XLOC_012989 (gene) - C. hemisphaerica

Overview
NameXLOC_012989
Unique NameXLOC_012989
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000443:244782..251726+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012989 ID=XLOC_012989|Name=XLOC_012989|organism=Clytia hemisphaerica|type=gene|length=6945bp|location=Sequence derived from alignment at sc0000443:244782..251726+ (Clytia hemisphaerica)
TTCCAGTCAATCATCATCATACAAGTAGGAAAGGAGAAACATTAGTCTAC GCTCATAATTGTGGAAGGCCTACCAATATACACGCATTCGAAGTTTCGGA CGAGAATGGAATCACAGATGACGATACATGTATCCCAATCAGCACTGGTC CTTCAGTTGCCAACACTGTCAAAGAATTCAATCAAAGAGCAATGCAGTAT TACAAAGACCATATCGACGTCAAAACCTTCCCACCCTCGTATTACgtaca aaatgaaaacattaaagAAGTTATCGCGAGTCTTGAAAAACATTCATCAC TTCTTGGAGGAAAAATTCTCGTCGGATATAACCCCATAAACCATCTCAGA ATACTTGGACTCGATTATCAAAAGATTGAGAGTGTTCTGCAATTTTCTGA AAAGCCTGATCACTATGACAACACAATCGTTTGTATTTATCCCAATCATA GCTTGATGTTTGTTTACGTGGTTGGTGAAAACGAAAAACATCTTGACAAG GATTTGGCGAAAGTCAATGCTGTCTTGAAAACATGGTGTTATGTTCACAG GCAGATTCTCCAAAATGAACAGTTTACTATTGTTGGAGTTCTCGTCTTAC CGGCTTCAAGCGActtgaacaaaatgtttaagCAACATCCTTGCTTAAAT CTAAACACAGAGAGTCAGGATTTTGTCATTTCTTACGATAAAAGTTTTGG ACAGTGGTTAACCAACTTCTTANTGAAGCAGCATCCTTGCTTGAATCTAA ACACAAAGAGTCAGGACTTTGTCATTTCTTTCGATGAAAACTTTGGACAA TGGTTGACCAGCTTCTTAAAATTAATCCGGGATAATCGAAAGCTTTCATC ACCCTCAACACCAGAAGTAATGGAAAATATTACAGGCAACATGATGGCGA GCATGGCACAAACCAAAATCTACCTTCCTCGTGTTTCAGGAAATGACACT ATGAACGTTAAGACCNTCATCGCCAGAAATAATGGAAAACATTACAGGTA ACATGATGGCAAGTATGGCACAAACCAAAATCTACCTTCCTCGTGTTTCA GGAAATGACACTATTAACGTTAAGACGATCCTGTTAACTGAACCTCAAAT CTCCTGCATCGAAAGCCAGTCAAATTGGAAGCTGATCCAAGCTTCCTATG GCGCTGGAAAATCAATCACTTTACACGAAATTGCAAGGAAACTGCTGAAA ATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGACCCATTCAGTGC ACTAGATAAGAAAGTCGACCATTCATTTAACGAGCTTTGTGAACAAGAAA AATTGACACGAAAACGAGAAAATCTCATCTCTTTATCGCTTTCTGAAGCT GTTGGTGAAAGAAAGAATGTCACCGATTTTTATAACTGTTCCTCATTACC ATCCAAAAATATTGCTGACGTCATGCTTCTCTTAAAAACCAAATACAAAC ATCGAACATTACATTTCCTCTTTGATGAAGTTCCACAAGAGATGTTCACG AAGACCTACTCAGAAACACTACGTGGCCGTTTGGAGAGTGAATTTCGAGA ATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAAAAATAA CCGAGGAAGGCAAGGTCACCAATTCACAGGAGATTGATTTAATAAGCTCA GACATGGAACTTTTCAAACTACCAACCACAATAAGGATGAGCAGTTGCTT ACATAAATTGAACGAAGTTTTGGAAGGTGAAATCGAAAGTTCGCCCTGCT CCTTAAACTTAGAAGTTCGATCAAAAGGTATAACATACCATTTACGTAAC ATTCTTTTATAATCGTGTTCAATTGCAACAGTGTGCAAGTAAAATATGCT CATTTCCATTTATTAccgaaatattttcttacattttgatttttcaggaA ACGTTTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCCACGAAACT CAACCAAATGGAGATGGCGAAAATAGACCAGATGACTCTCAATCGACAAC AGAAGTCGAATGTCAGGTTACCGAGATATTTTTGTTAACGAGCGCACTGT TTACAATTAGCTTACCATTGAAATTGAATAATGAAGCTATTATCTCTTTG TCAGAACCGATCTTTTTAGAAATTCTTCagactgattttttttgattttc ttttctcaGACTAGGACACTTTTCGTGTTGGATATTACAGCTTATTTTTT AAAGTCCATTCAAATTATCTTCACCGGATGTAATTTGCTTCTCTATAACT TGTGAAAAAAAACGTGCTCTCCTTGGCAACACACCCTCCTCATAGACCCG CTAGCAGGATCTTTCAGGCAGTTGGGGTTAAAATAAAGGACTAAAACTCA ATTGGGAAGATTGGTTGATATCCCATGTTTAGAGAGAATAGAAAAAGAGA AGCTgaccctccgatatcatcggaccgggccctattccgggatagtttcc tacccctagatacggaaatcacagcgcttaccagacattgtactctgtgc tcgcgacacatcagagccatgctgtatcgatgatgatactcGAACGGCAC GGGAAAACCTTGCGTTCTCGCAGGTACTGAACATATGAGTACCATCACCA CTCCACATTCAATGTCCAGCATATCTctccatactcttgtatcagagtaa tggtaccctATTCCCCTTACATGGTATGGGTTTACCCGGGCCAAGGTACg ctcacttgccaagtgaattgcagcaccgagtgggaatcgaaccctgacct ccagcacggaagtcaagaacgatgaccactacactactgcgcatgttttc gagccagaaaattcagtggggatggaaaaaatagcccaataatattttgc aatgacgatttgcttatctgatcaTTTTATGGGTGACAAaattataattt tccactgaggACGATGTTTCATCAATTTATCCAATAAGAAGGGtccctac cgggtctgtgagaaggaggtaaTTGCCATTGATTCCGAAATCCCGAATTG ACTAATTCCGAAACTCCTTGATGGGAAGAGAAGCCACTTATTTAAACTgc agaaagaaaaacaagcatgaattttttaaattgtttttattcacgtcttt ttttttaagaaactagttttaacaagcagcctcaatgtttcttaagaaat cggccttttgagccttaaatgtttcttatatgtttctaaactttttgaca taatcagcctcatggaaggctagactgaaaagttcttaaaaaaccgaatt taaaaatgttattttctcattctcagcctcagcatgtttttgttagatgt ttcttagtttttaggcattctgagcctagtgtttcttaaaagtgtgtttc ttaaaaaaaaaaacgggtaCTAGAttagttccatttatactgagacagaa aaatcgtctgagacgagtagtttgtaaaaAGTGATCTGCggaggagatcc tatttattgaaacatgaatggaaagttacactcctccataatgctcattt tctaaattgctcgtATCAGATAAATTAATCGTCtcacaatcatggacaaa aggttgtagacaaatgaaatttcagtgaaatatgataagaaatataatag agcaaaatgactcttcaatgtgtctgaaaaaggagtgaagttaagaaaaa cacttttgaagtcgttgcattgcttttaaATTGCTTTTGAAGGAACCACC AGCAAAAAAGCGAAAAGAAGATCAAGAAGCAAGCGAATCATTTGACCCAA CGAAGCTACGCGACCCCGAAAACGTTTTTAAGTCGCAGCCACAGACGAGT GGAAATGAAGAAGTCGTGAAAGAACTGTCCACTACATATACCTATATGAA AGGGAAATGTGGGCATTCTTTCATGAGCTCCTTAAAACCACGAATCTTTC ATTTCACCAAAGCTTTCACACCTTTATTTGCTTGGTTCCTTCCGATGCTA GCAGCAATCCTCCAGTTCTGTTTGAATGAGAGAAAGGAGGATGAAGTCGT GGTATTATGCGAAGATATCTGTCAAGTACAAATGGTTCAGTATGCCCTGG AAAGGATACACAAGCGTCCAATTGCATATGCACCTTACCTTACCGGAGAA TATCCTCAAGACATCCACAAGATGAaggaaaaattcatcaaaaatttaga CGAGATGGAGACAGTTCTGATATCCGATTATCGGTCTGTTCGTGGATTGG AAATGGCCCATACAATCATCTTTGTGGATCCAGAAAACGAGGCCAACGCA CATTTTCTCATCGAAGCAATCACACGAACCATAACAAATCTTGATGTCAT TTCAACAAAACCTTTTCCACAAAATCCTTCCACGAGTATCgaaagagctt ttcaaaaatatgtcgATGGGACTTTAGCTATTAAGACACACGTTGAATCA AGCAAAGACGCAGAAGATCTTCTGAAAGTACGATTCCAATACAACAAAAA GGACGGCTCAcaacaaacaaaaattatttcacagaAATTTACCGATTTCA GTTTCGACGTTTCACAATCTCTAgatgattttaacaaaaatgaagAGCTA TGGCAAAACTATTTCAGGTATAatttttctgttgaaattttcaattttta atgatCTTTATTATTACAAAAAGCTCAATGAGAGGATAAgtcatattttc caaaattaggcGCCCGCTAATCCTTTAGCCAAATATACTCCAGACTAAaa aaagtacatatttttttcctttaggAAGGCGTTTACTCTTTCAACTTCCA TTTCATCTTTGGGAACGTAAGTCAATACAGCTGATGTCCTCTGATTCGGC ATTCTGTTATTCGACAAGCTCCCATTGTCAATCAACTAACAgtcattttt gacaaatttcctttaaatttcTCATAAAAGATACCTCATCGGGGAAAAca tcgtcggggaaaagtgacgaaattttggctaaatgacgaatatttttccc cgacgaaaattttccccggccttaatgcgtttaccaactaccagcaagtg acgaatatttttccccgacaaaaagtttccccgacgaagttttccccgat aaggtacttttTTATCGGACATTCTATCGCTATCATCTTCTTGGGGTTGG TTTAATTTGAGATTCACGATTTAATCATTCATCGTAATGGACGATTCGCG ATTCATGTTCCATGCATAAATTATGTTGATCATGCGAAATCATGCTAATC ATGACAAAATGttttaggcaatttacaaagTTTTATTCGCAGAAACCAAC GACAAACTCAANGATCATGCGAAATCATGCTAATCATGACAAAATGtttt aggcaatttacaaagTTTGAAACCAACGacaaactcaattatttttaaaa acataatttatgtaagattatacaaattatattcaACGAAGCTTTCATTG CATTCTCCCGACTGTACCATGATCCTtaaggccgctacccactcagcatt ttatggtgaACAAGGCGCACAGCTTGGGAGCTTTGGTCGCTGAACGCTTT TCCTATTCCACTGATCCAAAATAAAGGGGAGATGTTctgcacattttttt cttttttctattgttgatacttttttgcacacggtacaagaaatgtctct tctgattggctatttaaaaaagaacaatagggaaGCCGCACAGCTTAGCT tagcgaaaaaagttgaaaagtttcaactcttgttgcgctcaaagcgacag cctttgaaggcttgatttatgtaatttatgcaataattaagcTGCGCGTC TTGTTCGcagaccataaaatgctgagtggatAGCGACctttaaaaagaaa gtaaatcACGTGCAGACACTTTCTGCGCTCTCTTTATTCATATCTGTtct ttacttcgtacattacggtccgcaaaccatggTGCTGAGAATATTGTTCG TCagtatattgtgtagtctaagtaatACCCTTAATTAGTTGTAGTTTTAT TGCTTACTGATTAGTTTTTTGCGTAAATTTACCGTcgtaaacaaaagcga gaaaagattatgccattgttttggAAATATGTTACATAGTTTAAGTTTTA TGTAAAATATTAAGGAATAAttagcatactttatgcatgggtCGCGAATC GTGCATCCTAAATTGTTAGACCGTCCATCTTAAATTGCACCAAACCGTCT CTCTGGGAGAGTTTTGATTTCTAGCATATGAAAGGGTTTTTGGAATATAG TATGAACTTTAGACGATCCTATCCTCAACACAATGTCACAACAAAAGGAA TAATTCGGGAAACgagataaatttgaaataacAGAGTTTAGTTCGGAGGG TTCGACATTCGTGAAAGATTCCCTATGAAGACTGAATGTTCTATTTCCTC GATTTTGCAATACTATATAAACTTCAAGTGTAGTAAAAAATTACCCTCGT TAGCAATGTAATATTCCAATCTccataaattttgtttttgctgtTCTGAA AGGTAAGtaataagtaagtctgcgaccgcagtcggaggcgacccgaaggc tcctctttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNgagaggcatcaagtaccattttgggaatct ttggtatgacccggctgggggttgaacccacaaccttgcgaaccgtagcc ggatgctctaccactgtactacggtctgAAAGGTAAAGCTTCTATGGATG ATATATATTAATAATTTCTCTTGCATATAGCAACAAATGGGATGGCAAAA CCATGGAAAGTGTGACCTTGAATGATGGAACTACACTCAGTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023114TCONS_00023114Clytia hemisphaericatranscript
TCONS_00023115TCONS_00023115Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023114-proteinTCONS_00023114-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000443supercontigsc0000443:244782..251726 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14 0.17 0.16 0.11 0.95 1.07 2.23 2.55 1.49 3.03 2.6 1.25 5.02 3.74 3.88 4.89 2.77 3.99 7.16 7.78 3.22 2.88 3.47 3.88 7.66 6.9 16.19 20.18 14.85 11.66