XLOC_013206 (gene) - C. hemisphaerica

Overview
NameXLOC_013206
Unique NameXLOC_013206
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000455:80812..91270+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013206 ID=XLOC_013206|Name=XLOC_013206|organism=Clytia hemisphaerica|type=gene|length=10459bp|location=Sequence derived from alignment at sc0000455:80812..91270+ (Clytia hemisphaerica)
tttgattcaaaatttaaaaagagaatatcaaacgagatattaatataaat
gcttgaatgatgaaaataaactaccgttataaaattttgattgatatGAT
CggataaaattattttcatttttgattattttatagAATAATTCTAAACA
ATACTACTAAACCACACAGAAAGGGGTTTCATTGACCTTTAGTATGAGAC
ATTGAGAAGTCATTATGGCATTTTAGAGGAACTTGAGAAATGATATGTTT
GGTGTTAGCAGAATTTTTTTCGTGTTATTGCTGATCCCAAACTGATATTT
TATCAAGGAGACATACTAAGTGGTACTTACTTTGGTTATTTGGAGAATTT
ACAAAACGATAGACAATAACGTAAACAACCATCATGGATTTCTTGAAATT
GGATATGAAGACATTATTGAGGTAGGTGGTGAAAGACAATGGAAGAGAAT
ATAGATTGAATATTTAAACTTCTCTTAGAGGATTgttaaatacacccctg
ttttacagccccggtggaactttttacctcagtggggataagaactaatt
ttcaaatcccactggggatagaaattctattgttccaaggctaGAAAAAC
CCGGTGAGGGAtaggtttggagtgcaatttttaaactttgtgatgaaatc
aaagtcattttcctagtggggctgaaatttcagggtatctttttaccggg
gacaaaatttttgcctaattttccagtggggtatTTAAATATGGCTATGG
GGTAGAGGACctatttttaactttcttttggAAACTTTAGATAATCTCTT
AGTCACTTTACTCTATGAAgaaacccccttctcacagacccagtagaaCT
TTTTCAACCAGTTGGGTTAGTTGCTTTATACACTGAAAGTCGATGAGGAT
TTGAGTTCCGTGGAATAAATAGCATAATAGTTTGCAGCCAGAATTTCTTT
ATTACAATGATGGTGAAAGCCTATtaagaatttagcttatttccttgttt
ttcgaaatttggaattcgggcgaaaaagtcgattttgggccatttcttaa
atttaatcggatatttcaatttggctcgggtttatagacttccaggctat
attatgagccttattggaccctttttgattttttgaatcctcagatccta
aggtcctaagttttaagtctcatgttaaaaatcagagttaaaactctacc
cttccaacctaagttagagcgcttccaaaccgattgtggttataagattt
cgtgggaatttccctttttttctcaaatattacgaccatgattgtaaata
attttcaaCGGGGACTAAAATGGCTGCAGTATCTTAGCCCAACCAGGTCT
GTAAGAAGGGGTGTATGAAAGTTTTCTCCGAAAAAAAAGCAATAAACAGC
CCAAAAAATTAACCAAATTGGCTTAAATGTTGTCAAAACTTAAAGATTGA
CCATTCTTCAATTTCTAGTGGTATGTACTTTCCCGTCTCCCCCAAGATGA
GCACCCTCCTATGAACAGATTTTAAAATTGGTGTTAGATGTAAAATGACC
TGTAGAGGTACTTTACTTTAGTAATTCGAGACATATCTCAAAGAAAACTC
TGATAGTTGTTAGAAGGGTGCTATAAGATGTGAGAGTCCACTCgccaata
aaaatatttatgcTTTAACACGATATATCTTGTTTGTTTTAACGTCATTG
GTCTTATAATCATAGGAAATAAATAGAACTTGACATTTGAAATACCTAAA
TTTGTTTTTCTCGTATGGTCATATACGTCAAAGCAATAttagatttttga
tattttgaaagcGTAAGCCAAGGTAGGGCAGGTAGAAATTCACAAATAGA
GATTTATATGTTCTTTTGGATGtagagttttgatttttcaattttacttt
ttgtttttgaagtaGATAACACcgccctcttctcacagacccagtggtcT
GTAGGGGTATAAATAGcgaactgaaactcgatggggatcgatATTCCCTT
AACTTTTATGACCAGGGattcaaattcttttgttttaaagtcagAAAAAT
TCAGTATGGATGGTAAAGTGGGGACGAAAATGggggtataattttccacc
gggaacgatattttggccaatttttccagtggggagggttggcagtgggt
ctgtgagaagagggtgtggTAGAGAGAGAGGCTTAACTTTTCAATATCCA
TCCTCTCGATCCATCATAGGGAATAAGGTAGCCATCTCTGATACATCCTA
TCAACCCTTTCTAAAAGATCCCTGTAAAGGGATTGGATTCGAGTTTGCCA
GGATCGTCAAATGTGTGAAGTTATTGAATTTGTGTACTCACCCAAATACT
GATATTTTGCAGTCATTTGACTCTGGCTTAATTAAACCCAGTTTTCTTGT
GACGCTAGGATTATTGGGTTTATTGAAAACCTTAATGGTGTAAATAACTC
AATCTTTTTAGAATATAGCGTGGAAACTCTTTAACTTAAACCACTATAAC
TCAAATGCCTTCTTATAGAGAACAAGCTTTCTAGTTCCTTCAATTAACAA
AACCTCACTCGATATCTCGagatttttttaactcaaacctTATTGCGTTC
CTCATCTTCGAAATGTGGAGACTCCGCACGCTTAATTTGCTCTCTGTTAC
TCGTCCTTGACAGAGTTCACAAATTTGTCAGAGTTAAAACCACACTTTTA
AAGGCTGATAGATATATTATAGATAGATTCTAGTTACAGAGGTTCGACCT
ATGGAGAGCGTCTACCATATTATTGTCCTATAATGTCCTTTTTTTATAGA
TCTGGAACAATAATGAATGCAAACGAATTGTATATCACACTTGCTGCCAT
TCAAGGCGAGTTACAAAATACAGTTGGCGAGTTGTTTGCTATGTTTTGCC
TCGAAAATAAAGATGGCGGGGAGAATCGACATGCAACACAAGCTTTCAGT
ACTATCTTGAAGAAATGTAAAGATTTGAATCAACTCGAAACGCTGGAATA
CGGTTTCATTAAAAATCGTATTTACGATACCAATGATGAAGGAGAAATGG
TATTACGAGAtgaaatcaatttgaaaattcTGGACACTTTATTTTTGTAT
GACTCAATGAAAAACTTGAAAGGTTTTCCAACATTTCAGGAGAAATTACA
ACACAGACGCAGGCTAAAATCTTGTAAACAAGCTTTACATCAACAGTGTT
GTTTAGCCTGTAACCAcaaatgtaaaaaatgtgatAAGAAAGAATGTAAG
GATGATTCTTGTCATCCAGgggctaaatgtaatcaacacCCCTGTCGCAA
TTGTGACGAAACTAAGGAAATTTGTCTCCATTCTTCAAGTATATGCTGCA
AAAAATGTGAGACTTGTTTTTATTGTGGCTCCAAAATGAAGTTAGAAGTT
AGCGAACGGTGTAATAGACTACGGCTAACATGTGGACTTGAAACATTGAG
AAAATTTCGACAACTTTTagagaaattgacttttaaaGATTGTGAATTGT
TGCTAGATGGTAAACATACCTTACCGGGTTTCCAGCTCTGTAGAAGTTTC
CGAGAACTTTCTGATTATTTGTTGAAAGCTTATAAAGAAGTTTTGAATTA
TATGTCGATCGCAGAACATTTTATCAAACAACAACCTCTTTCTtctaaag
atattcaaaagaaAGTTGACAGCCTGGCTACAATTTTTAAAACGGAAGAT
CGTGATTGGCTGTTGTACATGCagcatgatgacgtcattaagaTTTTAGG
ATTCATTAATGAAGCTAGAGCCCAACCCTCTGAAGAATATCATTACGTCA
TcaataaaattgaagaattgaaatcagACGAGAAATTTAAGAGACACAGG
AGTGAAGTTATGGTCGAACGTGAAAATGGGGACTCTACTGGCAGCTTATC
AAGAGATGTGAATTTTAACTTGGAAAGTGTAACcataaatgaaattgaaa
attctaaaagtgaAATCGAGACAAACGAAAACGAAGTCTTCGAAACAGAG
ACTTTAAATGAACAGCTGATAAATAATGATTCACAACAACACGAGGAAGA
CGTAGCTGTTGCCAAGGTAACCGGAGAACATGAAGGCGAGGCTACATCAA
CTGATGTTACCGATTCAACAACTTTAAAACCtgaattaaaagaaaatgag
ggCACTGATGTCACCTCGGCAGATTTCCGACCTGAAGAATCAGCAAGAAG
CAAATGTGAATCTCCAGTCGATTATGAGTTGAACAAACAACCAGATTCTA
AAACGTCTATTCATTCTAGAACCGACCCAGAAATGATTGAAGTCATCAAC
AACTTGCAACAATCAGTAGACGAGCTGAAGGAAAGTTCAGTGACTTATCA
AAAAGANTAACAACTTGCAACAATCAGTTGACGAGCTGAAGGAAAGTTCA
GTGACTTATCAAAAAGAACTGGATGAAAAATTACAAACTTTTGAACTTGA
ACATATTGAAACATCATCTAACGTTGAGGAAATGAACAATAAAGTGCTGA
GTCAGCTTTCCGTTGTCATGGAGAAGTTGGTTACCATGGAGGAGCAAAGA
AAGGTCGAAGCGGAACGGCAACAAGCGGAAATtgaagaaatcaagaaaaa
tcagaaaaagttgtTAGAGATGCTTGAAAccaaacagaaagaaaaaggTA
TTTTATCTTCATGTTTCTAAATTTCCTCACTTTTTAGATACTTAACTTGC
ATGATAAAGTATGCTAAAGACTTTTCATCTATTGATGTCCTTCGCGTTGA
TCTTACATATGCTCACATACACTTTTTGCAATGAACCCAGGGTACTGCGT
TTCTCGACGTTTGCAAGGTAACAGGTATGTCcgagtcaaaaatcaaaaat
caatacCATTTAACGGAGAGAAagatttgacatttttgagaccTTTTGAG
GAGACTTGAAAAagggtacccttatggctctcACATCACATACCCCTAAC
CTGTACTCCCCTCCCCTGCAATTAACTTCTAAACACAACTTAAACCAAAA
CACTCAGATCCTTAGTTTTTGCGTGTTATTGATAATTACTGTCATGACGA
GTCTTTATCCATTCATTGTAcctaaattttgactttcatTCGACATTCAA
TTCGAAATCCATACACTCATCATATATTCACACCTTTATCCCAATTTTAT
TTATAGCTTCCAAGAAGAAACATAATATTTTCAAGCACAAGTAAGTATAC
ACTTGAACCAATATTTTTCGTTCTAGACCAAACAGCTTTTGCGTCCGGAA
AATGATTTGTGGGCCTTCAAGGTTTGAAACTTGAGCTTCTTCATGCCGCA
CTATTATTACAACCATTCACTTGACTAGATAAGATCATATCAAACTGAAG
TTAAAAAATCAGTGGATAAGAAATTCTATCCTCTTTGGCTTCAGGGCACT
GACTAAGCACCCTCCACCCACAAACTCGATATTTTCTTGTGTATTGCATA
AGTCATGATAAaacaatttctaaaaaatcctatccttagaccatgttcag
acgttacggttccgtatcgttccgtatcgttccgaaacaaaacggttccg
aaacaagtgtgaacgtcaaaattcgaaacgtcagaAAAGAaaacgttaca
aagcaaaacagattgaAAAGGTTTCGCTTtgttcatcggaacggaactgc
tccgttttcttgctccgaaacgttccgaaaccaatatgaacataCACTCG
ATTCGTAAAATTATACCGGAGcgagtaacgtgtgaacatggtcttagcag
agatttgggaaaagaggataagaaacgccgctgccgctcgctgttttcct
attctttccctttgaattcggcaccctttgaagaagcaaggctgcagaat
agttgagcaagaaggaaggccgaaacaaaatggcgttacgtacaggttaa
ccaatgttcaagaaaaaagtccTTGAATAAAGCTTTCCACTGAGTTCTTT
GTGAAAAAGAGACTGGGGAGTGAATCTTTGATCTTCTGGGGGTTTCCCCT
gagaaaatcgaggaaaatTATTCTATATTCTGGGANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTCGACATGT
GATATTTATAAAGTCTGACTATTGATGGGCCATGATTTTGACCGGTCAGT
GGATTGACTCACAAGGCTTGGACAATTTTGCAGCCAAGACATAATTTCAT
CGGTGAACTTTACAGTCTGTGTTAGGGTAATTAATTCATGCAGATTATTG
CTTATACGAAAACAAAAAAGCCCTAGTTTTAcagtagattttcattttat
atattttcagggCTAGTTATCGTCATTTTCTCTATGAAATACCTATTGTT
TATAACAACGCTACCCAGAAAAACCATTCCACAGAAAGTTAAGTATGGGC
TATTGGCCATCCAAGCACTGGTGCAATGAAGTAAAGATTGACTCAGGATG
ACtcaacatttttgcattttgaccGTCACGTTAAGGCATGGAAAAGTCtg
ccaaaaaatgaaattaaacctGCAGAACCTATATTACGTGCATTATTTAG
CTTGACcaaaacagaatggaataataAATATATGCAGAGGATGTTAATAT
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTCTTAGTTGAGGAA
TATACTAAACACTTTTCCTTTAAACTGCTCTGAGTAACTACAATTAGTAT
AGTTTTGTTAGTTTTTGGGGATGatccaaaaataaaatataaaatataga
aatatatAGCTCAAAGTGTCGTAAGTTGTAACCACTGGCAaatgccaaaa
tatttcttcgaCTGACTATAACTTTTCATGGTGTCATCTTCTTTTCTTCA
GAGTCCACTAAAAGCAAGTTTACCAAAATCAATATGCTATCATCGTGCAA
ATGAACAACTTCCCTGGTGAGAGGTATTATTATTAAGTGCAATGGCAAAC
ACGGCGATCTTCAATCGGATTTATCGCATTcaataaaaagtttaattttg
gttgtgaagaaaaattaatgaagttgaaaaaaaggatttttcctTTATCC
GATACAGAACAATTTAAATCGTAGGATAGAGTTATTTTATCGATACActc
ttttttgtataaaaacgaTTATAGGCAAGCGATTATGTTAACTGGAAATT
CGGTCTACTGTTTTCGAGGATCAATATGCCAAACGATAAGAACAGGTGAG
ACTCAACTAAAATTTTAgtcgttcttataaagaaaagagTGTACTCATTT
TTAGATTTGTAAAACTGAAattattttaatctaatgaaagAATTTTGTGT
TTATTTCTTagttatattttaattttattttagttaaaattttttagTTC
TGAATTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023490TCONS_00023490Clytia hemisphaericatranscript
TCONS_00023491TCONS_00023491Clytia hemisphaericatranscript
TCONS_00023492TCONS_00023492Clytia hemisphaericatranscript
TCONS_00023493TCONS_00023493Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023490-proteinTCONS_00023490-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000455supercontigsc0000455:80812..91270 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.02	0	0.02	0.18	2.17	1.95	1.38	1.58	1.03	1.48	19.27	16	10.74	5.86	4.59	4.51	1.42	2.98	3.99	3.71	1.22	2.54	5.1	4.81	7.78	6.81	5.99	6.28