XLOC_012343 (gene) - C. hemisphaerica

Overview
NameXLOC_012343
Unique NameXLOC_012343
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000401:191869..200322-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012343 ID=XLOC_012343|Name=XLOC_012343|organism=Clytia hemisphaerica|type=gene|length=8454bp|location=Sequence derived from alignment at sc0000401:191869..200322- (Clytia hemisphaerica)
CTTGTTTTTCAGATCACCACAAGTAAAGTACCGTCATGCGATTGGTGGAC
ATCCTGTACCATTGAATGGTAAATCGAGTGATGAAGATTCCAGTTCGGAT
GGCAAGAACGGTGTGGGTTCCAGTCTCTGTTCAATTTTACGTCCCGAGAT
ACGCTTGATGCTACTGATAATGTAGGTTTTACTTAGACTTCCTCAGTCCC
TGTGCCTGCCTAGTCTAGTTTTTCTTCCTGGAAATCTGCTAATACCTGAG
TTTAGAGCCGATTCATTGTCGACAGTGTTGTGATTTCATAAGAAGTATGA
TGTCATGTCTCTAAGTCATTCCAAAACCGAAAGCATGTTAGGTACACGCT
TTTCTTATAAGAATGGTGTAAATCCATTTTATCGTGGATATTCTTAACTT
TTTGGGAAAAAATTTTCTTACAACATTCTTAGGTTAGGATCCTAATTCAT
ACATTGCATACTCAAACATAACATGGCGTTTTTTTGAAAGGAGTGAGTCT
TAGTTGGGGGATGATTGACAATTTACAATTGAAAATGCTCTAAAATGGCA
TTCTTAGCTTAAGTAGCAAAATTCACTGATGGTGATATTCTTAGCATTAT
TCTTAATTTTTTGGCCATTTTATCATGGACATTATCATAGAGTGTATTCT
TTTAAAACACGTGTAATATGGCTCAATTTACAATTTTGATTCACGAAGCA
ACCCCTGCAGTTTTTTTGCTTTGTTTTCCTTTTGTTCGAAAATTCGGACA
TATTTTTACTAGACAGAAACATCATAAATTTTTGACTGAAATAGCGGATT
AAAATATCACAAAATTTTACTGAAAGTTATCACGCTGAACTTTCTAATTA
CGCTACCCGAACGCAAAATCATAGTCTGTATTTCTGAATGGATGGCCAAA
CATGGCTATACATCTCGATAATCAAACAGATTGCCGAACTTAACAAACAC
AGTAAAAATGCGTTTATAGTGGAAAAAATTTACAACTGTTTTACGAGCTT
TTAATCTTTAAAATCAAACCAGACATTTTGCCAAGAAAAGTGGATTAATT
GATGTGGTTCTATAATACAGGTAGGTTTTGTAGTATTATTTTAAACTTAC
ACGTTTTTTTCTTTATAAGAACAAACTATATAGAACATAAGGCTTCGATT
GCCAAAGAATTAAGAACATATTAAGAGCAATCTGAAGCTTGGCGGACTCG
AAAACGTGCTGTTTCTTAGGAATTTGCACAGAATTTGCTCAGAAGATGTT
GAGAATAAGAACATTTTTAGAACATTTTTAGGCGTAAACTCGAAAAAGTC
AATAACATTTGAAGGCTTCAATATAGTTTTTAACGTTTTCATAAAGGCGA
CAAAAACGACCAAAATTAGTCCAAAACATAAGCAGGTTGTTTTTGGTCAT
AAATTAAGTACGGGATATATTGACACGACCAATAGATATTTACTTTATCT
CACTTTCAATAAATGGAATCCATATACAATTCAATAAGATTTTCATGAAT
GTGACTCGAGTCAGGGACTCATTTACCAAGTTTCTGTAGATCTTTTTTTT
CTCGTAAGGCTGCATCAATAAGGAAAAAAAATATCCAACACTCGTGTTTA
CTTTGCTTTATCTGTTAAGAGTAATTTATTCAGGATAAACTCCCGAACGG
GAAAATCTTCCCGATGAGGTTTCGAAAATATCTCGGCTAAAATCCAGAAA
ATCGTCCTCTCAACATGAAGCTTTTCATTTTTGGTTTTTAATCAAGCTGT
TAACATGACAAATTTCAGATGAAAATATGTTTTAGGTATTTGTTAACAAG
GCTTTTGTTATCTTTCGTCAAATTTTTTCCTCTGATTTTTGTTTTTTTCC
ACTTACTACCAACTAGAAGAACCATCATTTTTTCAACAGAAACAGAAACG
TTTTTATAAATGTTCTGCAACTCTCTCGAAGGCAGATCTCTTATCTAACC
CTATTCAACCTAGGCTTTTAGGGGCGTTTCATCAGAACTGGGGGGGGGGG
GGCTTTTCTGTACCACCCCTTAACTTTTGATCTATTTGGTCTTTTTGGAT
GAAATTTGGCACACACGATCCTTGTCACATAGGGTAACTTTTGCCAAAAA
TTTTTTTGCGCAAAGTGATATAAATAGCTATTATATTCTAAAAAAGGCTT
GAGAAAAAAGTTGCCTGGGTTTAAATTGGTTAATTTATCCTAAATATTCA
ATAAATTACGGTTTAAACGATATATTTGACATAAAAAATACATTTGTATT
GGAAAAGTGTCAATTTTTGTGACACCTTACTATACTGTCAGAATTGTCAT
CATGTGCAAGGTATGAAAATTTTTATTTATTTTGAAGCTAAGTAAAAGTT
AGAAATTTACAGAAAATTTCATGACAAAAGCTCTATTATTTCAGGAGCTA
ATACCAATAATTTGATCTCCGAACAGAAACAGCCCCCCCCTAGGCCGAAT
AGGGTTAAATACATTATCCATTTTAGAAGTGTAAATTATTATGACTCAAA
CTTGCTTGAATCCGATTTTTTTTAAATCAAATACTTTTTAATTTTTCAAT
GTAACTTGATAGGAGTTGACTTCTGTAAATGCCGGAAGAAAATATAATTA
AAAAACAGTTTTGGGAATCTTCATATCTCGAATTTTCTCTGAATGTCACA
TAAGTAACCAAGGAATGCTCCAATTGTGTAATTTTTATATGTCTTTGAAC
AAAACTAATCAATCCAGAAGTTTTTATTGCTTTTTGTGTAAAATGCCCCC
ACCAGCGGTTTGCGTGAATGCTTGAATGGGCTTTTTCAATTGCGTGAATG
CGTGAGGCCTCGGGGAGGCCTCGTAAACCAACACACATATTTTGCTTTGA
GAAGTTCATCTTGAGTGGATTAAATGTTCGATTAAAGACGATACAGTGTG
TGGCCCCTAAAATGTAACCTGATAACAAGTGTTCATAATTTTCGTACACG
CACAGTAAACCTCTGAAGGTGCTTGAAAATTAAACATCTGAGGAAAATAG
TCCTACCGCATGAAATTCTACAACAAGAATCTTGTTGTGCGCTGGAAAGT
CAAAAACTAAACTTTCCTAAAAGGAATGGCAATGTCAACAAAGTTGCATG
ATTGTTTGAAAATAGGGCACCATTAATTTCAAACACAATTACGCAACTTT
TTTGACATTGCCAGTCCTTTTAGGCGAGCGCGGTCCTTACGATTTTGAGA
TAGTATATTTGTCAGATTGTTATGCTTTCGTCCATCCCTTTAGAACTTCA
GTGTGGTGGGCAGAAAACAATCACAATCTGATCTCAGGTTACTTAAATGC
TGGTGGCCCCTAAAATGTAGGTTTTGCTTTGATTGACCACAGTGGTTGCA
AAACTGGCTCGATTATACTGAACTTTCGCCCAGTCCTTCCTGGTGTAAAT
CTCTTGGTGCGAGAAACGAAAATTTACTAGTATCATATAATTATTTTTAA
GTATCAGCTACACTTCTTTGAAAGAAGATCGCTGAAAATATTGATATTTA
TACATTTAACATGGAAAATGACAATACCATTTGAGATTAACATTTTATAA
GTGCCTACATTTAAGAACATCAAACATAGAACGACTTAGAAACTCGAAAA
TTTATTGGTAATTAGTAAAATAATTCGAGAAAATCATTATGATAGCAAAC
CATCATTTCAGTACCCTGAGTATCAGAGGTTAAGGTTTCAAAGAATATAT
TAGCCTCTGAAGACTAATAATATCAATTTTATCGCGCATGTGTCAATCTT
ATCACTGTAGAAAGAATCAAAGATGAAGAGCAAATATTACTTTATTAATG
TCTAGCAGACTGTATCAGTATGCAGTTTACTGTTTACGAATCCCCCAGAA
ACCTCCAAGTGTAATTGAAGTGAGTTTCTTTCGAAAGAAATCTAATGTAT
AACAGTAATTACTAAACTATTAATTATGGGAAATGTCACTTTAATTTAAT
CGAAATAATAGACAAACTTAATGTTATGATTCTCTATCACTGACTCTTTT
TAAAAAGCATTGATGATATTTTTTAGTCCCGTTTTTCAACGACGGGAATA
AAAATATCAACTTTGAACTTCATCCAAGATCTTGGATGGTCGTCATGGTT
ACTTTGGTCTTCGCTGATTGCGCGCTGAATAGAATCTCGATTCGTCGGCA
CATCATCGATATATGATTTCGACCTGTGCTTTTCACGGTATCATTTCAGG
GGAACTCTGAGCTGTGATCAAACACGGAAATATTACTGTTCTTTTGAATT
TTACTTTCAACTATTCTTGTCATCAAAGGTTTTGAACCATCTGCAGAGTG
GCAAGCTATACAAATTATACTTTGTTTCAAACTGATTGTTTCACATTTTA
CGCTTGGTCTACAGTATCACATTTACATTTTCCTTTGTAAAGAAGGAATA
TTTCATTTTCCTTCCGCTTTCGTTAATTGTTTTCCATTTTTTTTCCGCTC
TTTCTCTTTATTAATCTTGGAATTGCTTTCCTTTACTCGCTGTAGAATGT
TTTTTCGGTCATTGACCCATGGACGGAGATTATCCTTTGGTTCTTTGACT
TTTAGGTTTTTTCTATACTAAAGCACGTATCCGGAGCTTCATGGAATCAA
TTGACGCGCTTTCCAGTTGTTTTAATCTCTTCATCTTGCTCAAATTTGTA
TTATCCTCACTAAAGTCTGTCTCAATATAATTTGCAGCGGAGACAAAAAA
GTTGTCACTTTTGAATGTTATCAAAAATTACACTAGCTAAAAGAATCCTA
CCGGGTCTGTGAGAAGGGGGCGCTATCATAACAGATTGCCTCCATAAGAA
TTGTTAACAATTTCATGTTTGCAATTGTGATTCTTTGTTAAAATATGGCA
GTAAAACGAAACCTACAATATAGGGGCCAATGAAAAAAGCGACATCACTA
TGAGCGATTAAAAGATATTGTCAACATCAAAGCTTTAGTAGAATAACTTT
TGGGAAAGAAAATTGACATACGAAAGTTTCCAACACTGCAAAAAGTTCGG
TAAAATATCTTTAACTAGGGTCTCTAGAAAGATTTTAAATTCAACCTACA
TTTCAAGGGCCATACACTGTATACAGCGTGTCCGAAATACAAAATAGGGT
TTTTTTATAAAATCAATTTACTTTACGCGAAAAAATCTAAGCCTGCTGCG
CAAAAATAAGTGCTAGTAAGGCACATATTGTGACTGTCTTTATCATTGGC
GTGGTGGGTGATGGCAGTTTATTAATTCTACCTAATTCTATAGTGAATTT
TTAGTATTTGCCACTTACAAAATATGAAATTCTGCCTGATGTAGCGGACA
AAACTTTGACATTTTATACATTTTCTGTTAGGCCAACCATCTGTGAGTCT
GAAAATTTTAGAATCGCAATGAAAAGAATTGATAAAGAAAAAAATGAAGA
CTTTTGCGGTATATGGTGTATCTTTTATCAACCTAAAATTATTTTTTCGG
AAAATCTTTCTAAAAGCTTATTTGCTTCAAAATTATGAAAATAGTGCTTT
TTGACCAACTTTCCATCCCAATTTTTCATAGAAAAACAACCATAACTTTT
GATGCATTAATTTAGAAAAATTTTCCGAAAAATTTAAAACAGCTCAATTC
TTTGCGGACAGTTTGAAAAAACTTCGAAACAACCATTAAAACTTAGCACT
TTTTAGAAAAGAAGGGGCGCGTTCACACTGGAAAGTTTACTTAATTAAAT
CTATCAAAGTTAAACAAAGAGATTTATGATGGATGAATACACTGGTTTAT
TACAGTTTTTTGTAGGTTCACGAGATCTATTATAACACGGTAATTGATTT
TGCTTAAGGCTTCTCATTGGTTGATTTTTTATTGAGAGTTTCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCGTTTGCACTATTTCTAATTTTTTCCTCAGTTCATTCGTTT
TTGAAATCGTAAAACTTTTTGTTCACTGCACGCATTCTTTGTTTATGCTT
CCTTAATAAAATATTTTGTTTTAAGGGAAGCCTCTACCCTACCCTTAAAA
CAATAGAGCTTACGACTCTTAATTAAGGAAGATCGATTAAAAATTACAAT
ACTACGCGTTCGACTCTTTGTTAAATGCACGTTCTGTATTGTAGTCAACA
AAAGATTCTCCTAACTACATTTTTATTAAGGAAGGTCTGTAGTGTGAACA
CGACCAAGGTGATGCAACATATTATTAACAACTTTTTAAAGTTCATAACG
TCATTTTTGCAATTAAATCTTTAATTACACTTAAGGCATTTGATTAAAAA
GCAATTTATAAAGGCAATTCTTTATTAAAAGTGTTAAAGAATCTAAAACA
TAACTTTTATGTTCAAATACTAAAATCAATTTTCCAACAATGGTCAGAGC
CCTTAATTCTACTTTATCATTCCAACAGGTAAGCTTCACCAGCAACAGCT
ATGAACTCATCAGCTATCGGACTTCTCATCATCGTCATTGCATCCGATCA
ATTATCTGTAATCCAAGGTTTCATATCAACCAATTTCGATCAATGCCGTC
AAGATTACTTTTACAATGGAAGACCTCCTAGAAGCATTAAAAAAATTAAT
AATGTTGATAATCTTGGAAATGATGCAGATACAGAAGAAATTTGTCAATC
ATATGAAGGAATTAAATATTTTGCAACACTTTATGATAAGAAGTACAAGA
TACCAAGATACTCCGCTTACCTCCTTGACCCGAATTCCAATAATGGTGGA
CAACCAAGTAGACGGAGCACTTGGTTTATTGAACCAGATTTAGTTGAAAA
AGATAAATTCAAAGATATGAGCACTTTAAGTGTATTTGGAAAAGCCAAAG
AGAAGATGGAATTCGTTGCAAATTCTCAAGCAACGNAGTGTATTTGGAAA
AGCCAAAGAGAAGATGGAATTTGTTGCAAATTCTCAAGCAACGGACGATG
ATTATGAAGGATCTCTTTGGGACAAAGGCCACTTGAATCCAAACAATTTC
CAGAATGGTGCAGGCAGAACGGCAACATTTACATTAACGAATGCGGTTCC
TCAAGATTCTTGTTTGAATCGAAACTATTGGAAAGAAGCTGAAGACGAGG
CCAAAAAATTATTGTTCCAACATTGCACTGATGGCAAAGCTTATTTTATT
ACTGGTGCTGTCCCAGATGATGACAAAGCTATCTATGTTGATAATAAGCC
AAAAATATCAATTCCTAAGTATATGTATTCTGCTGCTTGTTGTGATCACA
ACACAGAGAAATGGAATAGTTTCTCATTTGCATTTGCTGCAGAAAATAAA
GCTGGCGTGGCAGGAGTAGCAGTATTAAAGGTTTCGAGATTGTCAGAGAT
GACCGGTATTGACTTTTTTGATAATGGGCAGTGCTATTCTCATTCGATTC
CTACTATGTTGCATGTAGGTAAATTCAGCGAATGGAATAAAGTCAGTTTA
AAGAAGCGAAAAGAAGAAGACACGAAATTGGAAGAACTTCAAAAGAAGTT
TGAGGAGGACATTAACAAGGGCCATAACAATTGAAACAAAACAATGCTGA
CATTACTAAAAATACACATTGTCGTAAATTATGTGAATAATAAACAAACA
GAATAAACAGAATAACTTATTATATCTTTATATAATAAATGTCAAGAAGT
TCTGCACATGTTTTTATTAGGAGTACCTTATCGGCAAAAACTTAGTCGAC
CTTGAGTGACTAAATTTTGGCTTAGTGACTAAAATTAGGGCCGACTAAAA
CTTTGGGCCGACTAAAATTAAGGCCGACTAAAAGTTTGGGCCAAATTAAA
AGTTTATAATTAAGCTTTCCTTATTTTCCAGTATTTTAAGCTTTCTCCTA
TTTTCCATCTGCTTGTAAATTTAGAAATGGCCCAAATTTTCAGTCGGTCT
TAATTATTAGTCGGCCTATAGTGACTAAATTTTGACGAGGTGACTAAAAT
TAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021991TCONS_00021991Clytia hemisphaericatranscript
TCONS_00021990TCONS_00021990Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021991-proteinTCONS_00021991-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000401supercontigsc0000401:191869..200322 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.14	1.05	0.66	0.74	1.3	1.14	18.63	16.81	3.37	4.3	15.37	8.56	10.09	7.3	17.24	33.54	9.27	11.8	6.04	8.32	7.54	7.68	5.89	5.76	5.89	7.94	2.3	1.36	0.76	0.64