XLOC_011781 (gene) - C. hemisphaerica

Overview
NameXLOC_011781
Unique NameXLOC_011781
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000376:190594..194945-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011781 ID=XLOC_011781|Name=XLOC_011781|organism=Clytia hemisphaerica|type=gene|length=4352bp|location=Sequence derived from alignment at sc0000376:190594..194945- (Clytia hemisphaerica)
TCCCTTTACACTTCTCTGTCTGTAGATATAAAACAAACTAAAAAACTACT
TTTTAATCATCTGTTGGAAGAGGAAGTTTAGTTTCATTACAATGAATTAT
TCTCAAGAACAAAGAAGTTATGATGACAGATTGGAGTATCAATTCTTGCA
AGATCAAGGTTGGTTTTGTGTATCTTTTCTTCGTCCAAGATTTTGAAAAT
CAATTGTTTAATTCACTTCAATTTGACTAAAGCACCTGGATAGGAAGGGT
ACATTGAGATGTAAAACTTAAAATAAATGTTGTTTTAGTTCGCAGGTTAA
CGGCTGTGGTTAGAGAATACCAACGAAGATATCTCCCAATAGAAGAGAGA
ACTGTCGAGGTATTGCATGTGGCTTTGAACCATTTTTAGCATTTTATTAA
GTAATGATTATTTTGAAAGCATTGTTTAACTCTTGTTACTAGAAAAAAAG
AATTCCAAGGAGCTGGGAACATTTTTAATTACAATTTTTAGAGCAAAGTA
GCTGAAGATGTGTTCAAGTATTTTTAAAAATTAATAAAAAATCTCCTGAT
TTTTCATTGTTTTCCAAATCTTTCAGAAGGAGCCTTTAAAAATTATACAC
CCAATTAAAATTTCTAGTATAAGTTAATTTATATAAAGATTTTAAATAGG
GCTAAAACTTGCAAAGATTGGTATTGTGATTTTTAAAACAATACATATTG
CTAAAAGATTCCTTTTCTTTTTCGTGAACTAGGAGAAAATATCAAATCTT
TTTTTTCATGAATATTTGTACACAAGTTGATAAGATAAAAAATTAATATG
TCATTAATTGATTTTTAGGATGCACCTTTAGCTCCATGGATGACAGACCC
AAGGTAAACAGTTAAGATTGTTTTGGATAGTAAGGAAAGTGCCTTTTTTG
AGTAAATCAAGATTTTAATCTGCATTCCACCTTATAAATTTACAATAAGG
TAACTATTGACACACTCGTCCAAAGAGTGTTAAGCAATAGGAAACGATTA
CTCATCTTTATTATAATATTATTCCAAAATCAAACTTGAGAATCATTCAC
TTCAAGTTAGATTGTAAACTGATTTTCTTTGGTGAAAAATGAAATTCTCT
TTAAAATATTTTCTTGATAGCATGTTATCGCCATTGCTCGTGGAATATGA
CAACAATATCAGATCTCTAAAAGAACAAGTCAAGTCTTACAAAGTGAGTA
GCTACTTTTTACTCTTTGTTGTCATTTGAGGTTTAGGCTCTTGATTTGAC
CCAGGGGTTTCGGAACAATCGACTATTTTAACCTCTGACTTATCAATAAC
CCTCCAGATTTTGACATGTCTTCTTTAATAAAGTTCTTTCTTTGTAATTA
TCTTTTTGTGTATTTCCAGGAAGAGTTTGAAAACCTGCAAGGAAAATCCA
AAACAATTGTAGAAGAGAATAACAGGTTACTGTATTATACATATTTTTCA
ATTTCTTATTCTTTACAGTTTCCATTTAAGTGTCTGTTGTAATCATTTGC
TCCCCCTAAGCTGACAAAATGGCCATATATGAAAATTGTTTATCCTATAC
TTCAAANCTAGATTCTGTTGTAATCATTTGCTCCCCCCTGAGCTGACAAA
ATGGCCATATATGCAAATTGTTTATCCTATACTTCAAAATGCTCAAAGTA
TTCTGACTTTGATTGATTTCTGTTTATAGCCAGGCTGAAGCTATGACTCA
GAATTTAAAAAAATTCAAAGAAATCGCGTGTTTTAATTTTTTAGTTTAAA
CGATTTTGGAACTAACCTTGTTTATAATCTTTCATTTACATTTTTATGAC
AGGCTACATCGTGAGCTGCGAACGACAATAGAAAACCAACTAGAAGTCTT
GCAGCAATCAGATGGAATCAACAATAAAACACAAGTGCAGATTGACCAAT
TACAACAGAAAATGAAGCGAATCAGTGATGTAAAACATTTATTGGTTTTT
TACCTTTACTTTTTTCGCCTCAATAGTGAGATAATCTTGATGTACTGATG
TACTGAAAGAGCTTCCATTAAAAATCATATATTTCTATGAAAAGTTGAAA
ATTAACATGTCGGCTCTTGTAGGGAGGTTTGTGTGTTGAGTAATACCGGG
TGCACCAAAAAAAAGTATACAACTTTGTCGAGATATTGTGAGCTTCAGGA
TTTATTTTTTTTTTTATTGTATAGAGGATGCTCTCACTTGAATTTTGAGC
TAATATACATTAAATTTGAAAACGTAGCTCAAAAATTATTTCAAAAAAAC
TGACTTTTTTTTAATGTCGAAATTTCAAAAAACCATCAAAAACAGCGAGC
AAACTTTTCTCTTGACACTTACCTTGTTTACATATAAAAATACCAAAAAA
TGCAACTGTGTTCATCAAAACTCGTCACGGAATTTAAGAATATGGTAAAA
CAAGCTATTCCCATGTAAGATGATATTTTTGGAAAAGCTGAAATTTTTTT
GGAAATCTCCAAGGTTTTGATGTTATGCTATGTGAGAAAATTTTTGAAAA
AATAGATCACCATTCCTCGACTAGTTGTTTAAAGAACTTGGGTCTGCATT
GAGTTTGATGGTTTTGAAAATGTTCATGACGTGCAAATAAGATGGACAAA
CTGTTGGAAAAATATAAGCGGAGAGAAAAAAGAATAAAAGAAACAATGAA
ATAGTTTTTTTGTTATTTTGTCTTATTTATAGCGTGATTGCTGTTTTTAA
TGATTTTTTGAAATTTCGACATGAAAAAAAGTTAGTTTTTTAGAAATAAC
GTTCGAATTGCTTTTTCTAATTTAATGTATAATAGCTCAAAATTCAAGTT
AGAGCATCCTCTATACAATAAAAAAAGGATGAACAAAAAATTTAAATCCT
GAAGCTCACAATATCTCGACAAACCTGTATACTTTTTTTGGTGCACCCGG
TAGAACTGGGGGCAGAGCTGATAGGTTACAAATATTTTAAATTATGTTAA
AAATCTATGCTGTGGGGAAGGTTTTGACCCCTCTTTAAAAATGTTTTTGC
CTGCTGCTCAATAAATTTATTGGGAATTTACATACAAAATTTGTGAAGGT
GGGGGCGTGGGGTACGTTTTTAAAATTTAGCCGAGGGCTATTTTCTTACT
CCCCCTGAAAATGCTGGAGGTTTAAATAGGGCAAATGTGCTGACTATCCT
GCTAGTGGTGGATCAGGGGGGGTCAACATCCAGATACCAGACCCATAGCC
GGGTGGTGGTGTCTTTTTTTCCTTTAAAAGTCTGAAAAGTCAATTGGTAT
TGATGGGGTGGGTCCCCCTTTTTTTAGAAAAAGAGTTATCCTCAGTTGGT
ATTGATACCAAAATAGGGGGTGGGTACCCCTTTTTTTAAATAATATGATT
CAGAAAGTTGGTATCCATATCAAAATGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTATT
GGTACTAAATTAGGGGGTGGGTCCCATGATATTTTGTCAAATTCAAAAAG
TCATGTTGGTATCGATACCAAATTAAGGGGGTGGGTCCCCCATTTTTCTG
AAAATTATGATTTTCAAGTTGGTATCGATACCAAAATAAGGGGGTGGGTC
CCCCCTTTTTCTGAAAATTATGATTTTCAATTTGGAATCGATACCAATTT
TGGGGTGGTGGTGTTAACTTAGCTCAAAAGGTCAAAAGTCAGGTTTTTGG
GCTATGGGTTGGTATTATAAATGTTGACCCCCCCCCCTGGGTGGATAACA
GACAAACATAATAGACTTTTGTGTCGATTTTAGCAAACTTTCATCTCTTT
TTTTACAGGAAAAAGAAAGAATTGCTGCAAATTTCGAAGAATGTAACAGG
GA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021010TCONS_00021010Clytia hemisphaericatranscript
TCONS_00021009TCONS_00021009Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021010-proteinTCONS_00021010-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000376supercontigsc0000376:190594..194945 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.63	7.28	7.16	5.42	31.1	21.96	15.61	21.52	6.82	11.68	8.2	7.93	5.32	5.49	4.82	8.4	6.75	8.3	5.06	4.7	4.25	3.85	6.88	9.73	25.05	19.09	4.39	3.51	6.54	7.81