XLOC_012331 (gene) - C. hemisphaerica

Overview
NameXLOC_012331
Unique NameXLOC_012331
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000401:185770..190071+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012331 ID=XLOC_012331|Name=XLOC_012331|organism=Clytia hemisphaerica|type=gene|length=4302bp|location=Sequence derived from alignment at sc0000401:185770..190071+ (Clytia hemisphaerica)
CACCGCCCACCGCCCACCGCCCAAATGTCATCGTTCAATACAACGTACAG
TAATCTCCTTTATACAACAATATCGCCCATTATCGGCACCCTCGTTGTTA
TCTTGAATTCAATCGAGTATTTTTGTATCCGTCGTATTGAAAAGTTGGAG
AGGAGCCAATCGACGAATATTTTGTATATCAAGAGTTTGTGTATCTCCGA
TATCCTGGCTGGTGTGTTTATGATCATTCTGAAAAGCATGAATCCATTTA
TGGACAACCAGTTAAAAGGTAACAACCTTAAGTTAGAGTAGTGCCTTTTC
AGAGCTAAAAGCTGTACtaaggcccgggggggggcactcgatttctaaac
gaagGCATGTGCTgccaaaaaattgacttttcacaATCGGACCTTTACAG
TGTAGCTCTTGAAGAGGGAAGAGGTACCTTTTaagtgcattttaccgaac
aTTTCTCACCCTTACAGTATATTTTGATTGCATGCATATATTATTTTGCT
GAAACCACCCCCAAAATGAGCCTTAAATATCGCGACATAAAgtgaaaaac
aaatcaaaatggatgCAAAAGAAAATTCTACTCAAGAGACTGGAGAAGAT
GATTGTCATTCATAGCCTATACCAATTTTTTCACTTATCTTTATCTAGGT
AACAAAGCTGCAGAAGAAATATATCTCATCCTTCGTTTGGTGTTCATTAG
GTTTTCATTGTTCAGTTCAATCTTCAATTTGACTGCAATGACGCTTGATC
GGTATACAAGTATCTTTTGGGCAATCCAACGacgaaatcaaagaaaatca
ttCGTTTACAAGGTAAAGCTGTCAgtgtaaaagaaaataaactcttttta
taagcataacgtagcatacttaggctcaatTTCGGTAAAAAACgagcata
atgctaagcatacctccaagctgaaatgTTTAAAATTCGTGGAGCTTTTT
TAAAACGCTGAGCTTTTAGGGTTACATCTGGCGGATTCTGGATTTATGCT
TAGACttcgatttgttgattttctttggggcaatgaaaatttctaaattt
taagcCTGAACTTCTTTGTAATTTACTCCCGCAGGCGAAAATCTTTGGGT
CTAAGAAAGCTCAAACAGTTTTAAGCCAAGTTTGCAGAGTGTGCCACGTT
TTTTTGAGATCTCGAATGCACAACTCGGAAAAATTCGAGTGCATGTGCAA
AACttgaggttttcaggtgcaagtCCAGACGGTTTTTTAACCCCAAGTGA
AAAGTTCAGCTTACGCTATTTTCTCCTCAAGTGcagctaattttagcaat
tttttaccttttttgggccaatttccgAGGTATAGGTGCACCTTGTCTGG
ACAAAATTTATCAGACGCGCTCTTCCAGTGTGGAACTTGGTATTTCCTAA
TTTTTTTCACGAGTGCAGCcttgccatactctgcaaactggcgCGTAAGC
TTATTGAGCCTCCacctgattttttttctcattaagCTGCTTACATCCTT
TAACAGATTTGTATTTTAGTACTGGATTAATTGGTATGGGGAATAAAATT
TTTGACGAAATTCTCCAGATTAAATCCCCGGCAAAATATTGAATCCGAAA
TTATAAATTACTTTATCCAGCGAAACGATACAGAACCGATGTAATAAACA
AAACTTTCTTATAACCATCTAGATCATTTTAGGGACATGGGTATTCAGTT
TGATGGCTGTCTTGATCATCTACTGTATTCACCGTTGGGGAATCGAACCA
GGTAAATTATTGGCCCCTTTGAACTACTACTGTTGAATCTCTTTAacgac
acccctgtctcacagccccggtggaactcttttcctcagtggggataaaa
attcctattgaaatcccaatgggggatagaaattctattgctcaAAGGCT
AAgaaatccagtgggatggtttgGGAGTgccatttttaaacatttaattt
cgagtgGGAATGAAAtctaagtcaatttcccagtggggctgaaattccag
ggtattttcctaccggggacggaatttttgtcaaatttttcaggtggggc
tgggatcccagcgggtctgtgacacagggatgtgcTATGGTAAGACATTT
ACATGCAAAGTGAGTCATGGGTGTTTAACGCAAGCCTCTACGACTGGAAT
GTctccttaaaggttttgtttttaaataagagtgatatcgtttgcttact
catcaattttaatttacaagctttttggtATTGAATTTAcaaggatgtgg
agcaagattggtcagaaacaggaaaagaaaaaccgttttttgcttatata
acacaatataacaatagggagacactgtcctgatatgaaacatgtgtctg
acaTGAAGCGGGAACACttatatgtaaaaataaaatcttttaaactctTA
ACAATTTGCCTAATATAGATCTAACTCCATAGTTCAGAATTTCCTTtaaa
ttcgaacaaatttatgTTCCCCGTGCGTATTCGATTTACGGAGACTCAAC
TATTTGATTGTTGATGATATTCCTAATCTATTGAAAAGGCACTTTAATCA
AATGAATTTTGGCGTAATCATAAATGAGCACAAAAATTAATTTGCAGAGT
CAGAAAATAATCGGAAGAGTTTGTGTAGATCAAATTTTAAGAACGCACAG
CCTAAAATTAGCTCCAAATGTTCCTTGATATAAAGATTTACAGAAATATA
AGATACATATAGTTTCGTAGGAtttaaatacaccttttcgaccgtagtcg
caggatcaggcgcgtgccacccactaaactcgatccaatccttttttgac
acatttttctattgtctataggtgcgaaaaaaggactgggacggttttag
tgggataaagcggacgaaaaaatgcccgcgcggcaattggcggctacggt
cggaAAAGTTTGGGAGAATTTAATAATCTAAATCATTCATTTACACAGGA
AACTCATTGATGAGTCTTGTATTCCCAATTTCGTCATACCCAGTAACTCT
CATCTATCTGTTTTGTTACACTAAAATCTACCTTTGGATACGCAATCGGT
CAAGAACTAACGTTTCGGTAGTCAGTAAAGAACAACCGATTGAAGGACAG
AAAGAGGCGAGAGACCAAGGAAACCGAAATAACAAACAAGAAGTAAGGAT
ATTTCCTAGTTTTCATCCACCCATTGTAAGGGTGTACTGTAATTGGATAA
ATTTCCGCGGGGATAAAATTTCACGGTCAATCTCATCcgtgaaattttta
aattttgttgatgGCTTACCAGGAGACaacattttcatgattttgtgtCT
CTTTTACTGTCAAATTATACATGCTGTTGTTGGTGCATTAcgtattagcg
cttctttgatgccagttaACATTTTAGAAGGAATTTATCTGACATGTTTT
GAGTTGTGTTTCCTTATATTGTATAGCAGTATACAATATAAGGAACATAT
TTCATCATTTTCCAAGTCGCAGTGTCCGTCAGCGCCGagattcctactcc
ttcgtgggtaggacccaccCCGAATGCTAAATTTTCTCAtcatttccttt
ttttccaGATGCGATTTCTGAGACTTGCCGTTTTGACTGTTATTATTTTC
GTGGTATGTTGGATTCCTGTATCGACGTGCAACATCGTATCCGTGTCAGG
TGGGACCTGTGGGACACGTGACGTCACATCCACATTGTTTACGTTGGCTT
TTTTCAATTCAGTACTGAATCCTATTATTTATCTCCTCCATGTTCGAGGC
AAATTGAAAAAGTGTTTCAATCGACGTAACACTGTCTCAGGAATCTTAAA
CTCGTTCCGAACCTCTGAAAGGGAGAatagaaatactcaaatatcAAGTG
TTGCTTAATCAAGGACGAAGACAAAACGCAAACTAGTTATGATGAATACC
CGAGTTATTTTGAAATTCCGGATTTTTTATAATTATGTTAGCCATAATGT
GCTGTATTACATTCCTCCAATTAGTTAAAAACCAAAAGGCCGAAACTTAA
CAtagctttttattttagtagTAAACAACAGTGAAATTCCGGATATTCCC
Ggtacgaaaaaactaaatttttagacacccctttctcacagacccggtag
aattttttcagccagtagggataaaaataaaggagtgcaactcgatgggg
attgaacttctcatattttttatgaatgggatttcaattcttttgttttc
aagtcgagAAATTCAGTGgtgatgggaaaaatagcattatATTTTTCagc
gaggattggtttattattttcagtggggacaaaaatcgGTGTATAATTTT
CT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021966TCONS_00021966Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021966-proteinTCONS_00021966-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000401supercontigsc0000401:185770..190071 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.66	0.92	0.16	0.37	0.04	0.03	1.14	1.31	8.15	4.36	4.52	5.01	0.38	0.63	0.2	0.3	0.47	0.26	0.85	1.24	0.66	0.49	0.59	0.33	0.15	0.08	0.16	0.38	0.41	0.29