XLOC_012346 (gene) - C. hemisphaerica

Overview
NameXLOC_012346
Unique NameXLOC_012346
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000401:273183..283632-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012346 ID=XLOC_012346|Name=XLOC_012346|organism=Clytia hemisphaerica|type=gene|length=10450bp|location=Sequence derived from alignment at sc0000401:273183..283632- (Clytia hemisphaerica)
CATAAATATAGTAATCACTTAACGTGATCTTTTAAAGATGCACTGTATCA GGCTGGAAGCATGTTTACATCGAACATGTGCATTTCCCTTCTCCTGCAGA GCTAACCAACCAGATGAAAAGGTATATTCTGTCTATTTATTTAAAGATTT CAGGATGATGTTTTCAGTTGGTAATACTCATGTGTACATTTTTCCCACCT TGCCCCTATGAAATTAATTCGCCGTCATAATTCGACACTTCAAGTCGACT CATCGCGCTTCAGATAGGGTGGACAGGCCAAAATTTTCCCCTCAATTTTT AGTATTTAGAAACCAAACTAATTTTATTTGAAAGTCCTTACCTTTGTGAG AAAAATGAGGGGTCATTTGTTAAAATTGGTTAAGTAGTTCCAAAGTTATT CCATTTTCAAACCACAAAAAAACCACCTTTTCAAAGAATCGCCTCCTTAC ACCACGCCAGCAAGAAATAATTTTCGGAAGCACCAAAATCGCGCCAAAAA TGGCGGATGAAATCTAGTCTTCCGCGTGGCGGGGCGTGAGGAGTTTTGCT GACGCGGTCTGAAAATCGGCCCGATGACTGTTAAACTTTAGCTTATCGCT AATGAGCTGGAAATGATAGCTAAAAACAAATTTCACCACTAGAAAGCTGA AATCCTCAGCTTTCAGATGGTGTAAGGGGCTTAAATGAAAAAATCCGCAA TCTTGTTAAAAAATCGCAATTTCTTCTTATTTTTCGAAATTCCAGACAGC CTGTAGATTTTCAAATAAAGCAGGTTGTGATAGATTGTAGCCTAATCTTA CCCTGGGATTACTAAAAAAACCGCGATTGAAAAGATGCACCAGCTCAATA GCGACAGCCATTTGTTTCAATGTGGGTCGAGAATTTTCCAGTGCCGTGGT CAGCGCTAAATCGCGTTTTCAACTTGACGTCGAAAAACATGACTATCTTT GGAAAGAAAATAGATACCTTGATGCAGTTTTTTTTACTTGTTTCCCTGAT AATTCCTGATTGATTTGAAAAAAAGAATGAACACATTTGGATGATTTNNN NNNNNTGGTTTGAATTTTGTGCCAAAAAAGCTGTTGATAAGGTTAGCCAA TCAGATTCGCGCACTTCCAATCAAAACAATAATATCACGTGATTTCAACA ATTGTTTAGCAGCCAATAAAATTCTGCGACCAGATTTGGCATCTACAAAA ATACCCGGCTACTCTGTTATTTCTATATTATTATTTGTTTGAACTAAATG CTATACTTCGAAACCACACGAACAGAGTAGACGGGTCTCCCAGCTAAAGT GAAGGTGGTTGAACAAAATGTTTTTGGCATATTGATGTAACTGTTCGCTC AGTTCCATAAAGCAACTTTGTTCGACAAGTTTGTGCTGCTCCGCCACAGT ATATTAGCTTCTTTTCAAAGCCAAATTCGGAATGTAAATCGGGAAATTAC TTCCGATAACGGATTACACACTTTTCCTGTATCCTTTTCAGTGAGGATCT TATCGCGATTCTCAGATTTACGGAAAAAACCAGCTTTTAGCTGATTTTTG CCTCGATTGCCCAAAACCCGTAACCTTTTTAGCTTGAGGGAAGAAAAAAA TTAGCGCCAGAGGCGGTTTGTTGGTTATCTGTCACCCAGATGGTGAAATT TTCTTTCGACACGCTAAAGCTCTGAAGGTTGGGAAATTTTCAACATCTGG AAGGTTTAGTTTTGCAAGACCGCGTCAAGGATTTTGCAGCAGGAGGTCTG GTAACCCAGCCCTCATTTTCGGGGATTGGCGGGTCCAACCGAAATATTTT TACCTTTACGCGCAAGGGTAGTTGAACCCGACTGAGGATTCGACACATCA AAGGCCGACTATCATTCCTCTCCGATGGGAAATTAGCCCACTCCTAAGCT CCTTTAGAGCTTTAGCAAGGGTGGCCGCAAATCCACCATCGGAATATCAG ATAAGTTTGTTGGAGCGTAGTATTCTGCCACTGGGCCGCGCGCGAAATTG CAACAGAGGGGCTATGGACTTTATTCCGGATAGACAAATATCCGGGTACA ATAAACGTCAAGCTGTTAAGTCTGGGAACGGTCGAAATTGCAATCGCGTC CCAGGACAAAGATTTTGCAAGCAAGGGAAGATATATGAGGATTTAATATC ATCAAACTAATCAAATTTTTTACTTTCCGAACTAATCGAACTGCTATTGC TTCAAAAATTGTGAGTGTTGGATTAGGTTCGATTAATTTTTTTAATCGTT CGATGGAGTTCGATTAGTTCGATTGTTCGATTGGTTAGACGAGTTCGATT GATCAGGTCTGGATAAGCCCGAAGGGCTAGAAGTCAATCTTCTTGGTAGG ATTTGAAGCCAACAAATCCTGCTACCAAAGTTGCGCAGCCTTGAGCGGCT TGCCTGGTTTTTACACAAATGACAGATTGGTAGATTTGGTAGATTCAATC TGTCGTCATTTTTTAAGGCTTCACTTTTTCTTGCCTGAGAAAGGTTAGAG ATTAAACTCTAGCCCTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNTCAATGATTTTTTACGGCACTTTGTTGGCAATCTAACTCTCGCATCAA ATTCCCACTTTCTTCAGTAAATTGAAGATGAGAAAAAACCTAAGCCACGA ATCACGGATTGTAACAAATATATGAAGGGTGGGATTTTACAGCCGCCCAT CGTGCAAGGAACTGAAAGGCAACGGGTGCCAAAAAGAAGGGCCGTTTGAA ATGCGGCAACCTCATTGGTGGAAATTTGATAAGCAGCTGCAAAGGAGCGC TGGGAAGCAATCAGTAGAAGAGACCACTTTCGATTTTGTTGCAGATTTCT ATAAAAACTTCTCTCAGGGATTACTTCTTGTCAATGTACATGTACACATG TGTTGTGTCATGAATCTGCTGTCAGGAGTTTTCCTTATTTACAAGCAAAA CTACAAAAAAATATTGGATTTGTCGTTTATTTAGTTTCTTTCATCATTTT TTATTTTATTTTTTTTAATTTTTGTTTTGTTTTTGTCTTAATATTTAATT TTGATTTTTGTCATTTCTTCGTCCTCTTCTCTTAGAGGCGGACACTCAGG TACAGGAGCCAACTTTTCAACATTTCCCTTTCTGCTGTACTTAACTGTTT GGTCAGACTTTGTGCCTATGTTTTAATTTCTGTCTTCTTGTTAAGCTGAT GGGTGACTCTAGATTGGCAGGATATGCTTACTCAAGGTACTGCACCTGAT CTCAGACTTCAGTCTTCAGCTTACGAATCACTTCCTTTTGTGTCTTGTGT ATTCCTTTTGTTTTTTCTTTCTTCCAAAATGTATATTAGGTTTTTGTTAC AGACTGTCATGGTTAGTCGCTAGTTTGTATTTTCTTCAGTGCATATAACT TCACTATACTTCTTTTCGTTTTATAATGCAATGCTATGCATGTCTTTTAT GAAACTGCCCTTTTTTGAAAAAAAGTTTAAACAAATTTTCACATACCCAA CTAAAAACTATGGAGATGAAAAAAAATAATTGGCATAAAAATGAAAGACA CAGAGATGGAATAACAACATTGTCTAATGAAAAAGCTGTTCTGTTCCAAT GTCTCGATACCACTAGAGATTTGTTATTTGTACTTATCTTCAACCATTTA CTGTAAGCCTTTTGGAGTGACTTTTCCGCAAAGCTGACTTAAACTTGAAG TATCATTTTAGCAATCATGAGTTCTGAAAAAAGAAAAAGAAAGAGTGAGG GCATGAACATCCCAATTGAAACAAAAAGACAATTCATAGATGCAAGGAGG GATGATAGATCAAAGAAAACCAAAAGGAGTAATGAGCACACAAACAAATT TGCATACTCAGTCGAACCAAGAGGTATACCCAAATCCTTTCATCAAGTGC TAGTTAAAGCTGGTTTAGTCTAAAGTCAGGTTTATTATATATTTAAATTT TGGTCTGAATCACTATGATAAAAAGCTGAGATTGCAAAAGCATTACAGTG TTGAAATGAATCATCGAAACAAAATATAGCATGTCATGTTGGTTGATTGT TTTATTTTACAATAGAATGCCATATTTCTAAAATTAGTTAGATCAAATAA ATATTTTGCATTGCTTTTACAAGTTCGGCAAATAGCTTCATGAGTAGATT GGGTATTTCATTGATTTTAAAAGTTCTTAACCAACTTGAAGGAGCATTTC ATTAAACCCTTGTCTCAATGACCAGCTAGAAATACAACTTTTATATTTGT TTTACTCAAGTTCATTTCAAGACTTTCCTAAATTTAACAATTCTTTTTTT GTTCTTTCATTTCAAATCCTAATGTAATTTAACACTTCTTACTCAACAGG TATAAATGTCCTTGAATATGCTGAAGCCAGAGCACATGAAATATGTAATT TGAAGAGTGCCATAGCAGAAGCAAAGAAAGGGTACAATGTTCACACTCTA CAAAAGTTACCACGACATATGAGAAGAAGAGCAGGCAACCATGATGTGAA AAGACTACCAAGGAGATTACGTGATTCAGCTGTTACAAACATTGTATGTT CTTATTTGTATACGTTTTTTTTAAACCAGTCCTATAACTTATGGCATATC CCAGAATGTCATCAGTTGGTCTTCAAGCATACTCATTTGTTTACCAAAAG AAGTTATTTTAATTCTGAATTTAGATGAAGGATGACGACAAAGCTTTCAT TACTTTAATAATGCTCTATAAAAAAATATTTTTGAGTTGAGCTTTTTGAC CTACAACGAGTCGAGTCGTTTGTTTGTTCGTTCGTTTGTTCGTTTTGTGC TGTAAAAATCCGATTTTTTTATTCGGGGAAATTCCCTTTGGTCATATTTA GGGAAAATTAATATTTCTCGCAATTGGCTCGCAATCTTTTTCTGACCTTT TAGTCTGCATTTTTCCATTTTCTTTTATTACATTAAACTTCAGGTAGGTC CATTGAGCATTTAGCTTGTTTCCAATATTTTGTCAATTATTTTTTATCAG GCAAAGTCTAATAAAGATGTTAAAAGCAAGGAAAAGAAAAAACCGAATCG GCACCAGCGCAGGAAACCTAAGAATCTATTTGAAGAATACAAGAGAAGAC AAGACAAATGTACCTGGCTTGAAACCCACATATGGCATGCAAAGCGATGC TACATGAATGAAAAATGGGGCTACAAAATCGCAACTAAGACCTTTTCAAA GGCTGTACGCTCCTCATACAGAGCTGCAAAAAGTAGCTGTTTGATTCAGG TTTAGCTTTATTAGAATTTTTATTTTTTCATGAAATCCTCTTAACTGATA TTCATCATACAGAAAAAAGTGAAAATTATTTGTAATCATCTATCATACTT GTTATTGTTGTCATACATTTTCTACTTTTTGATGATTGACAATACTCCTT TAATTCAATAGGATATATCGTTTAATGAGATCATTGAGGTTACTGGGAAG GTAGAGTCAATAAGAGATTGCATGAAAAAGTTGGGAAATATTACAGGTAA GAATACCTAATTGTGTATGATAATGCTGTCCTTTACATCTTATTTTATAA TAGCAAAGAGGGGATGAAAAAGATGATGTTTTCTGATTTTATGTTTTGTT TTTAAACATGAATATTTATTTAAATTTCTTCAGATATGGAATCAACACAC AACTGTACAAAGTTCATTGAATTTGTTGCATACCAGAATGACCAATACCC AAGAGGGGCAATTGGACCCATCAAACTTCTCTGGATCTCAAGTATTGATG AAGCTACAACGAAATGCAATGCTGTTATTATTTCACATACTGCAATCAGT AAACAAGTAATAAAAGAAATTGAATCTTTCAATAAAACACTAGATGCAGA TAACCAAATATCAATCACTCACCATGTCATGGATTTTGTCTTGTTCAAGC TTACGGGGACACAATCTGCTTCCGTTATACAAAATGTTTTGACAGTAAAC GACCCCGATAACCAAAAATGGTGGACACCTCTTTTTGAAGCTGAAGATAA AACTGTTTTGAACTTAAATGTGAAAGATCCAAGATTGTATCTTCCAAAAA AGAAACAAAACGCTCTTTTGTTGGATAAAGATATACCAAGTGATCAGAAA GGTATGTCATACATTTTCGACTTTATGATGCAATAGTATTATTAGAAACA AAAAGGTGATCTCTTTTAACAGTAATATTGTCATTATTTTATAAAAAATC TGGGGCTTAAGAAATGAATTGATCAAATGAAACAGTATTGTTCTTACCTT ATAACCAAAAAAGCCAGACATATCATCAATACAAGTCAACGTAGCTTATG ATTATACAACCATTTAAAACATTTTGAACCACAGTATGAGTGTGATTTGA ATAAATTTTTCTTTTTGCTGGTAAATTTCTTGAGCCATGTTGGATACTGT GGAGTATTATGTTTAAGATGTGTTTTTTTTTCAATTTAATGCCTTAGATG AAATTAAGGAAGATCTGAATGGTCATGCCACTTTATCCAAGATCTTTACT GAGTATTCTGATATTTGGGACAAGCAAAAGAGGATGTTTTCATCAAATAG CAAAATTGCAGACCATGATATAAACGAATCAAAAGCTGAGTTGCTGTACT CTGATGATAACAAACCAGTCGTTGAAAGTATTATTCTTATCATTTTCTTA TGTGTAAAATTTAGTTTGTTCCTATTTAATTAAATTGGCTTGTTTTCATG CTCTTGAGTAGCAGGATGGTTTTAAGAATAAAGAATATTGTTTGAAAGAA GTAAAAGTATTACAAGTGCTGTCTCTCGTCAATGAAAACTGGCGATTGTC TACCAATTATCCCTTCCTTCTTTACTAGGTTGTCAAATCCCTGTGTGTAT TCTGAAAACGCCAGGTAAGGTTGCAGAAACGTAGGAGCAGTCTTTTGAAA AGATCCTTTTGCATTCAGATAATAGAGAAACTTGTCTTCAAAGAATATTT GTATTTGAGAACATTTTGTTAAACCCTTTAACTGCCGATGTCGGCATATC CTGACATGAGCACTTTCAATTTCTTTGCCGATGTCGGGATTTGCCGACAT GGGCACTTTCCATTTCTTTGCCGCAAAATTTAACACTTCTGCAAAAATTT TGTATTAGATGGTTTGAAATGAAAAAAGATAATAGTTAAAAGCTATTCTA TGTTGAAAAATAACTATTCAACAATGTTCAACTTAAAATTATAGTCCTTG GCTGATACTTCATATATTATTCAGAAAATGAAGTCAAAATCGCTACCTTT TGCCCATATCGGCATATGCCGACACCCTGCGACACCTGGCAAATAGGTCG AACCTTCTTTTTTTCCATAGGTCGAACCTTAAAAGATACGAACGGCAGTT AAGGGGTTAACATTAATTTTCTTTGTGTTCTAAAATTACATTTGAATTTT TAATTTTTTTGCGCCTTCTTCAATTTATTGTATTTTCACAGGAAACAGTA CAAACCATTTTGCCAAAGGTTTTGAAATGATCTTACCATCAAATTGGGCA ATGCCTTTCTGGATAGCTTTAGTATACCAAGGTGCAAGGGCTGGATGTTT GGAGGAGGCTGCTAATGTCTCTTACGAGGCTTCGATACTACATTTTCCCA GAGATTACATTGATACTAATGTGGGAAAAGCAGTTAATGACGAGAAAGCA CAAGAATTACATAATCATTATAATAGGCAAGACGATTGATCAAATTACAT TTTTTGTTTGTCTCTTTTAATTTTATCACTTTAAGAAAAAAGGCCCAAAG ATTATTGAAATATAAATATAAATATGACATAAATAAACTTTCATCAAGTT TCAATGTTTATTATGTTCTCATGAAAGCTTAATTTAATTAATTCAAGCTG ATTTAATTAATAAAGAAACAGAAGTAGTCATAACTGTTCTGTCCTTTTAG GGTTCCACCAGCCAAGCGTATATCATACGAACCACTGGGAGTTAGATGTC CATATTTTTTACCGTGGCAAGATCTCATCTCTCAATGGAACTTGAATTTT AAGCATTTGACACAAATTGACCTTATCAAGCGTGAGCACAAAGAATTCTA TGTTTTGAGAGATTCATCAATTTTACAAAGATTAAAAACACTGATGATGG ATAAAACATTCAAATTACCAGATTTAAAGGAACTGGATGTCGATAGAGCT TTGGTTCCAATTAGATTAACATCTACAAAGAACGGTGTCCCAAGTAACAA TGCTATGCTTTGTATTCCATCCTACCAAGACTTTTTAGATCTCCAGGAAT CAAAACTTGATGAACTGACAGAATATAATGGGCCAAAAGAACCACAGCAC AAAGGCCCTAAACATAAATTTCCATTCATTTACAAAAACCATGAAAATGT AGCCTTCCATAATGTNAAGCGTATATCATACGAACCACTGGGAGTTAGAT GTCCATATTTTTCACCGTGGCAAGATCTCATCTCTCAATGGAACTTGAAT TTTAAGCATTTGACACAAATTGACCTTATCAAGTGTGAGCACAAAGAATT CTATGTTTTGAGAGATTCATCAATTTTACAAAGATTAAAAACACTGATGA TGGATAAAACATTCAAATTACCAGATTTAAAGGAACTGGATGTCGATAGA GCTTTGGTTCCAATTAGATTAACATCTACAAAGAACGGTGTCCCAAGTAA CAATGCTATGCTTTGTATTCCATCCTACCAAGACTTTTTAGATCTCCAAG AATCAAAACTTGATGAACTGACAGAATATAATGGGCCAAAAGAACCACAG CACAAAGGCCCTAAACATAAATTTCCATTCATTTACAAAAACCATGAAAA TGTAGCCTTCCATAATGTTCAAGACATTGGAAGATCAACGCATTGGGTAA TGGGCTATCTGCAGACAGGAAATTATTCGTTCCAAGCTGGAAAAGGGACA GGGGTTGGATTTGTAAGTGCAATTGCCCTTTATTATCATTGGAAATGTCT TGATGGTAAAGAGGACAGGAATTTGATTTTGTTCCGAAACACGAATACTT TGCAATATAGATTTTGCGAAATTGATATTATTTGTTGATTTTTAGCTCAC TAACAAATTTTGCTTGGTGTAAGTTTTTTATGGGATAATATATATATTTT TTATATTAAAAATTATTCATATAAAGTGTCATGTGAGACAAATATAGATC ATCTCTGATCATCTCTATATTCCATTGACCAGTGAAAGGTTGCTTGGGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021999TCONS_00021999Clytia hemisphaericatranscript
TCONS_00021998TCONS_00021998Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021998-proteinTCONS_00021998-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000401supercontigsc0000401:273183..283632 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
POP1ribonucleases P/MRP protein subunit POP1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.38 22.19 8.03 6.4 28.93 20.42 14.2 13.91 7.78 8.51 7.31 6.47 6.49 7.15 7.36 8.7 8.12 7.85 1.76 2.09 8.14 7.7 30.03 25.73 9.21 10.61 2.83 3.73 18.3 22.2