XLOC_011511 (gene) - C. hemisphaerica

Overview
NameXLOC_011511
Unique NameXLOC_011511
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000357:300828..309773+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011511 ID=XLOC_011511|Name=XLOC_011511|organism=Clytia hemisphaerica|type=gene|length=8946bp|location=Sequence derived from alignment at sc0000357:300828..309773+ (Clytia hemisphaerica)
taccctccaaactcttatactttttcgtgggtcacccggtagacTACTTT TCTAAATCATATGAATTACTTATATActcttataaaataacttccattta ttttagaaaaaatgtaggaataaaaaaagaatcaagATATGAGTGGAAAG GAAGATCCTTCAACTAGTTTGGTGCCAACCAAAAATATCAGTTTCAGATC CTTAACAGTTGATACAGACTCAGATATTGACCCACTTGGATCAACTAAAA GCACTCCTGATATAAACTGCTTAGACAAATCAGTTGGAAGAGAAGCATCA TTCTTCATTAGGGGTGGTGGTATAGCAGGAAACAATCTAGCTGGAAAGAA ATCTCATATTCTTTGCACCCCATCACCATCAACGCTGACAAGAAATTTTG GTCAACGGCGTAAAACTATATTAAATACTTTTCAATTATCATCAAGAACT AAGTTCAATGAGAATGATGTTTATCAATTGTATAGACACACAATCAATGA AAAAGGACAAGAGATGTAAGCTTGAGTATTTTTTATTGTGATGGATCTTT TGAGAATTCATATTTTATTGAATCTGTTATACACTTTCATCTGCAACTGT TAGTTACAATATGCTGCTAATGgtggacctaattgccggggggttcgAAG TTGTACCTCTAAAAACCCCTTTGAAAATCAGGTACAGTAATTAaagtaaa tttcaaattagctggcagtaaatttttgattgcgtattatttttgataga tttcgaattagatagcgattttatactttttggaaaggcaatccggagtg gaatattatgcgtataaaatttctctaaaattttattcaaacacaaagat gaaaaacgaaaaagaaaaaaaaataagctTTTTATCTAGCAATGCTATAA ACaccatttttgaacttgagAAACTTCAATCTTTGCCCATGTCAGctgta aaaatctttttcgaaaaaaacaattCAGTCGAAAGATATTGGGCACGAAA GGAGGCTAGGTAGGCTTTTCACcacaaagtgaatttttctctttctttga aaaattttatacgcataatattccactccggattgcctttccaaaaaagt ataaaatcgcTATTTAAttcgaaatctatcaaaagtaatacgCAATTGAA AGTTTACTGCCACCTAATTTGAAATGTACTTTATAtacaaaaaacagcag aaaacaggctgtttagagcaattcagcttatgaaagctgaaaatataaat agaataaatgaaataaaatatgaTATGAAATAAATAAAGGAGGGGgatgt ttatttggaaccttaGAGTACACcaaaaaatgcatgtttttttttttttg ctatcttAAAATTCAACTTATGATAACTTTCACACACAATATTCCAATGT CTAGGTACAGAGCTGCATGGGAAGCTTATGAAGAAGACCGAAATGAAGAT GCACTCAAATGTATCAGAAAAGCGTTGGTTTTGATGCCTGAAGAAGCAGA CTATTTTGTTCTACGTGGTGACATATATCTACAAATGTGTGACTACAAGT CAGCCATTATGGATTACAAGCATGTGTGTATCTTGAGCCCAGACAATGCT GAATACTTGTCAAAACTggcatttatttattatttgcaAGGTCAATGTTA TTATGATGAGGAGTTGTTTCTAGATGCTTTGGAATGTTTTACGAGGGCAG CTGAAATGCAACCTGAAAACTCTGCTTACCATTCAAGAAGGTAAGATATT TTCATATTCACCAGACTCATTTCTTGGTTACCTATATATAGTACTGTTCA TATTTCACTAGGTTATCATAACACCAGACTCATTTCTTGGTTACCTATAT ATAGTACTGTTCACATTTCACTAGGTTATCATAACACCAGACTCATTTCT TGGTTACCTATATATAGTACTGTTCATATTTCACTAGGTTATCATAACAC CAGACTCATTTCTTGGTTACCTATATATAGTACTGTTCATATTTCACTAG GTTATCATAACACCAGACTCATTTCTTGGTTACCTATATATAGTACTGTT CATATTTCACTAGGTTATCATAATCAGGACTCGTAGAAATAGAGAGACCA GTAGGATTCCTTAGGCTTGGCGTGAATTTAGCTTAGAGCCTCCATAGAGA CATTGTTCGTCTTAAGAGATATTtgtaattcgttttttttaagacatGTT ACCTGAGAAATACAATAATTCTAATGTGCAAAAgtctttcttttaaattt tgatattatatttttaaagttttcctCGTTATGTTTTTCAGCATTGCTTG TCTTCTTTCACTAAAACGTCATAAAGATTGTATGAAAATGATCAATGAGA GAATCGATGTTGAAACTGACAACCCTGATTTGCTCATCCTTCGAGCACGT CTGCATTTGCTATTTTCAAATGTAAGAAATCTATCTAAATTATTATGATT CGTAATAATCCCAATGTATGTTTGTTAATGATTCCTTTTAAAGAACTTAA GATTTAAACTATGTACTTGAATAGACAGTTATTTGGATAAAATCAGAAAA CTAGAACACTCAATCTCATCTTCATTATTTGACCAACACATGAAAAGCAT TTATTATACCTCAACAAGAATCTTTATTTAATTATCCACAGCCTACACTA GCATTCTTTGACATCAAAGATGCACTTGAAATGGACCCTGCTAACGAAGA AGCTGATGTAATGAACACAAATCTCGAAACGAGAGCAGAATTCTTCAAAG AGCGTGTATGTTATTCTTTAGCTTTTTATCTTTTGGACTTTTACATGTTT TTTTATAAAAACAAACTATATAAGAACATAAGGCTTTGATGACCAAAATA TTAAGAACAAGTTAAGAACATTTTAAGGCTTCGCGGACTCTAAAACACAA TTTCTTAGGAAAATGGACAAAAAATACTCAAAAATGGTGAAAATAAGAAC ATATTAAGAACatttttaggcttaaaactcaaaaagttaagaatatccga aggcttcaaaatctttggatattcttataaaaaaacttataaGGGGTGAG CCTCTTCTTGAAAATTGCAGAGCTTTTAAGTTGAATAAAGGGTTTTCTAA CATGAAAATTGCAGAGCTTTTAAGTTGAATGGCACAAAGGGTTTTCTAAC AATCTCTGAATTTTAACATAATATGCGTCCACTTCACAAATCTAACAATG ATTCATTTGCAATCACTTTCTTGATATTAGGCAATCAAACTTGACATGGC TGGGAAGACAAAAGAAGCCATTATGAAGATTACCATGGCAACCGATACTA ATCCTGAAGTACTTGAGTATCATATTCTTAGGTAATCATTGATAAGGTTA ACTactttcagctgttttcagaGGGAAAGTGTTTAATAATAGCTTTTTCC AATCGCAGAATTGATTTTTAAATTAGATCCAGAATGAGTTGTTATTTTGT AGTAGTGGCAAGAAATTTGACTTATTAAAAGCCAAATTGTAGGCCCtgtt tgaaaatgatgaaatataaatctacaaagTTAATTTACCCAAAACTAGGT AAAGTCAGAGAAAACTCCCTTTCCAATTTCATTTTACCATTATATTCAAA CCAATAGTTTATTGGTTGcgtcaaaaatctttttacaggtttgtcaagat attgtCAGCATACGGTTAAAGATTTTGTGGTGATTCTTTGTTCATTCGAT GGAGTAAAGTTTGATATATATTTTGGtatataaaactttaaaatcggTCC AATCAATCAATAGTTGTGTCAGAgaaactgaaaattttgaccTACCCAAA ACGAcaaaattcattgaaaacagtGTAGCAAACCCGTTCTCTCTTTTAAT TACCACTTAAATAGTCGAAAAGCCCTAAAACGatcatatttttcaattgc TAACTGTGAAATGGCTGAATTTAGGTCTCTGAAGCTAAAAATTTGCTCAG AAAGCTTAAATTCAcgttaaaagttggaaaattctAGAAAGATAGctaaa acacaaagaaactTAGAAAATCTAATAAAATCTCACTATATCGATACTTA GTTTTTTTAACATAACTTTTCATTGACTTAAccgattttaaagttttata aatcaaaagttaAGTTAAATTTTCCTCTACAGAATAAGAAAAGAATCAAC AAAAAGTCTTCAACCTTATGCTTACAATATTTAGAGAaacctgtttactt tttttgatGCATCCGGTATGAGTTTCTTTTCCATCCTATTTCATGATACC ATGACATACTatgatgtttttttattatttttgttaccAATCGTTAAAAT CAACCACTCTCTTTCCCAGAGCTGGTATGCATCGTcgtaattttgatttc aatgcTTCAGTGGATGACCTGCTTTTGGCGATGGATAAGTGTAACTATGA TGTGAAAAGCCCCATCTTCATCCGAGCACAAAAACAATTGTTGTTGACAT TCAATGATTTCGCTATAGACTGTTTTAGGTAAGTCTATTTCCTCTTTTTG TTGCGTTATAAACAACCTGTATTGATCTAATTTTGTTAAAGTTTTGGGAA ATCGGAGCTTTGAATCATTCAGTGTACTAAAGAGTGTATTCTTGACAAGT CCGTTGTTGTTTGGACTTGCGGTAAGGGCTGAAAAATTACTCGCCCAATG ATGAATTTAGCGAGTGCCTCTTCAAAAACAGGGACGTTTCTTGGCGAGTT AAACTTTTACGATGTTCGGAAAAAAAGAaccctttcaagtgttttgacgc aaatacgacgtcaaaaaatctaatGTTTAGAGCCtttggcgttctaaatc tactTCAATGTGGGGaatggcgttctaaattcaaTTATTTAAAGCCGTTG TATTGGCACTAGTGCAAGCAGgaattataatataaaaaaagggATATTTG TTTTGTGTCAACCTGGGTTTGATTAGACAACACTGACGAATACTTGATtt gtagatttagaacgccatggtcaTGGAAAAGCTCAACAAACCTTGGCAAA GTGCAACAGGCGTTACTGCCTAGAAGAAATTGGCGATGTCtatcgaaatt tttgaattgatttaaaaaatatttttaggaaaGGCTATTACGAAGAAGCA GTTGTTCTATTGGAGAAAGCAATTCAAGGGGAGAAACATGAACCGTTGTT CTATATTAATAGAGGAGGTACgatgtttctttttcaaatggTTTGACTCT CCACTTGGTCGAAAATTAAATTACTGAAACAGGGAACTCTATGATGGGGT GTAGTTGCTTTAAAGTTTTGAACTTGAAgtgattttcttgaaatatgcAA AGAATGGTGACTGATTCTTCTCGGAAAATACCAAACAAAGATAGTGCTTA TTTATTCTACTTTTCTTACAGACTGTTTCTACAAGTTGAACCATTTACAT TTCGCCATGCTGGACTATCAACAGGCCGAGGAGATTGACACCAATAACAA AAGTGTCGCTCTCNAAAAAAGGGATATTTGTTTTGTGTCAACCTGGGTTT GATTAGACAACACTGACGAATACTTAATttgtagatttagaacgccatgg tcaTGGAAAAGCTCAACAAACCTTGGCAAAGTGCAACAGGCGTTACTGCC TAGAAGAAATTGGCGATGTCTATAGAAATTTTtgaattgatttaaaaaat atttttaggaaaGGCTATTACGAAGAAGCAGTTGTTCTATTGGAGAAAGC AATTCAAGGGGAGAAACATGAACCGTTGTTCTATATTAATAGAGGAGGTA CgatgtttctttttcaaatggTTTGACTCTCCACTTGGTCGAAAATTAAA TTACTGAAACAGGGAACTCTATGGTGGGGTGTAGTTGCTTTAAAGTTTTG AACTTGAAgtgattttcttgaaatatgcAAAGAATGGTGACTGATTCTTC TCGGAAAATACCAAACAAAGATAGTGCTTATTTATTCTACTTTTCTTACA GACTGTTTCTACAAGTTGAACCATTTACATTTCGCCATGCTGGACTATCA ACAGGCCGAGGAGATTGACACCAATAACAAAAGTGTCGCTCTCAGGTTAT CTGTCGTCTATAATCAAATGGGTTTGAACGAATATGCTTCACGGAAGTAC TATCGCTCTGAAGATTACTTCTCACTGGCCATTGCGCATGATTGCCGGAA TGCAATCTTCTATTTGTCACGAGCGAGAGCTAGATACATGCAAGAGGTAA CGATGATATACTTTGAAGGATCTTTCCTTTGTAGGAGGCTACTTGCGTGA TTTTTAGTTTAAATCTCGTCGATTGTAAACTAAAATTGTATCGAAGCTGT CCTGACTACTACAAATGTTGTAGCTAAGAAGATAGTCAGATTGTATGAGA TCTTTGTCCCTACTGtaagttttcaaaatatccaAAGTTTTTGTAAGACT CGGAACCACAGAAGGTTAAGGTTTCTGTTGGCTAAAATTCTCTAACCATC TTACTATCCTTTTGAAGGTTGCAAGATAATAAAATTTCACAAGGTGTTTA TTTGAATCAAAAAGGTATCATTTCCATACAATTAAGGAGTGCTCGAGACT AAACCTAACTTATTGCGTCTAAGATTtacttaaattttcttttcattttg ttcTAGAAAGTATCAGAAGCGCAAGTGGATGTGATATCTGGCTTAACATT GGATCCGTCAAATAAAGATTTCCTATCGATTTTTGATCGTTTGTATCCAC GAGAGAAAGTGCAGGATGTTTTTTCATCACCGTTTGGACAACTCGTTCAA AAGGCTCTGGAAGAAGttatcgaagaaaattttcctgGTGAAGGTTTGAG AGCAAAAGGTAATGTAATGTTTTCACTACCCAGCTATTTCCCTACTGATT CTTGAATAGTTTGAACGTTTACCTCATAGTCAAAGCTTGCTATAAGCTGG GATGTTGCTATAGTCTAGCATGATAGACGACTaacttcaaaaaaagaatt ggatAAGGTATAGTCTATGTACAAACTGACATTATACCGTAACAGTTATC GTATCAAAAGTGCAAAAGATCGTGAATTGTTTATCCAAAAAACTCTTTCC ATCGTAGATGTCAGACTGACAAAGAAGAAGAGTTTGCCACAAATCGATAG CGTCAGAGCGGCAGTTTTGGAGAAGATTGCACACTGCATGGAAGACCAAG AATTTCATGTGGAAATCATCAAGGGGAAAAAGAaggtaaagtctgtctca atataatttgcagcggagacaaaaaaggctgtaacttttgatagaactCG AATTAGAAAACGGTTTTGTGCACGtttaaaagataattcagagtggaata ttatcaaaaaagaaaaatctttaaaaaaatgaaaaaaatagatgaaaaat gaagaagaagaaaatcaacttcttatagaataatgctatgatattcattt tttatcagaaattcttcaatcttagaacgtcataaatacgaaaaaaaatt ctaaaaacatttattcagtcaaaaaatatagctTAAAACTTAGCGATGGT CgactttttgctgatttttggtGGTTTTTGAAGTCAATTGTAATAAAACT TTCGACTATTACTTcgatcgaaattttttttcacattgatgatgttctaa gatcaaagaatcactcgtgtgaaaatgatgatTATAGCACagttattgaa gaagttgatgtttttcttcttcattttcaatcttcatttcccgatatttt ttgaggtttttctttttgataatattccactcctgtttgtcttttcaaca agcacacaACCGCTATTTAAGGCCCTTTTTGTCTCTGCTGCAatttatat tgagacagactttaagtcACTTTTCAAATAGTTTGACTTCCtaaagaaaa ttcgaaattcTAAATCAAATCCAAATGTTTGGGGGTATATACCATCACTC ATGGACGCGGTTGCGTTGTGGTACGTAATCGATAGCAAAAAGCGCTCTCG ATATCAGTAAAACAGCAGAAACAGGGAACGAGGAAGttccaaataacaaa atattttacttaGGGTAGAAAAATATCATTAGGAAAGGCAAAaccaacta cacgttttttcataagaataacttctataagaatatcagggtgagatttc agagttaaacaatagaaaaataagaataatgctcacccccAGCCAAAAGA CACTATTCTTACcttccaaaaaaaaactaagAGAGTCTGGCGGATTGTtt atattttgaagattttcaaccccccccccctggttatTAGGGTTCTTTTA TCTTGCTATATCTTATCAACCTTCCATAGCGACATAATTTACCTAAAATT CTGTTAAGGCGTTTTTCACATTATCTCTCTTTTATTATCCAGGTCAATGA GTTGGTGGAAACTGTCATTCAATCGCGAATCGATTTAGACTACGATGGTC CTAAAATTGCCAAAGGTGTCAAACCGAAAAGCAGGACCGTTTCTGCGAAG ACGTGACCGGAACGACGTGGCTCTTTTCAACAGCCTTTGAATACAATGAT GTATTAAGTCATTAAAGCTTTTGACCTGATCCAGCGAAATGCTAGGGTTA TTGTCAGGGCATTGGCATTATCGGAAGGGAATGCctaaattaagggctct gaCCATAGTGAATTTTTCTTAAttgccgtgtttaaaatgtgttttctgac tgatgtaaccaacaaaactatggcatgttatacattttctgttagacaaa ctattcctgaatctgaaaatttaaagattgcattgaaaaaatttgatgaa gaagaaaatgaagacttttgcgaggaagagtatttcaactttgaagagct tagtttcggcgaagaaaaaacatttcgaaaaaattttcgcagtagatggt gtatcttttaccgaacaataaaaatttttgcggaaaatttttgtaaatgc ttctttgtctcgaaatcttcaaaatagtgttttttcatcaattttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020506TCONS_00020506Clytia hemisphaericatranscript
TCONS_00020507TCONS_00020507Clytia hemisphaericatranscript
TCONS_00020508TCONS_00020508Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020506-proteinTCONS_00020506-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000357supercontigsc0000357:300828..309773 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.64 6 5.19 4.48 57.35 43.99 28.36 30.67 22.57 24.57 20.19 19.79 7.57 7.85 6.85 6.43 8.93 8.56 7.02 8.54 10.88 11.3 6.85 7.62 37.75 34.07 8.49 5.88 8.29 7.91