGTTTAGATACATCGAGAGCGTTAAATCTAC
TTTCCCATGAGTACTTGTTATGTAGCGCTGTTAATACTGTATTAGGTCAT
ATTTTAACACTGCAATGGCTTCTGCGTGTATCACTTAAAAAAAAACTCCG
ACCGAAAATGGCGGATAGAGCTTAATCCATGGTTTATAAAGGTTAGTGGT
ACCAATTTACAACCTTCTCAATATTATTCTCTCAATAGCTAGCCGAAATA
TTATACTACCAATCAAGAACGACAACGACACGTCATCGCATTCCATATTC
TGTTCACTACCGGTGCTGGAGAATCAACCGGTGTTCTGGTTCAAGAATGG
CCACCCGCTCCACCTGGGTGATCAGAACCTTGAACCCAACAATGGATACA
TCAACAACATGACCACATATGTGTTCAATACTGATTGGGGTTTCAACGGG
ATTTATGATTGTTATTCGGGTGACCGACATCTACCTTTCGATGTCATTTA
TTGTAAGTGTTTACAGAAAACTGCTAGCCTCTAACAGAGAGGGTTATTAT
TTTCTATTGAGTAATTTGGTCAAGTGAAAGAATTCTGAATATGTCATCCA
GTCGTAATATAAATTGTACATCGTTAAAAGATACGTCTTTTCGTGTACAG
AAATTCTAAAAAATTACTTTTCTGCTATATTTCTAATGAATTTGCTAAAA
ACTCTCACGGTAAGAAAGATTGAATTACGAGATTGACTTTGATTGGAATT
CTTGAAGTTAAAACTGTGGGCCGGTGAATAAATCTGCATTTCGTCGTTGT
CAAGACAAAAAGGAAAATCTCAAAATCATTATCTTAGGAAAGTGAGAATT
TTTCTATAAGATAAACCTTTGACAACGAAATTTGGCGTGTGTGGATGAAT
CTCTCCTCTACTCTCCTCTATAAGATGAAAGGGCTTATTTCATTGTCAAC
GGTTCATCTTATAGAAAGATTCTCAATATGCTAAGAGACCTGAAGAGACT
CATTTTGAGATTGGTCCTTCTGCTTTGACAACGACGATTATGAGTTGACT
TACGATATCTTTTCTTTTCTAGCATTCAACTTGACAGCGTTACCGCCTAA
CGCCACAACTGATGGTGTGTCGAGAGCTCCCGACGATGATGGTTCGATCT
TCTATTACCTTAATCTCAAAACTGTTCCCAGTTAACTATTTGTTTTATGC
ATTGAAATGGGTCTCAATAGATCTGACTTTGTTATTTATTGGCCTAACCG
CTGTTGACAATGAACTCAGCAAATTCCTAAAATGCTGAATATAATTAAGC
TAGGGAGATGGGCACCTTACAAAAATTACACGTATATTATGCCCTATTAT
ATGATAAGTATGTTTTATCACCAAAAAGTGATCTAAAATTGGCTAAAAAT
TTCATTTTTCATAGAAATCCACGACAACCTGACCATCAAGGGATCTCATG
TCGTCAACCACCCTGGCGACAATTTGACGTTGACATGCGACGGTTTAAAA
GCCGACAATGTTGTCGTTTATTGGTTCTTCGGAGAACAGCTTATTTTGAT
GAGATCTAGTTATGAAAATTACACCTGGACAGAATCTGATAATTATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020200TCONS_00020200Clytia hemisphaericatranscript
TCONS_00020199TCONS_00020199Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020200-proteinTCONS_00020200-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:19406..29102 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.61	19.07	13.56	9.76	114.82	83.87	53.2	58.28	27.13	35.35	27.12	25.33	23.83	22.94	10.43	17.18	25.86	22.43	21.61	23.88	23.98	21.43	16.41	20.22	59.34	51.02	15.85	12.38	7.3	8.94