XLOC_012178 (gene) - C. hemisphaerica

Overview
NameXLOC_012178
Unique NameXLOC_012178
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000393:177012..183309+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012178 ID=XLOC_012178|Name=XLOC_012178|organism=Clytia hemisphaerica|type=gene|length=6298bp|location=Sequence derived from alignment at sc0000393:177012..183309+ (Clytia hemisphaerica)
CATGTCCAAATAAGGGATGCTATGAATTAATCGAAAAATCGCAGGTAAGA AGAttcagaccatgttcacacgttacccTTCCTTTTcactccggtatgat tttcgttacggatcgagtttgttcatattggtttcggaacgtttcggagc aagaaaacggagcagttccgttccgatgaaaaaagtggagtgAAACCTTT TCAATctattttgctttgtaacgtcttcttttttgacgtttcgaattttg acgttcacacttgtttcggaaccgtcgTCTGAACATCGTCTCAATATACT CTAAATTTTCTCATGCTGGACAATCACTGTTCAACTACCTTAAATACCGC CATTGTTTCTCTAATTACGCCTTATCCGCCCTCggttttgtcaatttttt attgCTCTTCTGTGGCATTATTCTAAACTGCATTCGCTTTAAGTGTTGAA TAACCCTTGTTGTGCATgccatttttcaaacaaatgcTTCAGTATCTAAC TAATCTCCACGTTCCgtcatacagggtgtccctaattaaagtatcgagtt tgaacatgcgattgagtagaaaagtttgtatGTGTTATCGctctaaaata taagaacgttctccatcacacaggcttattacaaaaggtagttacaacgt ataaattaatcgtaatgacaaagaaaaaagagggagagcttaaaatacaa ttttgtgaacacgcacataaaactttctactcgtagttgtgtttcgactc gatactttaattagggacaccctgtataagcaaattctttttaaaaaact ttaaagaagTCCCTCCAGACATATCAGATGTCTCTCTTGACAATAATTCA TAGTTTTACGATTGTATCACTTTTTTACGACTCTTAAATcagcattttac caattttgtaACGTATGTTTTCACACagcttttataattttttagttACA TCTGATGATTGCTTACTGAGCATGAAACTCGGAAACTCTGAAAAAAGtac acacttaaagcgaatgcACTTTTGATTCCTTCCTCTCTACCTCTCGtcat aagttttacctcagttTTACCTGCGCtaattattttttgtattttcttta gTTACAACATCACGCAGAATATTCATGcaaaacaaatttaattttgtgTC GGTGGCGACAATATGGCtgcttggaagaggtatttgtCAAACGATACATT TTATCAAGGAAAACCttgagggaactaattttggcgtaACTAATTTTCGC ATTTTTGGGTGTCGACACCCACTTTTTGCcgaaattctttcatattccta gggtttttttagtaaaaaactGCATTTTGcggaaaaaactttcgcgtttt tgggtgtctaccgTTCATGGGCTATATGACGTCAAAATGCAATCGGTCAT TCCAACGGCATCTGAGAATTGACTtcagcgagattatgtatctagaattc tctacggctacagTTAAAgcggcgagggaaatggcgagtaaggcaagcaa tggcgggtgaaagcaagttcgatatttgacgtacgacattatgtcaactt tgcttatacggtattttggtgtttttcccgtacagagcaaagtagacaac gacatgttgCCTTTGGCGACGACCCGCATGGGCAGCCCCGCAActgtagc cgtagaatatctccgatacataatctcgctattatAAATTCCAGGTATAC TCGAATCTTATGCGTTCATTGTTTTCTAGCTTCCTCGTCCCGAAATGGTG GTCCATCAGGCGGAATGTGAAGTAACTCAAATAGATTACGTCATTATTGA TCATTATAAAGAAATTATCTCCATGAAGCAAGAGGCAAATAAACTGAACC AAAAGAAGTTAAATGAAATTACGCCAAAacataaagaattaaaattgaaa GCTGAACAATTAAGAGCAGAATGGGAGAAATTTCACCAAAGGTTTGATAT GAAATACTATTTTACCCTACCAGAAAAATGATTACTCAGCATTTATGATA GTGCAGTGGAGAAAAATTTAGATATTCGGCCGAAATTTTGGCAGCAATCC GTTCTTTGTCATTTACCCAAAGTTATACACTTACCCTCGACTTTGTTTTG CCCTGTAGAGGACTCAAACGCTTGGATCtatatgttttcaaaaaaatcta tatGAACTTCCAAAAGACGCATATTTGTGTATATaccacaggaaaaaatc ttcaaatcccaATGTTTGGGAAATACGTATTTCCAGATCCGGAAAATGAT GTATTTCCCAAACCAGCCCCAAACTTGGGATTATGCAGCTTGTACGTAGG TTGTGAATTCCAATATCACAAAGCTTAAAACCAGATCTGGAATAGGGTTG GGAAACTAGGTTTCCCAAACTTGTTAAAGTTTAGTTCACATTACGGAAAA TGGCTATTAACAATGCTGAACACAAAGATTGAGTTTGTGATTCTGTATAA CACAATTGGGAAACTCAAATACCCAAATATGATTTGTAAATAAATGTATT CGATTATTCGTGAGCATTGGCTCGATAGCTCCCATTCGTTCTGTCATGTA CTTgtgctactttgagaatcccggcactttgTCACAACAGCGGAACAACG ACGTGGTACCGATTGAACGGCCGCACGGCGACTGACGATTCCACTGAGCC CTTGTGACGCAAGTCAATTGCGAACGGACGAGGCCGCCCTTGCGGAACGC ATCACCTTTagcgttgtgttacacactgatcgaatACACAAGTTATGATC TGAACAGTTTTGACCCAATTTCtacttttggtttttcttaCGCATGCGTG GTACTAGTTTGGGAAATTGATTTTCACAAATGTGAAATCGATATTTCCCA ATTTAAACTTTCTAGGTGAAATAATGTCAGATTCTTTGTACTTgaggttt tagaaaaaaagttttaaatgttttaaaaggGTTTAATTAAAGTTAACCCC GAAATCACAAGTTTGGGAAATTGCGAATCCCAAACTTATCTAATTTTGAG TTTTCCAGTACcaagtttttgattttataacaAAGTCTAGATATATATAT CACAAGCTTGGGAACGGCATTATCCCAAACCTAGTTGGTTGTTTTAGCTT TAAGTTTGTTATATAAGTTTTCCACAttgtgattttgattttcccaaGGC ATGTCTAATTTAACTTAAACTCAAATGCCAATCGTGAAATGCAATATCCC GAACGTCGTAGAATCCCAAACTAAAAATTACAAAGTGAACATGATGTGAA AATTTCCAGATACGTAAACTGAAATTCCCAAATTTGGGAATcgatgattt tttcctgtgtactGGGTTAAGATACTGAGTACCAAACTATATACCACAAA CTATAGGggggttcatggttggcggaggagcagaatcaattttagtgcgg aatcaatttttccgaaaaaatggACTTTTGCAAAAAGTTTCGCGGAATTA CGGAATTTGCagaaaatactcaaaatttccggaaattttgacgaaaacca tgaatttcaaaggaattttctgCGGTGGAATttcggaatcgggtaccccc taaACACCCTCCCCCTCATCACCTTATAACAAAAATCagcttttaaaaag aatttgcgCCCCGAAAAGGTTAAGCTGTCCTTAAATACATATCTATAGCT ATATAATATCTACTATTCCATTCGATACTTTGTATTTTTCCTCCAAACGT GTACTGTTAGATCAATTTTCATATCTTTCATTTGTATGGATTTGAATTTT AGTGAAAGCATGGTGACTACGAGTGATGGACGTTTGAGACTTGTCAATTT CCAAGGTAAGTAAGTATCCACATAGAACGTCCAAACAACATCCATATGAC ATCCATAACCTACGTATGGAAATAAAGTTGGATTTTATTCAACCAATGGT GCGTGCTATCCTAAAATATGTCCTCGAACCTTAAAGGGAAATCTGAATCT GGGAAATTATTAGGTCATTTTTAGGTAAGTAATTAACTGCAAGTCATTGG GCTAGTTTTCGTTAATgaaaagttttaagttttaTCCAACTAAGTATTTT CCTTTGAGGGGTAGGCTCATAAATCTGAAATAGAATTTCGACTATAAACA GTGGATAAAACACCTTGCCTGGTGACGATGAAAGAAGAGTTCCTCGAAAT TAGCGCAATATCCTGCTCCAGGCTACAAAACATTTCACTATGAATTTCTC TGTTTATCAAACTTCCAAATTCTAGATCTTCTAATGTTAATCCAAGAAAA TGATATAATCAATTTCATGCAATATACAAGTCAATCATACCGTCTGGTTG AGCTACTCGATGAAAACGGGGACACCCTTNtgattttttcctgtgtactG GGTTAAGATACTGAGTACCAAACTATATACCACAAACTATAGGggggttc atggttggcggaggagcagaatcaattttagtgcggaatcaatttttccg aaaaaatggACTTTTGCAAAAAGTTTCGCGGAATTACGGAATTTGCagaa aatactcaaaatttccggaaattttgacgaaaaccatgaatttcaaagga attttctgCGGTGGAATttcggaatcgggtaccccctaaACACCCTCCCC CTCATCACCTTATAACAAAAATCagcttttaaaaagaatttgcgCCCCGA AAAGGTTAAGCTGTCCTTAAATACATATCTATAGCTATATAATATCTACT ATTCCATTCGATACTTTGTATTTTTCCTCCAAACGTGTACTGTTAGATCA ATTTTCATATCTTTCATTTGTATGGATTTGAATTTTAGTGAAAGCATGGT GACTACGAGTGATGGACGTTTGAGACTTGTCAATTTCCAAGGTAAGTAAG TATCCACATAGAACGTCCAAACAACATCCATATGACATCCATAACCTACG TATGGAAATAAAGTTGGATTTTATTCAACCAATGGTGCGTGCTATCCTAA AATATGTCCTCGAACCTTAAAGGGAAATCTGAATCTGGGAAATTATTAGG TCATTTTTAGGTAAGTAATTAACTGCAAGTCATTGGGCTAGTTTTCGTTA ATgaaaagttttaagttttaTCTGACTAAGTATTCCCTTTAAGGTAGGCT TATCGATCTGAAATAGAATCTCGACTATAAACAGTGAATAAAACACATTC CAAAAAAATTCCAATATGAATTTCTCTGTTTCTCAAACTTCCAAATTCTA GATCTTCTAATGTTAATCCAAGAAAATGATATAATCAATTTCATGCAATA TACAAGTCAATCATACCGTCTGGTTGAGCTACTCGATGAAAACGGGGACA CCCTTTTACACCATGCCACCCGTTACAAACGCCCTGATTTCGTCTTATGG CTTATACAGTTTTCCGGACAATACACACAGTGCAAGCCAAATGTTAAAGA CCATGATGGTCAAAATTCAGCCCAAATTGCAGTTACTGTAGACTGTATAC CAGTTTTACAAGTTCTCTTAGATAATCAACCAGAGCTTCTTAATGAGGAT AGAACGAGCCATGGTTCAACATTACTGCATATGGCTATCGATCTTGGTTT TGAGGAAATGGCCAAATATATATGTTCAAGAGTTGATGTTGATGTGAATG TGAAAGATATCTTCTCAAAGAAGCCAGATGATTTAAAAGAAGTCAGTAAG GATGTTAAACGAATGATTAAAAATCACCGATAAAATGATCACTGAAAAAA GTGATCGTGGGTATAGCAAGCTATCCAATCGTGGATTGTGAAATCTGTCT ACAGTGAAAACGATAAAGACTGAGAACGCCAACAGGCTTCAAAACCTTTT GNTATCACTGAAAAAAGTGATGGTGGGTAGAACAAGCTATTTTATCCAAT CGTGGATTGTGAAATCTGTCTACAGTGATTACGATAAAGACTGAGAACGT CAACAGGCTTCAAAACCTTTTGACGTTCTCATAACAACGTGTTTCCACAA GGCATGTACAtagattttaaattattttatgaATATGAATGATTTTCTAT AGTTAAgtatgtaaaaatatttttgtaatcaatATTCAAATATTGGGTAG AGAATTATACCCTATAGCTAGCTAATCTCTAAGGTAGGTACTTTAAGGTT TTAAAAGGAGGGTGGTCAATCTTGTTAACGAagcagtttttatttttgtg actGTGTCTTTATCCCCGGGGGAGGCACtttggcaaaattgggtacgggg acgtgccgctattcagggtcccttttttaggttCTGAAGATATCTAACAG GGTCCCAAATCTACTAATTTACAAGATGTGAAGCTGACAGGATCGACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021705TCONS_00021705Clytia hemisphaericatranscript
TCONS_00021706TCONS_00021706Clytia hemisphaericatranscript
TCONS_00021707TCONS_00021707Clytia hemisphaericatranscript
TCONS_00021708TCONS_00021708Clytia hemisphaericatranscript
TCONS_00021709TCONS_00021709Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021706-proteinTCONS_00021706-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:177012..183309 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.23 18.55 31.28 31.61 3.94 3.14 17.11 15.5 12.09 11.63 9.23 7.36 10.35 9.82 4.97 5.43 24.52 52.17 19.48 17.95 15.61 16.84 22.82 22.99 10.06 10.56 6.33 6.63 9.32 11.58