XLOC_012188 (gene) - C. hemisphaerica

Overview
NameXLOC_012188
Unique NameXLOC_012188
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000393:95547..104758-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012188 ID=XLOC_012188|Name=XLOC_012188|organism=Clytia hemisphaerica|type=gene|length=9212bp|location=Sequence derived from alignment at sc0000393:95547..104758- (Clytia hemisphaerica)
CACGGGACGCTCAAAATTGAAAATCGATACAAATTAATTTTCAAAATACA
GTTCATACTTCATTGTGTTACCAAGGTGACCAATAATATCCAATTGAAAT
CTCTTTAATATCCCATTTATTGAAAACTGATTTGAAAAAAATATATATGT
TTTTTTTCGACACGGAATTATTTTTTTTGGTACTTTTTTATCATTCTAAG
GATGCAGGATAGATATACGATAATGTTTATTTTGAAGAAATATTTTATTG
TTATTTTGCTTCTTGAAAGCAAAACTTTTGGTGTTCGTGCACATCAGCAT
GATTATAAGTATGATCGAACCTATCGAGATAAGCGATCAACATTGCATAC
ATATTTAAAGTTGAAAAATTTAAATGAACTTGGGTGCATTTTGGCTTGTT
CGAATGACTTTGAATGTGGCTCAATTAACTATAATAAAGAATTAAAGTTC
TGTGAGCTGAACGAAATTCAAAAAGATAACGACCAGCATACTGAATTATT
GAAGATCGATAAAGGATGGAATCATTTTATTAAACGCAAGGTATCTTTGC
TAATTCCAGTTTTGATTATTTTAAGGGGGTCTGACCTCGACGGCTAACGG
CGGAGTCAAAAAATGCAACCGTCTGTAGTAGTGTTCTCAGTGTTGTCGGA
AAATTTGTGTAGGAGAGTACAATTTTTGTTACGAAGTAATTATCTTTTAA
ATGTTATGAATAGATTATTACTTTGTCACAAAAATCTGCTCTCCTACACA
GACTTTCTGACACCCCCGAGAATGCTACTGTCGATTTAAGAACAATCCCC
CCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTGAGGATCCAAAAGT
TCAAAAATAGTCCAATAAGGCTCAGAATATAGCCTGGAAGTCTGCCAACT
CCTCCCAAATTGAAATATTCGATTAAATTAAAGAAGATAGCCCAAAATCG
ACTTTCTCGCCGGAAATTTAAATCTTGAAAAACCTTAAAATAACCAAAAT
TCTCAATATATTTCAACCATGCTTGCATAACTTTTTTCAATTTTCACCCT
GAAATGTGAGTTGGAGTTTACTGGTAATGATATTTTATCACACCAATTAG
TTTATGATATTCTATTCGTTTTATTTTCAGTCAAGTCCTGCTATCACTCC
AGTTTCCCAAGAATTCTCCATTCCAGGGGGTAAGTAAAACTTTGATTGGA
TACCAGTTTTGTCAACAGACAAATTACGTTTATGGGAAGCTCTGTGTCGA
TTGGGCCTGAATGAATTTGAATGAATAAAAGGTTTCTAGAACCATGTCAA
ATTTTTGGCTCAAAGGGAAATGGTGCTGCTTTCCAATGAAAAGAGGTCAA
TCAACTTGCAAGTTTGCTCTGAGGATTTGTACGCAAGAAAAATAAATAGC
CCAGCTGCCATAAAGCGTTGTTTCAACGTTCATCTAACGTTATATGGATG
TTGTGAACATCAGATAAACGTTGAAATAACGTTGTGTGCCAGCCAGCTGG
GAGAGAACAGTTTTAAAAAGAAATGAGTTGTTCGCTTTGCCACCGTCTTG
AGTACTGCAAAACACCCGGTTAAAATGAAACTTTAACGAGTACAGTTGGG
GGGGGGGGGACAGAGGCAGGGGACTAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGTA
CAGAGGCAGGGTACTAACCCATAGGGTACTAACTTGATTTTTCACTCAAT
TTCTTTTTAGTACCGGGTACTACTTCATTTCTGCTGTAAAAAAAGACACC
ACCCCCTAAAATCTTATATTTTACAGATTAGACCAAAAGAGAGGGTACTA
TGTTAGTTTTTCTGACTGAAATGGAGAGATAATTCAAACAAACTATCATT
GATTAAGTCAGAGGCTTTTGTCCTTTGATTTTAATAACACACTTCTTGAC
AATTTCGGAAGTTTTGTCTTCACAAAAATCAAAAAATTTCTCAAAAGAGT
AAAAAAAAGTTTCTCAATTAAAAAAAATTTTAAATCAAAAAAATAATATT
TGAAAAAAGTCAAAATATTACAAAAGACTCCTTTTTTTATTAAAAAAGGA
GCAAAGCTCTGTGAAAAAGTACCCAAATAGTACCCTGTACTTGCTAGAAG
AGTGAAAATACACACCCCCACCCCTAAAGTAGTACCGGGTACTAACTTTT
TTGAAATGCAAAAATAGACACCACCACCCGGCTATGGGTTAGTACTCTGC
CTTTGTACCCCCCCCTGACGAGTACATTCTTTTTTTAATAAGCATACATG
AAAATCGGGTCGAGGCTCAATATGCTTCTCAAAATCTCATTTTCAGTCTT
AATTTATGCTTATTTATATGCTTAGACTTCGATTTATATGCTTAGCATTA
AGCTAATTTTTTGCCGAATTTGATTGAAGTATGCTTAATACTAGTAATCG
TATGGTTTGGAGTGCAATTAACGATTAATCACGAGTAACAAAGGAGAAAA
GAGTAATTTGCACGAGTCCGAAGGACGAGTGCAANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNATTAGTATATATAATCACATGATAACGAGTGCAATTT
TCGAATTGTACGAGTTATTATGTGATTACGAGCTAATCGCGCAATGGCTT
TCATTACTTTTTCCCAGTTAGGAAAGTAAATTACAGAAATTACATTGAGA
GTTTTATATTTTTCTCTTCCCTTTATGTCTTTCTTTTATTGTTATTTATT
GATTTTCTTTCTCACAAAATAAATTTCGAATGCAATTAAAACGTTCGCGA
TGCAAAAAAAATGTAAGAAAAAACATTAAAATCAATTTTGTAAATATTGG
CGCCTCATTGAAGAATGTGATTAACGATTAATTGCTCAGAATTTTTTTAT
AGATTTTTTTATTCCAAATTGTTCCACTCACTAATATCTTTCCAACGATA
CCAAATTTATAAAGATTGAGGAATTCCTTCAAAAGTTATAGGTAAATGGA
AAAAGAGTGCACACTTATCGTGAATAGACTATAAGAGTGTATTTCATTTT
TCAAATTGTTTGATCCTCCTGAATGAGTTCAATAAAAATTTCAAACACAG
AAGCGACTTCATTTTATTTTCATAAAATCAAAATTTATTTAAGACGTTTC
GGTGTCATCCGACCACCATCATCAGTTTAAAAACATTGAAATGAAAATTT
CTAATCTGAAAATGTTAACAAATTGTTTAAAAAAAAAATGTACAAACGAG
GATAATTGGTAAGATCAAATAAAACAATACGCTATAAAATCTGCTATAAA
ATCAATCAATAAATAAATAAATTAGCAATAAAATGACTCTCAAGTGAATA
TGTGTATAGAAAAAATGACGACTAATTAAATAACAAAATAGGTTTTGATA
GTTTTTCATAGGTTTTCATTTTTCCTTTCATAGAAATCGTTCCAGAACGG
AATAAACTTGTTCACATCATTCCTACACAAGAGAAAACATGGGAGCTGTC
TTTTGAATTCAAAATCCTCCAAAAGCAAGATGGAGTAACCAGCTTGATAC
GTTTAATGGATGAGAACTGTAAAACAGACCATCAGCAGATAGGTTGTAGA
ACTCCAGCAATCTTTCTTGCATCAGATCGACTTCACATCACCTTTTCAAG
CGATATAAACCCTAACCAAAATATTAATACGGGTAGCTTTGCACTGAATC
AAAAACATAAATTCAAAATGAGACGTGGAGTTAACAGGTAAATTTGTTCA
AAGTCAAGTAATCTACACTATGGTCTGAGACGGTTGGCAAACGATATCAT
CCACCAGGATGCATCCCCTCTTATCCCCCCCCCCCCTTATAGGGCAAAAA
ATGTCGAGGGAAAGTGACGAAAATTTTGAGGGGGTGACGAAATTTTCCCC
CGACGAATTTTTTCCCCGTTACTTTATCACCCGACCAAAACTTTTACCCA
ATTTCTTTTAAACCCCAACCAAAATTAAAATCTAAATTTTTCACAGCTTT
ACTAACCAAAATTATATAAACGTCGAATCTTTTTTCGAGCTAGTGAAGGA
AACCATTTCATTTGGACAATTTAGTTGGGTGAAAGTGACTAAATAGTAAA
TTTGGTCGGGGAAAAGTGACGAATTTGAAATTTTGGTCGGGGGAAAGTGA
CAAAAACGCCTCTAGGTGGCGAAATTTTTCCCCGACGAAAAAAAACCCCG
ACTAAATAAAACTCCGACATTTTTTCCCCCAATAAGATATTTTCTACTTT
CCTATCTCCTTTCCTGATTCTAAGACTTTTTGAAATGTTTCTCACTGTTT
TCTAAGTATTTTTCTGAAATTTGCCCGTACCGGTGAAATAGGTCTCCAAC
CCCGGCTCGAAATGCAAGCAACCTTGGTTTTCAAACCCAATGCCTAACCG
CTTGCGTCAACGAGACACGACAGAAAGCTGTCATTCACAAATAGTTACTT
ATAGCGTGTATTTTCCATTAAACTTCCAAATTTTGGAACAAATTTAGAAA
ATTTAACAGTTGGAAACAACTAGGAAGATTTATTATAATGATTTTTGAAT
TTTAGAGTGCCGATTATTGGATTGAACATGAAATCATGCTTTAATTAAGA
GAATATATTTTGCTTTAATATACCATTTGGCTAATTTTTCGTGCAGCCTG
GCGCAATTTGTTTTTTGGCAAATTTAGATATTATTTTAATTCGGCGAGTA
TTAATTATAACGAATTACCCGATACGTAATATATTTAAAAATAGAGTTTT
AAGGTTGTTTTTAGGATATATCTGGTCCAGATAATTTAATTCAGTGAAAA
GTAATTTTGGGTAAAATTTGGCAACTTTTTGAGACAATTCACCAAATTTT
CCATAATTGGTTTATATTTTGTTCAACTTTAATTATAGTTGTAAAACTCC
TTCCAAGCAATACACATCAATATATATAAATGACGTACTGCTAGAGGAGT
TTGAGCACCATGGAATACAACCTACCTCAACTAATGTTCAAGTTTATGTT
GCAGATGGTTATTGGCCAAAAGCACCGGCAGTTATCTTTGATCTTAAATA
TACTCACGATGCTCTATACCCAGGTAAAATTACATACTTGACTTCTTATA
TTCCGAGTGTTGTTGCTGATCATAATTCCGGATATAGGAAGTTTTCCAGC
ATTGGGTTTTTCCAGAAAAAAATTGAATATGGGGGCTGGAGGATATAGCA
TTTTAGAAATTTACCCCCTCCCAGACATTGTGAATTTTGACCCCCCAGAC
AGCAGGTCTTTGAACCCCTCCCCCTGGAAAAGCATCAAATGACCCCCCTG
GACATTCAAAATAACCCTCAAACCGAGAAAAATTACCCCCAAACAGAGCA
AGTCTATGCCCCGGACAGGGCAAATTTTGTAAATTTTTCGCTATACCCCC
GGACACTATATCCTCATACCCCCATGTACGAACATCACATCCTCTGGACA
TTAAGAGTACTGCTATATCTTCCCCATCAGCAACTGAAGGAGCGTTAGGG
ACTCTTTTTTAGTTTCTTTCTAATTCTACGAACTTTTTACATACACATTA
GCTTTGTTGCTCAAATGAAGTGTATTTATGATGTGATCATGGATCATGTC
TAGTCAGATGATACAAAATGCCTTAAACTCGAAAAATTCAAGAAATAACC
ATCTAAAAACTTACTCCCCCCCCTTTATCATCACAATTATTGTATTATTA
AATACTAAGCACTATACTTTTTAAATTAGGGAATCTATTTGAATTGCGCT
CGGGACGATGTTTGGCGTATTACGAACAATGGCCACCGTCTGATAGTTGG
TTCGTCTCGTTTGATTATATGATCACTTCAGCTGTGCCAATCGGCTACCG
TCGAATGATACAATTCAAAGAAATCGGTTCAGCGCGAGGCCAAATTGGAT
ATTGGTTTCCTTTTTTAGAACGTGTTAGAAATAGTATGCGATTCAAAACA
GCATATTGGATAAACGGTCAGGTTAGTTCTGTATGCGCCAATCAAGATTT
AACTCCCTTTGTTGGGCGTTTTGTTCCGATACGGATTGAACAGATAAAAC
AATCGGATGGTAGAACCTTCATGTCTTTATACGTTGACGGTAACAAGATC
TGTACCACAGAAAATACTACCCCAGAAACTGTTGGTCCTACTGAGTTCAT
TATTGCAGGATATTTCGATGACGAACCTAGGATCGTTTTTAGAGACATTA
AAGTGGAATCAATATAATGATGGTTATTGAGTAAAAAGATGGTTAGGTTT
GGAAAATGGACAATTTTAAGCGGGTCATTTGAACCTTAGTGGAACAGACA
TTACTGAGGTTAAGCATACCAGGATAATCACGACGACGGACTGGTTGAAA
CTCACTATAGCCTGTTAAATTTTCGTTCGTCGTCGTGATTTTACCTAATT
ACTTAACTTCACTATTATAGTAATCCTAAGACGAAATATTGAAAGGCAAT
TTTTTTCGTGGACAACCTTCATGATTCCTTTTTTTGTGTGCCGTTATTCA
GGTAATATAATATATACAAATTGTTCATTCAGTAAGTAAATAAATGTATA
CAACCCCATCTCAAAGACCCAGTAGGATTCTTTCTGTCCTACTGACAAAA
AATAACGGACCAAAACTCGATTGTGATTTATATTTCCATGTTTTTTATGG
CTTGGGATGTGAATTCCCTCCCGAATTGAAATATTCAATTACATTTAACA
AATCTCGCCCGAACTTTAAATTTTTCAAAAAGAGGAAATAACCAAAATTC
TCAATATAGATTGTAGAAAATTCAATGGGGATAGAAAAATAGCACAATAA
TTTGCGGTGGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021726TCONS_00021726Clytia hemisphaericatranscript
TCONS_00021725TCONS_00021725Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021725-proteinTCONS_00021725-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:95547..104758 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.35	0.39	0.25	0.04	1.03	0.48	0.88	0.73	0.55	0.47	0.5	0.46	2.98	1.75	0.74	0.77	0.33	0.18	2.56	3.47	0.47	0.46	0.61	0.92	2.68	2.39	0.1	0.08	0.45	0.25