XLOC_011841 (gene) - C. hemisphaerica

Overview
NameXLOC_011841
Unique NameXLOC_011841
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000378:273296..279332-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011841 ID=XLOC_011841|Name=XLOC_011841|organism=Clytia hemisphaerica|type=gene|length=6037bp|location=Sequence derived from alignment at sc0000378:273296..279332- (Clytia hemisphaerica)
GTCGAAAACAAGAAACCTGACGGAAATGAAAACAAGAACAAACGAAAATT GACTGATTTAAATGATTCAAAAAAGAATAAGAAGAAAAAAACATTCCACG AAGAACTACTTGATGTTCAGAGAGAACAAATTGATTTTTTCAAATCTTCC GAACAAAACTACACAAAATTCATGAGAGAGTTGGTGGAAAACCAACAAAA ACATGACGCAGAAGAAAAAAAACGCGATAGAGATTTTTTCTTACAGTTAG GAAACATTTTATCTGGTGGTCCTGGTGGTCAAAATCAAAAGTGAAAATAT TTTGGTAACACTTGTCTTATGTTTTTTTTCTAGAAAATTTAAAAGTTGAA ACATTATACTGTTTTTAACGGTTTTTAGTTAATATTTTAACATTTCACTC TCATTGAACACTACATGAAAAGTACTACTCGTTTTGTTCTAAATATATTT TCAATATTGTTCTTGTTTCTTCTCCCAGCGGATAAATGTCTTGGTTAACT CGTCGTTGTTGCCTTGCTCGCCTCTCGTTTCTCAGTATGTTATCTAACAT TCCATCTTCATCGATGTATTCGTCATTCATTTCTTGACAAATATTGTGTA AAACGCAGCAAGCGATAATCTGATCAGAAACATTTTCGACTTCAGCGTCA AGGCGCGTTAGTAAACATCTCCACCGAGCCTTTAAAATACCAAATCCCCT TTCCACCGTGACTCTAGCAGAGCTGAGTATTTTGTTAAACCGTTTTTCTG ACCTCGTTAAAGCGGGAATAAAAGGATAGGGTTTGACTAGCCATGGAACC AGAGGGTAAGCTCCATCTCCCAGTAAAAGTGGTCGTATAGTGTTGTTATC AATCCGTTTAGTAGGATCAGTTAGAATTTCCAAGCGTTCTGCTTTTCGAA ATAGCGACGTATGAGCTAACACTCGGGCGTCATGTATACTCCCTGGGAAC CCAGTTGCGACATCTAGGATCTTTAGATTTCCACCAACAACTGCTTGAGT GTTGATTGTATAGCATTGCTTACGGCTGTAGTAATCTCCCTTATGTTCGC TTGCTGGTGCAGTTATTTTGATATGCGTTCCATCAATTGCCCCTACCACT TGTGGAATTTTACAGTTTGTTTCCTCTTTGAATCGTCCTATTTCTTCTCT AGTTTCATCTCTTGTAACTGGGAAATGGATAACCTGACCCGAAATCCTCG AAAGTTCCTTGTAAAAATCCCTCGTAATTGAAACAGCAGTAGACTTTGCA ACACCAAAAGTTTTTCCGACTGTTCTATATGCATTTCCCGTCGCTAACCT CCATAATCCAATCGCAATCCTTTTTTCAATCGGTACAGCCCTGCGAAGTT GCGTGTCTTGCTTTGCTAACCTTGGACTCATCAATCTTACAAGCATTTCA AAAGTTTCCTTTTTGATTCGGAAATCTTGTCGCCATTGGCTATGACGGAC ATTATTATCAATTTCATCTCTTCTATCCCATAGATCAGTAAACCAAAATT CGTGTCTTTCAAGGGCCCAAATCTTTCGCTCGTTGCGAGCCAGAAACGGG CGGTTCATCATCAAAGCTAATCTCTTCATTCGTTTGTAATGCAGCATATT AAGAAGTGTAAAAGTACGAAATCGTTTGATTCGTTCCCATTTTTTGCGAA GAAAATGTTTGAAAATTATGAAAATTAATAAACGTCTTGCGCTCATGTTT ACGTCCCTTTAATGATTAGACTGCTTGATTTTTCTCTTTTGAACTTTGCC GAAAATTGAGTTTTAAATTTAAAGTCAGACAGCGTTAAATTTGTCTAGTC TGACCGCACTGTAATAGATTAAGTTATTCGATTAACACTTATTAACAGTT ATTTTGTTTGACTTCTCGGAGAAGGGGGCTTTAAATTTGTATGCGATAAT GCCTCGTTCTTTTCTTATAAAGAAAACCAATTTACGTTTTTCTTCGGTGA CTTGTACAGACAAACGCGGCACAATTTTACCACTTGACGATCTGGAACAG AAAGAAGTATTTATAACAGGTAAGCGGAAATTTGTTAAGCGGGATAGGGG GACTAATCACGCCTTTAAACTGAAACACTCGGCCAAACTATTGTGGAGCC CTAGAAGGAACTTGCAAAAATATTTCCCCAAATATATATATAGATGAGAT TAGTAAGTTGAATGAATGAATTGATTGGTTTCAAAAGAATTTCTCGGAAG ATAGAATTTATCGTCTATTTTCGTTTCTTCCAGAAAAAGAGCAACGCCTC ATTGAGGAGGACGAAGATGAAAAGTCTTATTCAACTATCTCGATGTGTCG AACGCCTATCCCGCCCTATTATTTGAAAAAAATCGAGGAGGGTGGAGAAG AACAAAAAGAAAGGATGGAAGACAAGCATAACGTTCGAGCGTCCGAACAA GGTCGCCCGTCACCCGACTCACCACATTCCAGACACTTTCCGCCACCGCA AGAATACACATTTCTTCCGATCAAACATATGGGCCACCGTGATCATGAAG TCCCATCTCGATATGGTGAGTCTATGTTTCTGACCGCATTCTTCATGACC CCCGGAATCGAATTAAGGGGGCCATAAAGATATGTCGCCAACCATGGTTG GGCGACGAAGAAAATTTTCGACTTTTCACCCTTTTCACCCCCGGTGACGG GGGACATGATCTTGCTGTCTTTTTACTAAAATTTATTAAGGTTGTATTTA TAGTATGCCATATTGGAAAAAAAAGATTTCAAATCTATTCTTTAGCCGTG CAGTAAATTTTCTCACCAAATTGTACACTGTTTTGTTCAAGATATGCAAA AATATATTTTCCTGAAGATGTTTATCTCAAAAAATGTTGAAATGGATTTT AAGATTTTCACATCTGGTACCTTTAAGATGACATTAAACTGAAATCATTT TCTTGATTTTTGGCATAGATAAAGTTAACAGAACTTTGGATTAAAGTTTT CAAATTTGAAAGGAAAAAATAGATTGTGGAATGACGAATGAAGTAAAATT TTGAGTACTTTAAGGAATTAAGTCCTGTCATAAAATATGGCAAAGTAAAT ATTTTTTGCAAAATTTAAGTTCTTTTTTTAGTTTCTGTGGTTTCATTTTT TTTTTTTTTCTGCAGAGAAGCGATAATTTACCCTACGATTTTGGTATTTT TGCATTTCTATCCTTTTGAATTTGTGAAATTACTACAAATGTGAGAAAGT ATGACCATTCACAATACAATGAAATTAGATTTTTCGGGTACTGTGCTGTT CTTCGTAGTTTCTGCGGAAAAACTTTAATTCAAAAATCGGCGAAATTATT TTTGCATGCATTTTTTTCTTTTTTTTCGGACACACTGTATAGTATAGAAA TCAAATGTGATTAAATTTCATTTCATTTTAATTTTCTAAAAAAAAGTAAA TCTCCTTTTGACAAATTTCTGTTGTAAATCTTGTCTTATAACTTTTTGAT TTTCACAGTTAGTTACAGCTAAGATCCGGTTCCCCTTTTCTTGTGAGATT TTATGATCTTTTTCTCCTCAGTTGGCCACTTTTTGCAACTACACGCTTTT CATTATCTTTTTATAAGAATGGTGTAAATCCGCTTCATCAGGAATATTCT TAACTTTTTTGGGAAGATCATCCTAAAATATTCTTACAGTATTCTTTAGG TTAGGATCCTAATTCAGGCTAGACTTAAAATACTAATGTACTACATATGT ACTAAATACATAGGTCTCAAGCATAAAATCGCATTTTTGTGAAAGGGGTG AAAATGCTCTAAAAATGGCATTCTTTTAAGCTTGAGTAGCAAAATTCCAT GATGGTGATATTCTTAATTTTTTGGCCATTTTCATCATGGACATTCTTAT AAAGTGTATTTTTATAAAAAAAGCGTGTAGTTGAAATAGTATTCCTTTTC TAGATAACACTCCGTCTAAGAAGTCGTTTTTTATTTGAAGGATTTCTTTC ATTTAGAAATAGAATTATAAATCACCATGAAATACCTACAAGAGGTCAAA CCTGTGCAAAGAAAAACAAAACAATAAAATGAAACGAAATTAAAAGACAA TGAAAATACAATTTGATCATATACAATTTTTTTCCCGATTCTTCAAAAAC GGGGTACTTTGAAATCGAAGAGAGAAAATATGAACCTTTTTTCCCCTGAA ATTTTTATTATTTACTCAGATCTCAGCAGGGTTGACATGGATTCCTTACT ATCAAACCTGCACTTTATTAAACCTATTTCTTTTACTTTTTCCATTTGCG AAAAACTTATTTTTCACAGTTGATAGAGATTTTGTAAAAAACCGATTGCA TTTTTTTATTTCAAATGATTTTCTTGATAACCTCGCAATGACACCTTGTT TCCTTCCCATGAACCTTGCTAGGGTAACGGAAGCATTTACTTTACGAAGA TCATCTCCCGCTCAAAAATAAACTGGGAGCCAGTTTTCTCTATATGCCCC AAGACCTTGTTAGCTTTAATTTCTTTGAATGGCGGCTTTTAACTCTCTAA AGTGGGCCTAGTATGGAAACATTGGAAGGCTGTAAATAGGGGATGTTCTG TTTTAAGATAATTATCTATGCGTGACTGAGTAGTCAAAACAGAGTTTCTG CATTCGATCAAAAATATATATTTAATTATTTTCATAAGGTGTAGCTTCGA CTATCACTCAGATCTATAACATTCCTCCGTGTGCAGCTAGCTGTTAGCCC ATTCATAGAACTATAAAGTCATTTCTATTTATCTTTCAATCCAGGCTCGA GAACACCAGAATATTTCCTACCGCCAAACAATGGACCAATTAGCCACCAC TCTTATGATCGATTCGCCTCTTATTTCCCATCGCCGCACAGCCCCGAAGC CATCAATAACAAACATCATAAAATTCCTATCCGTCATTTATATTTTAAAA ACCCGCCACCGCGCTGGAGCCCTAATGAATATGATGGCCGCCTTGTTGAA TCACCCAATTCACAGATAGGATTTTGGCGACAATTACATCCTTTAAACTA CAGCCATCAGCCATCAATGGATATTGAAAATCCAACCAAAGTGAAATCAC AAGACGGAGACAGATACGGCTGCTCACAATGCGATAAAGCTTTTAACACC GTACACGGGCTAGAAGTTCACGTTCGGCGCTCACACGCCGGTAAGGTGCG GCCCCATCGTTGCGACTTATGCGGGAAAACGTTCGGTCATAAAATCAGCT TAGAGCAACACAAGGAGACAATTCATTCTGCTTTCCGTAGTTTCGATTGT ACCGAATGCGGGAAATCATTCAAGCGCTCTTCAACGCTTTCAACTCACAT GCTTATCCACAGTAACACTCGCCCTTATTCTTGCGGTTATTGCGGAAAAC GATTTCACCAGAAATCGGATATGAAAAAACATACCTACGTTCATACGGGG GAACGTCCTTACAAATGTGGAGCTTGTAATAAATCATTCAGTCAATCTTC AAACTTGATCACTCACATGCGAAAGCATAGTGGTTTTAAACCATTTCATT GTGATTTATGCTCAAGAGAATTTTACAGGAAAGTTGATCTACGACGCCAC TTGTTCATTCATCATAAAGACTTTATTGTCAGTAGAAATGCTACTGGAAT AGTAGGCAACGAAAAACTTGTTCGATAGGGGAACTTATTTCGCAAAGAAT CAATTTGCCGAATTTCGCCAGAAATAATAAATTACCGACTCGTCCAAATA TGTTCCTCTCTAATTTTGAATATTGTTAAGATTATTTCTCGTTATATTTT CTCGGAGGGGGGAGGTTGGGAGTGGGCTATTTGAGGAAAGTTGATGAACC TTAAAATCTTAAAAGTAACGAGTAACTTATTATATGATAATTTAATACGG ATAAAAAACATACTCTGCTATTTATGGAATTTGGGAATTTTTTAACTAAA ATGTATCATCGTGCAAGGGAATCCCCAAAAAACTCTGAAATAAATATAAT GAAGTACTAAAGGTTTTTTTTTGGTAATGGGGAAATTGGGAATTTAGAAA AAATAAGAACTCTTTCATTTTTGTATGAAATTATTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021140TCONS_00021140Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021140-proteinTCONS_00021140-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000378supercontigsc0000378:273296..279332 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.41 0.33 0.22 0.16 0.64 0.63 0.77 0.88 0.26 0.37 0.47 0.35 0.72 0.52 0.83 1.74 2.55 2.38 0.31 0.26 2.03 2.16 1.1 1.02 1.18 1.68 1.24 1.39 0.58 0.36