XLOC_011361 (gene) - C. hemisphaerica

Overview
NameXLOC_011361
Unique NameXLOC_011361
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000350:494320..501247-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011361 ID=XLOC_011361|Name=XLOC_011361|organism=Clytia hemisphaerica|type=gene|length=6928bp|location=Sequence derived from alignment at sc0000350:494320..501247- (Clytia hemisphaerica)
TTTTGTTCTCTTCCAGTGCTATAAAAATAACACACAGAAAAAAACAGTTT AGCAGTTTATTGGATGTGAATCTGACGAACAACTTTCTCCGTCAGAACAC AACAACATCAAAAAAATCAGTAAAAATGGATCTGTCAAGAAAACTCAACT TTTTACCAATACATAATTGTTCTTTTGAGGCCAATGATTCCTCTACCCTG TCTCCTATGACAGAACTGGCGAACAACTTCGAACTCAGGTAAATTATTTT CTTTCTCAAATTTACAAAATGTTGAAAATTATACTCTTTCATGAAAAGTT TGAACTATGATTTTGATATTTTCTCTTTTAGTTCGATGTCTACGCCAAGA AGAAAGCTTGCACTTTCAAATTCTATGAACCCTACGCCTGAGAGAAGTCC TTCAGTTACAGAATCACTAGAATCAGGTTAGTGTTAATCTTTTAGTATTT GTTATATTGTTTCGAAGTCGGTTGTCACGATGGTAAGCAGATTAAGAAGA TGCTGTTTCGAGACAGATTGAATAAACAGAGGAGATTAATTTTTCAGTCA GAACACTATTTCGTTGGAAAAGAAATTTGATACTTTTTTTATTTTTCGAT TTAAAAAAATTTCTTCCGAATTTTCTTTTTTAGGTTACGAAGCAGGGTCT CCACTGTTTTTGGACGCCTGTCCAGAAATAGATTCACCAACCCTTGAGAG TATAAGGTAACAAACATTGTTTTGTTCTGTATCATTGTCTTTTAATTGTG ATTTTACAACTGGCAAACAAACGAAACCTTGTTTATAGATCAAAGATGAA ACCTTGATATTTGATGTATGAAATGTTTTTAAAACCTTTTTGTGTTTTTT TTTTTAATACATATAGAGCACGAAAACTCTCAGGGGGACCTTCTCACAAC CACAGTTTACGAAGGTAGGTTTAGAAAAGAAATATAAAAACTTTGTTTTG CCTGTAAACAAACCTTTCGGCTTTGCGAAAAAAACTTCAAGGGTTTCCCA ATTTTCCCGCCAAAGATACAAGGAGTTTTCTCTGAATAGCAATCACTATT GACATGGTTTTCCCATTGCAATTTTGGGGTTTTCTTTTTCTCCTTTTCGG TGCGTGCGTAAAACCTCAAGAGGGTTTTTCTTTGATGGAAGTCTCCATTT GAAATAGAAGGAGTCATTTGGAAAAATTTTGCATTAATTTCCTGTCGAGT AATGCTTTTGACATCACTTCCCAATTTCTGAATTGACCCCCTGAATCGAT CACTCGTTTTCAAAAATAAATTCGTCCGTTTACAAAACAATCGATAAAAC CTCAAAACATTTTTATTTTTTTTTTTAAACGTGAACCCGAAAGGTTTTTT ATTAAAATAGTAAATCCGCACGTGTATTTAAGACTTTATTGATATTTTTT TGATAACAGATTACCGAGATATTCATCTCTTTATTAACATCTCATCGAGA AAGAAAAACCCTCAAAACTCTTAACATTGAGAAATAATGAGTACAATTGT ACAATAAATCTCATCGCCGCGTTTCAAAAAAAAAATCTAAATGAAATGAC TCTCAGCTGTTTCCAGAATTGATCACAAAATAAGAGGGCTTCGCACTGAG CTTCTTAATTGTATTTACAATTAATCTATAGATTAACCCTTTTGCTTATT CTGTAGTAAATAACCATTATTATAATCTTTTATTCTTAAGCCATTAACAT TTTTTCCTCTATTCTTTTAATTTTTGTAGGCAATTGATGACCCGAAGGAG TTTTTCTTCACCTGTAAGTTCTGATTGTCTTTGGTGTGCTCGTCCACGGA GAGAAGTTGATCACGCAACGAATCTGATAATTATTCAATTTCCAATTAAA AATGCCATCTGCTTTTTTGAAAGAAATGCCAATTTTTTACTAGTTATTCT TCCGTTGATAAGTTTCAGTGTCCTCTCTGCGGAACATCTTGCTTTTAAAA AGCTCGTTGTTTTGTAGCTTTATAATTATATGAAGTAAAAATACTGGCAA TGGATTCCAATGTATTAATCAACTATCAAGATTTTTACCAATCATGCTTC ATCCTTCAAATACAGGTTTTACCAAGAAAGCCTTTGGAACCATTGAATTT CGACGACCTCGCAAACATTCAGAACAACTCACCGGCAAGGCCCTCCAAAA ATCTCTTGAAGCCGATTATCTTTAACAGCGGTTGTGAGAATGTGGAAGAA AATCACAGTGATCTATCTCTTTGCGAAATGTCGGATCAGTTTCCAGAGCT GAATGACGATTTCGAGATCAAAAGAAGGAAATACGTTGGACGATCGCATT CTGCTCCCACTGTTCAAAGGGTAAGAATTTAAGTTCAAGGGATTTTCGTG GTCTTTTAAAGATTCTATTTTGTGTAGGAAACACTTTATATATCCCTGTC TCTCAGTGTAAAATTTGTTTGAATAATTACTCCGTCAATTTTATTCGAAT TTTCAATCATTGACATTGTTCAAAATACTTCAAATTCTTTCGATACTATA CTTTTATTTCACTCGATACTTAGAATTATGACTCACGCGTTCAATTTGCG TGTCAGCAATTTTAAATTCATTGTTTCTCTTTCAAATTGTTTAAAGGATT TGGATATTTTTGATTCTGGGTCTTCTGGTCATTCAAATGGAAGCAACGAT GATGGTTTCTTTGATGAACTAACCAGTGATATCGCTGACTCAGCAATTTC CTTCAATGCACCCGCTAACTTGATGGGATTAATCAATGAACCTTTATGCT CTTCCAAAAGAAAAGTCAGCGATGTTGATAAAGAAAATCAAGTCCCTAAA TCGAAACCGATTTTCATCAAACCAGTTGGCATGCCAACTACTAGACCTCG ATCATGCTCATTATCCGTCAAAAGAGATAGCCCAGCTACGTTGAGTCCAA GCCCCATGAAACGAAAAAAGCGACCTAGACATGTTTACCGAAGCAAATCA TTTTATGATACCAATCCTGATGATTTGTACATGTCCGAAAAGGTTTGCCA TGCTTGATTTTTTTATACTTTTACATCTCTTGGTCACCTCTTTTCTGGTT TCTCCGACCAACTATTAAAAGCTACTAGAATAAGGTCATTAGTTTATACC AGGCTAGATGATTGATCGAAAAGGGAATATACTAGATGGAAAGTGTTTAA CACACTGACAGACCCGTTGCAAATTAGTTTTCGTACCTTATGCATTCATT ATTTAATGATAATACGTTCCGTTTCAGAAATTCGAGCTACCAACGCCTAC AAGAGCTTTACAGCGATCGCAATCATTCGATGTTAAACATTCCAAGAATG CAAATGTCGATATCAGCAAACTGTTTGGTATGTATATATTTTTTTTATAT AAGAATAAAAGTCTCTAAGAAGATTAAGGCTTCGGAAATTTTCAGAACAT TTCAAAGGCTTTGCGGACTGAAAATACAGTGGGGTTTACATAACTCGAAT GCCAACGGGGAACACAAATTTGTTCGAGTTAAGGAGACATTCATGTTTTA GAGGTTCGAGTTAAAGAGACTCCACTGCACTTAGAATTAGAACATTTTAA GAATATTTCTTATCTCAAGCCCAGAATAATTTGACGTTCTGATAAAGAAA GCTTATCAAAACAGTTCTTCCAACATTATCAATTCCTAACTTTCTTTTTG ATAGACAAATGAAATGACTTAACTTTTGGAGAGATTTTATCAACCTTATG TAATGTTTGCCTGTCCGTATTTTATCTTTTACAGACATGGATGATNACAA ATGAAATGACTTAACTTTTGGAGAGATTTTATCAACCTTATGTAATGTTT GCCTGTCCGTATTTTATCTTTTACAGACATGGATGATAAAAAATTGATTG GTGACAAAAGCAAGGTAATTTTCCGTCTTTTGATTTCGCTTAAATTCTCT AAAAAAGGGTCATTATAGTTTGCGGCTTTTTTGAAAAATAGATACTGCAG TTGGCATGGCGATTTGATGTAAATGATTTGTCTAAATAAACACTTCGATG AGATTTTAATACCCTTTCAATGTGATTTCACTAGTGATAAACAAGGATCG AATTTCTTTTTCTCATGTTTTTAGGAATATTGCTTACCGACCTGTCAAAG CAAACATCCTGACCTGAAAGGCATAACTCCTGAAACTGTAAGTTATTTAA AAGTCTCATTTTTCACAGTTTATTACACTACAGTAAAGTGATCTATTACT GAGATCAAATTCATAAAAATGTTGTAAGAGACCCTTTTGTCGATTTGGAT AGGGATACATTCATGATATGCGATATGCACCAGTTGCTTTATAGCAAGGG ATAAATTCATGACATAATGATAATAAAGTCTATCTCAGAATAATCTGCAG TGGAGACAAAAAAGGCTTATGATACTTATGATAGAATTAGAATTAAGTAG CGGTTTTGTGCTTGTTGAAAAGATATTCAAGAGTATGCTAAATAGAAAAA ATAGAAAAGATCAGTTTCTTGTAGACTTTAGTACACCTTATGACATCGTT CTCAAATGGCTTGCTGCTTTTTCTCTGTCATAAATTCCAGCCCCAATACA CCTGGATCGTTTTTCAACTTCTTTGTTTTCTTTTTAGTTGACTGATTTGT TGGAGGGAAAATACAATGATGTTATTGGCGAGTTTCACATCATTGACTCG CGTTACCCTTACGAATTCGAAGGTGGACACATCAAGGTACTTATAGTTGT TTTCAAGTACTCTGGTTTGGCTTAAAAGTAAAAAAAAGTATAGAAAGGAG AGAAGAGGAAAATAAGAGTGGTTCTTTCGTCATTCGAAGGTAGCCATGCA CAACAACTATAAGCTCAAGTTGCAGTTTGAATATTGCATATTTTCAGGTT TAGTCACTATAGTACTGTCCTTTTTCCACTTCAGTCTCTTAGTAGTGACG TGAATCTTTTTTTAATCTCTCTTAATCTTAATTTTTTTCTTAATATCAGC TGACTGAGCTTTTTCTCCTCTCCAACCTTCTCGTTTTTGATAAGTGCACT TTGGCTAGTACTCGATGTTTTAAACGGCGCTTTTTATGTACCTAACCGTA ATCTACTTGTGATGAATTTTAGTATATAACGCCTATATCAAAACCTCGTT TTCAGGAGTAAGAGTTCCTCTTTTTTTGATGAAAATGCAATAATATCGGG CCTCTGACAATATTTCAAATATTATGAGAACCTCGTATTGGAACTGGGTT GTAATAATGAATGCTTCTTGTTTCTAGGATGCTCTTAACATCTTCGAGAA ACAAGAACTGGTGAATAGATTTTTGAAGAACCCACCAAAGAGTGATAATG AGAAAAGAACTGTCCTTATTTTCCATTGTGAATTCTCGTCGAAACGTGGT CCTTCTATGTAAGTTTTTAAACTTTATGCCCATTTCTTTTAAACATTTTA TCGACAATTTTACGCCGGCCATAATTAAGCACCAGCATCTTTTACTCTGG CCCTTATTATGCCAAAGCTCATTTTATTCCTTTTTTTCCTAATTTAATTC CGATCGAGACAAAATTTTACGACTCTTCGCTTTTGACATTAATACTGTGA TTTTTCCTTTGCTGAAAATCAGATAATTATGCTTTAAAGACTAATAATTT TCCATGAGGGCTGAAATTTCTCTAAAGGCCCCTCCCACATAAATGAATGA TTTAATTAATGGTACTTAACTACCAACAGTATGGCAAAATTATAGAAAAT GACTAACATTAATTTTTTCTATATTTTTCTGTCATTCAGGTCACGATTTC TTCGTAACAAAGATCGAGATGCTCACCAAGAGAATTACCCAGAACTTTAT TATCCTGAGCTTTATTTACTAGAAGGAGGCTACAAAGAGTTCTACAGTAA CCAACCAGTATGTATCTTTTATCGTTTTTTTCTATAGAGATTTTGTTTGA TATAATATTTAAACCTTACTTAAATATCATGAGTCATTTTCGTTATTCAA TAGAAAGCTGTGCAAAATCTTCAAATAAGTGTTAAGTTTGGGAGGCGTCT TTCACAACCTTTTGTCTGATAATCTAAACAGCAGTAAAGTAAAGTAACCT AGAAACTAATATCTTTTCTCCTATTTTCAGGGATACTGTGAACCTAAAGA ATACCGAGAAATGTTAGATCCTGAATACCAACAACAATTAAAACTTTTTT CAAAAAGATCAAAATCATGGAGTGAAGACAAGTCAAGTTGCCGGAACCGA AGGAGACCAATCCTAAGATATTAAAAAAATCCCAGAACCAGAAAAATCCC GGACACCTCACTTCCCGGGGTGTCCGTTTATAAATATTATAGAATAAATT AAAAAGTCAAGAAATGTTCATATGTAAATATTGCAAAATATTAAACTAAC CCTGAGGCGTATATAGTTATTATTATATTATTGTTGTTATCCTTGTATTA AGTAAGTAGTATATTATAAAAATTGTGACCACTGGCATGTTATCATAACC CAATTTGCTGCTGGAGAAGTTTGACGTTCAGCATTTTTATTACAAAATGA CTGTCCAAAAAGATTTTAAATATTTTTTTTAGGTTTAGTTTTATTTTTCT CTGAAATTTTTATTCGTGTGCTGTATGCAGTGGTAGAATAGAGTTTGTTT TTATTTGAGTTTGTTTGGTTATTTGAAATGGACTGAAAAGGGTTGGCTTG AAGCTGAATGGGTTGGTCATTTCTAATGCGCCGGCGCATATTGTAGAAAA GTAAAGATGACCGACTATATACAAAGCACCCTTTCTCCATTTCAAGACCA AGAAGTTTGTTCGAAATTGTGTTCATCCTGGAAATTCTACTATTATTTTC ATTTTACGGCATAAAAATTATTTTTCTGCCCTAGCAATTTTATTTACCAT TTGATTTTATTTTAATGTTTTATCTTTATAACAAACGAAGATATACTTAT GAATACGAAATATTTCTTAAAACCTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020257TCONS_00020257Clytia hemisphaericatranscript
TCONS_00020256TCONS_00020256Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020257-proteinTCONS_00020257-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000350supercontigsc0000350:494320..501247 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.53 11.75 16.3 15.2 135 100.6 62.43 60.01 44.63 68.64 33.02 30.98 24.03 20.9 13.51 17.36 31.75 26.51 12.92 13.21 22.66 23.58 22.96 23.65 52.14 50.52 22.84 18.5 9.87 10.08