XLOC_012252 (gene) - C. hemisphaerica

Overview
NameXLOC_012252
Unique NameXLOC_012252
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000395:154782..162515-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012252 ID=XLOC_012252|Name=XLOC_012252|organism=Clytia hemisphaerica|type=gene|length=7734bp|location=Sequence derived from alignment at sc0000395:154782..162515- (Clytia hemisphaerica)
CCAATCCTTGCCAATCAATCAATAATTAAGTCAATCAATTATTCCTGATT ATTTTTTAATGTTTTAATCTTTAATACATTAAAGCTTTATAAGTGCTTGA CATGATCTTTATGTGGGGGCATTTAGTGAAAGCTATGACTAGTAATAAAG TGAGTTGAAGAAAAAGTTTGATGGATATGGCACTACACAGCAGTAACAAT TTATATTGCCTTCAAAAGCATGATAAAAATATCAAAGGTGTCAAATGGTT TGGTGAGTATTATAAAAGTCTTTTTGGATTAAAGTGTGCACTCTTCTTTT GCTACAATGTGGAACTCTTTCCTTTAGATTGCTTTGCCAGTGCCTTGTTT AAACTTTAAAGATTGGATACGGGGACGTAGCGCTGGTTAGAATCCCTTTT TCAGACTCTGTAGATGTCTGACAGGGTCCCAAATTCACTGATTTTCAAGA TTTGGTTATTTAGGACAGTTTTCAGGGTGGAAGCAACAAAATTTTTCAAG TTTTTCAAGTTTTCGATTTTTTGTACTGAGAGGGTCCCAAATTTACCAAA CATTAATATGTGACAGGGTCCACTTTTAAAACTCCAGCAACACGTCCCTG TCGGCCGTCAAGGTCAGTACCTCTTACCAGCGCTTTATTTGACTGAAAAT TAGTCAAGCAATATGTGTTCTAACAAATGAGATACAACAAAAAGCTTCAC AGGAATCTTCGATTCATTTCAGGCAGACAAAGAGATACCTTATAACCATT CTTGCATCTTACCCCTAAGTCTAATTTTTTATAACATTTGAATACTTATC CAAATACTTATGATTTTGCAAGTGCGCAGCAAATATGAATTGACATCTTT GGTGAATATTTGGAAATGTTGGAAATAACACTCCCTCTGACTTTTCCCAC TTTAATTTGCTCAGATTTTGTGAGGCAACTCCAACTGACTTTTATGGGCA CAGTGTTAATTTCTTTCGACCTGCTGGTATCGTGTATTTTACAGACCGGC CAAAAATTGCCCTTTTGTCTATACCTTATCTGATTCTGATAAAGTCAGTG TTTTTATTATTCGGGGAAAAACTTCGTCACCTAAAGGCATTTTTGTCACT TTCCCCCGACCATGAACTTCATGCCCCGACCAAGTTTACAATTTAGTCAC TTCCAACCAACTGAATTGAATTGTCCAAATGAAATGGTTTCCTTCACTAG CTCGAAAAAGATCTTGTAATTCGACGTTAACAACGATGAGGTGTAAAGAA TTTTAATTTTGGTGTTGGGGAAAAAATCGGGTAAAAGTTATGGTCGGGTG ATAAAAAGTGGGAATTCGTCACTTTCCTCCGAAAATGTTTACCCCGACAA AGTTTTGCTCTGCGTTATTGTATCTTATACCGTAAGTATCACAGCTCGAA TAAATATCGACCTGTGAAGACGAAGGTCAATATTTTCTCTGCGATGAAAA CTTGACCTCTGGTGCCAGGGTAATTGTATCTTAGGTTTGGAAAATGCTAT TGGCTGCTTACCAGCCAATTTCAAATCAGGTAAGTAGTTATCCTAATATA TCATTAAAATACCAACCACATACGTGACTAAAATGAAAGTTTGCTTACTG TCTAGATGGCCAATATAATATTTATCCCTTGTGAACATTATAAGTCAAAA GCAACGACATTAAATTGACAGACTGTTCTGCAAAGCTCATGGAACCGTGT ATTGTTTCTGTTACTAGTCTCTAGTCTCTTCTGTTTGACAAATTAAAGGG GAGGTTTCATGGTTGGTGGAGGAGCGGAATCGGCCCTTTTTTCGGACGGA GTGGCGGAATTTGGCCAAAATTTAGACGGAATTACGGAAATTGGGTTCTC TGACGGAGACGGAAAATTAGACAATTTTAGTGCGGAAAAACAGAATTTAG CAAAAAAATTTGCTGAATTTCGGAATTGGTAAAATATATTCAAAATTTGC GGAATTTTCGACAAAAATANTGAATTTCGGAATTGGTAAAAGATATTCAA AATTTGCGGAATTTTCGACAAAAATATTGAATTTCAAAGGAATTTTCGGT GACGGAATTTTGGTTCAATTTAAGACGGTTTGACGGAAATTGGAGAAAAA ATTGACGGAATTGCGGAATCAGGTGGCACACAACGTTGTTTCGACGTCCA TCTAATGTTCACAACGTCCATATAACGTTATGTGAACGTTGAAACAACGT TATGTGCCAGCTGGGAAGGCACATCATGACTGGTTACGAATTGAATCTAG CACTTTCTTTATTTTCCTGTCGAACACTTTTCGAAATTTAACTGTAAATA TTACTTTCAATCAAGGTCATAATATTTGAGAAAAAAGTTTTGAAACCACA ATCGATTTGTAATTGCTCTAAAGTAGGGTAGAGTTCAAAGGGTAGAGTTT TAACTGTGAGTCTTAAGACTTAAGACCTTATGATCTGAGGATCCAAAAGT TCTAAAATAGTCAAATAAGGCTCAAAATTCATCCCAAATTGAAATATTCG ATTAAATTAAAGAGATAGCCCAAAATCGACTTTCTTGCCGGGACTTTAAA TCGTTAACGTTGAAAAACGTTAAAATAACCATATAAAAATCATGCGGACC TTGCAACTTATGATGTAGGAAATAATGGTTTCTAACCCAACATAAGAGAG ATGCCTCTAGCCTTCCGATGTATCTCGTTGGTTTCAACGTCCGCCTAGCA TCCACTTCATCCATGAAAATGCTAGATAAACTTAAAAATAAGAAACTCCC GGCGGTGTACGACGGTTGGCAGACCTTCTAAAACCAAACCTTAGAGAGAC TAGATTTTTGCGAAAAAGTTACTCTTAGAGTAACATTTTCCGACCCTTAG AGCGACTACTTTTAAATTTTCTGAAATTTGTAACCGTTAGGGAGACTTTT GAAGCTGAAAAAACTGCCCGTTATCATCCGCACCTACCCAGCACCCATTT TTGTCTAAGTACCCAAACCCCGCCCCTGGGAAAAAACTCTTGTATTGCTC GTTGCGACATTTTAAATTTTCTGGGGATGGGCGATCATTATTAGTTAAGG CCGTTCTTGTAAAGTCATTGGTCGGTTGAAAAATGAAGCAATTCCATTGG TCAAAATTGACGTAATGGATGTTTTTGTGCGCGCGTAATTTTTTCTTCAG GGAAAAAAGGTTAAGAAAGAACTGTCGCCCATTTCACGCGAAAGTGGAGA CCGGCCTTTAGGCTTGGAGCTCGAGATTGGAGCTCAAGGGTCTTAAGAAA GATCATCTATTTATTGCTCACTTTATGTTTCAGGATATCTTCATTGTGGT ATTGGACTGACATCCATCCTTCTTGGCGCAGTATCCATATTGATTTTGCG AAATGCAGAAGCTGCCATATGCATATTATTCGGTGCGTGGATAGCTATCA CTGGAGTTGATGGAATCTTTTCCGCTAAAGAACCTACGAAGAAGATTCTG AATCAACGATATTTTGCATTCAGTTTAGCTTGTATNACCTACGAAGAAGA TTCTGAATCAACGATATTTTGCATTCAGTTTAGCTTGTATTACCATGTGT TTGGTAGCGATTGGGCTCTGCATTTTTGGATTTATGTAAGATTCTAAACA AAAGGCTTGAATTGAGAAAGCATACACCTATTTTAGTTTTCCGAAATCTT CCAATTTAGCGGAAAAAAATCTTAAGCGATGTACCTTATTACACGAATAT TACTAGGCAAGTATTCAACGGCCTTGAAATTAACACACAATTTCTATTAC TTTTTCAAGGACACCATGGCTGGTTTTAATTAAGGGAGTTTTTATTAATA CGAAATTTTTCAATAAAATGACTAGTTATTCGTGTAATAAGGTAAATTTT AAATCTTATTTGATTCTCACAGAATTGATCCATTTCCCTTTGTGGTTTTA GATTTAAAAGGAACATTCTCAAGGGGTCTAGAGTTTACTTAAAACCTATC TTCCACGCACAAAATTTCTGAGGATTTAAAAATGCAGGGCGACTAAAAAG CATGCCTGTTCCACTGATCCTCTGTAAAATGTTTCTTCATTGAGTATTAA AACAAAACACATGAATTTCAATGGAAATAGAAATATTTAATAAATCAAAT ATTTAATTTTTATCGCTTGGAATGAATGTACTCTTGTCTCCCGAATAGAC GGGGGGGGGTCCGAATAAGCAGGGGGGTAGGAAAATTTTCTAAATTCTAA TAAGCGGGCAGGATGGAATAAGAGGGGGGGGTGGTTTGAAGACATAATTT TTTTAACTGATATCAATTTCAACAACAAAAGTGAAACTTTCACAAATGAA CACGTAAAATTAGAACCAATACTAACAAAAAGGAAAATTTTAACAAGTTT AAGGTCTATCTACACTGTAATAAATAATTTAATTATTAAAATTTAATTAG CAGGGGGGTCTTAATAAGAGCGGGGGGGATGGATTTTTTTTGCTCTTAAC AATTAGCGGGGGGGGACGTCTATTCGGGAGACAAGAGTATTCTTTCCATT GAGATAAAATTACAGGTTATTTCTTCGACCAGGTGATGTTTTTTGGTCTG CAATGTAACCCCCATGGGGACCCCCACGGTTTCAATAAAGTCACACATGC TTGCACGGTATTGTTCAAGAGACATTGACAATAGAGTTTAAACGATTTCA AGCAGATTAATCTTCGATAGATTTAATTTCGTGTTTTCGGGAAATGGTGT TTGTCTTTTTCGTAAAAAAGAATCCCTGGAAATTATATCATAATTTTTGG GATTGTTTTTCTTTTGCAGAAAAAACATCCGTATCTTCCTTTTTGTTAAA ACCACCAAGGCCCAAATTGAGATAACGCAAGAAATGGAGCGCTGACTTGC AAACTATATCTAGAACATTTCTTTGCTCCTGAAATACCAGTAATTTAACA GTAGCGTAGACAGCAGGGGCGCAAATTTCTTGTAGGAGAGCAGACTTTTA TGACACTGTGATTATCTATTAATACCATGAATAGATAAATTATAGTGTCA TAAAAATCTGCTTTGCGCCCCTGTTGTCTACGCTACTGTAAATTTATAGT ATACTATAAATGAATCAATATTCCTTCATATTTATAGAAAGTACAATGAA TGCCAGCATTTGCAACATGGATGTTCTCGAAAAGAGGAAATTGGTTTCAT TCTGCACCTTATTTTGACAACACTGATGGTAGTGGAGTTTCTTACCTCGC ACGTGACCGTTGTATTGAGTTTTCAACGAGAATGCCATTGTGAATACTGT GTATTTACACTTAATAATACAAGTAAGCAATTTATTTTTCTAAATTCTGT CATGATTCTGTACTCTTGTCTGGGGGGGGTTTCAGGGGGTACCCGATTCC GCAATTCCGTCAATTTTTTCTCCAATTTCCGTCAAACCGTCTTATATTGA ACCAAAATTCCGTCACCGAAAATTCCTTTGAAATTCAATATTTTTGGCGA AAATTCCGCAAATTTTGAATATCCTTTACCAGTTCCGAAATTCCGCAAAT TTTTTTGCTAAATTCCGTTTTTCCGCACTAAAATTGTCTAATTTTCCGTC TCCGTCAGAGAACCCAATTTCCGTAATTCCGTCTANNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA GAACCTAATTTCCGTAATTCCGTCTAAATTTTCGCCAAATTCCGCCACTC CGTCCGAAAAAAGGGCCGATTCCGCTCCTCCGCCAACCATGAAACCCCCC CCTTGTCTGTGTAAGGCAGGAGAGGATAAAACTAAATTTGGTAGTGGTTG CAACATCGGTGGCTTTTTTTCTTATTGAAAATTTAAAGCATTTCCTAGTG AGGATGAGAGGCGGGGGTGCTCCGCTGAGGTTCGAAAAATAGACCCTACG TGGGACTCAAAATTTGCGAAAAATTGACCCTGAATGGGACTGAAATTCCA AAATTTTCTCAAACTTTCTACTTTTTCCCCAAATTTTCCAAAAAAGGGCA CCCTACGAGGAACTGATTTTTCTATTTTGGTGTTTTTGCGACCCTACCTG GGACTCGTGGAGGTTAAAAAAGGTACCCTGACCAGCGGAGCATCCCCGTA ACCCATATTGCCCTAGTACCCCCCCTCCCCGGGAGGCCAATAAATTTTTC TAATGATGACGTTATGGCCAACTTTTCTCATCGGAGAGGGTTTCTCATAA ATTCTTTTACACAAGTTGTAATTTGCATTTTCTTGAGTTTTGATCTCTTG TTGAACTCCTTTTTGAGAAAGAAAAATTAATCAACCTTGATTTGGTGTGC TGCCACGGCTCACGATGGGAATTTATTAGCAGGGATATCATAATATTGAC AATAATCTAGGATGGAAAGGTCCAAAAAGGATCTTGCATTGAGAGACCCC CTTCTCACAGAACCACTGGGAACACTCCCCACTGGAAAAATTGGCTAAGA TATTATTGGAAAATTATCTTCCGATTTCCCTCCCCACTGAAAATAATCAA ATAAACCGATCCTCACTGAAAAATCCTATGCTATTTTTCCGACCCACCCC ACTAAATTTTCTGACTTGAAAAGAAAAGAATTGAAATACCCAGCCATAAT AACTATGGAAAAATCAATCCTCATCGAGTTTGAGTCCCTTTATTTTTATC CCCACTGCCTGAAAAAATCCTACCGGGTCTGTGGGGAGAGGGTGTATTGA GAAGATGATCAATTTAGAGTGTTCATGGTTTTAAATTTCAGCATCATTAC AAGACCTGATTGTGCAGGAAGTATTTCCTCCACCTTACGAAGAATTGGTT ACAAACCCTTCACCAGCGATACAAGAAGGAGATCACAATGTAACACATCC TTCCAGTGAAGATCAAGATATTCAGCCACCTCTTTATGATGAGATCAACA GAAGAGTATGAAGAAGATAATTCCACAGTTGTAACATATGTGTTATAGTC AATGGTATGCAGTGCTTGCCATAGTCACGTCATTGCCACGTATCTTTCTA CTTCTGGTAAAATTGGAACAATTAGTCAAGAAGTCATTGAGCCTTTGTAA ATAGACTTGAAAATCATTCTCACCTGGCTTGAACAAAACTCTCTTGTAGC GAACCCAGAGAAGTTTCAGATGTTCCAGGTACAAAAAACGCAAATATATC TTTTGTCTAAATTTTAAACTTGAATCTTCTGAGAATGTTACACTTCTTGG TGTAACCATCGAGAGTGCTTTATCATTTTATCCTCATATTCTTCAGATTG TATTATTGTAACAAAGCCTCTCATAAAACTAAAATCATCCTCAGAATTAG ATCATATCTGAACCAAGAGCAGGCAGACTTTATATTTAATAGTTTTATAT CATCTACTTTCAAATATTGCTCTCTCATTTGGACGAGGATCCAAAACTCA GAAGAGGCGCTCAAATCAAACTTCCAGTACCTAAAAGTGCAGTTTCAATT ATCGGGCAGGACAGGCTAGGAATAGGCTGCCCAATGAGATTAAAACATCA GACTCAGTAGAGAGCTTTAAAACCAAAATTTTGAAAGCAAAAATATATTG ATCTTGCAAACTGTGTTCAATATTTTAATGATTTTAATATTTTAATTTTG ATAATATTATTTGCTATTCAGTAAATATTAGATTGTCATGTTGGTTTTAA TTAGTCTTTTTGTACTATTTTGTTTCGTACCAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021832TCONS_00021832Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021832-proteinTCONS_00021832-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000395supercontigsc0000395:154782..162515 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1 0.08 0.36 0.38 0.42 0.26 0.4 0.31 0.25 1.17 0.23 0.21 5.12 4.67 3.1 4.87 4.84 4.35 4.86 5.52 1.74 1.27 0.51 0.97 0.98 1.26 7.1 6.81 0.14 0.3