XLOC_013384 (gene) - C. hemisphaerica

Overview
NameXLOC_013384
Unique NameXLOC_013384
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000462:176760..180184-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013384 ID=XLOC_013384|Name=XLOC_013384|organism=Clytia hemisphaerica|type=gene|length=3425bp|location=Sequence derived from alignment at sc0000462:176760..180184- (Clytia hemisphaerica)
GAAAACAAATAAGTGGCCTCACGATTTAACACTAATTTGTTGAAGAACTC
CTTCAAAATCAACGTGTGTCAAAATATAGAAAACATAGAAATTGAAGATT
ATAGTGTGACCATTCCATACATTCAATTTATTGAGTTTTAGGGAGGGGGG
TGTAAACGGACTATGCAAAGTAATATAAAACTTTCAAAATCGGATCTATA
GAGATAGATTTGATACAGTCAACAGAGTTTATCAAAATGAAGGTGCTAAC
TTTTTTCATTGCAGTACTTTTGGTGGTATTTGTTTCAACCGAGGACCAAG
GTGCCAAGGTTAGTTCAAACCATGCAGTTATAATTTCTTTTGTTGTTAGG
CTACCCAGGGCCCTATGTCAGTTCGGTAAGTCGCACCTAGTTTACTAGGA
AAATAAAATCTAAGGATGAAAAGTTTACTTTTGAGCTGTTCTGCAAAATA
CACGTGATTTTGAGACCCCGTTCATCACTCTGCAACCGTTTTCTTGGTTC
AAAGGAAAGTGTTGTCAAATTTAGCAACGGAAAAGCGGCGAGATTTGACA
ACGTTACAGAATTTGACAACGTTGCAGAATTTGACAACGTTGCAGAATTT
CACAACGTTGCGGAATTTGGCAACGCTTAAGCTACAGTACTTCACAGCGC
TTCGATTCTTTGTAGTTTCTGCTCGAACTGATAGATGTAAAAGGTTTTGA
GTGTAAAATGTTGAGCGATTTTATTACATGTAGAAAAACATTCTTCTCAA
ATTTTACGATGTTTACTGTCATAATAATACACCCCTATCTCACAGCCCCG
GTAGAAGATTTTCCCTCAGTGGCGATGAAAACTTATATTGAAATCTCAGT
GGGAATAGAATAGAAAATTCCATTGTTCCTAGCACAAAAATTCGAGTGGG
GATGGTTTTGGAGTGCAATTTTTTCCATTAAATTTTAAGTGAGGATTAAA
TCGATTTCCAACTGATGCTGAAATTGTAGGATATTTTTTCAACTGAGGAC
GGAATTTTTGGCAAATTTTCCAGTTGGGCTGGGTCCCAGCGAGTCTGTGA
CACAGGGGTGTAATAATGCAACTGTATGCCCGAAGAATAGAGTAGAGAGC
GATTTCTATATTCATGTAAAATGTTTATGCTGATTTTATTTTTCGTAAAG
GATTATTTGACGCAATTTGGATTCCACGACAAACATCATTTCAGTGATGC
AGATCTTACAGAATCAGTACGCCATTTCCAAATTACTTTCGGCTTAAACC
CTTCCGGAAAAGTAGACAAAGACACACAAGCATTAATGAACACCCCAAGA
TGTGGACGACCAGATAACGAATATTATGGAGATTTGAACTATAATGCTTA
TTACCAACCGAAATGGAACAAAAAGGAATTGACCTATTATTTTGATAGCT
ATACAAATGATATTGATAGAGATGATCTGATTCGAGAAACAGCAAAGGCA
TTCAAATATTGGTCAGATGTCAGTTCATTGAGCTTTAGAAGAGTTGACCG
AAATGGTGATATTGTTATCGCGTAAGTTATATGATTTTCTGATCCTGGGT
TCAAAAGAAAAGTTAAAGGTTTTGTTTTTAAACAAGAGTGATATCGTTTG
CTTACTCATCAATTTTAAAATACAACATACAAGCTTTTTGATATTGAATT
GACACGGATGTGGAGTGGAGCAAGGTTGATCAGAAAGAGGAAAAGAAACG
GACTGTAATGGTCCATTTTCAAAGTCCTATTTTGGGCCGCACATACGGTC
GTTTTTTGAATCGAGTGACCATGAGTAAATTCTAGTATTCAGAGGGTCGA
TTATATGATTTCCCGGCTTGAATCACACATCCAGGGGATGAAAAATCGAA
ATGACCAGTGATATGATAAGTCGACTTCTTTTCTGGAAGAGCCCAGATTT
TAGAAAAAAGATTTTGGTATTTAGATTTGGTGCAAAATCACACCGTGATG
ATCGAAGAGGAACTTGTCGAACATCATTTGATGGAAAAGGAAAAGTTCTC
GCGCATGCGTTTTATCCAAAAGATGGTCGTCTACATTTTGATGATGATGA
AAATTTTGCTATCACTAAATGGAAATTCTGTAAGATTTAAGTTTTTTCTC
TCTCATAAAGCCTTTCGGGGTAGTGGGAGGGGTAATAGGGTTTTCCTTGA
AGGAGAATAGTAATTAGTTCGAATCATAGAAAGATTTGAATTATGGAAGT
TCGAATTAACAAGAGTCAACTGTATATATTATTTTTTACCTTTTCTAGGG
GCAACAAGTTACCAATGGGTTGCTGTTCATGAAATTGGGCATATTCTAGG
TTTATCACACGACACACAAGATAAGAGCGCTATTATGTATCCTTACTATC
GTGGTCTTTTTTCTAAATTGAAGCTTGGTTCAAGTGATATCAGAAGAATT
CAAAATTTGTATGGAAGNGAGTGATATCGTTTGCTTACTCATCAATTTTA
AAATACAACATACAAGCTTTTTGATATTGAATTGACACGGATGTGGAGTG
GAGCAAGATTGATCAGAAAGAGGAAAAGAAACGGACTGTAATGGTCCATT
TTCAAAGTCCTATTTTGGGCCGCACATACGGTCGTTTTTTTGAATCGAGT
GACCATGAGTAAATTCTAGTATTCAGAGGGTCGATTATATGATTTCCCGG
CTTGAATCACACATCCAGGGGATGAAATATCGACTTCTTTTCTGGAAGAG
CCCAGATTTTAGAAAAAAGATTTTGGTATTTAGATTTGGTGCAAAATCAC
ACCGTGATGATCGAAGAGGAACTTGTCGAACATCATTTGATGGAAAAGGA
AAAGTTCTCGCGCATGCGTTTTATCCAAAAGATGGTCGTCTACATTTTGA
TGATGATGAAAATTTTGCTATCACTAAATGGAAATTCTGTAAGATTTAAG
TTTTTTCTCTCTCATAAAGCCTTTCGGGATAGTGGGAGGGGTAATAGGAT
TTTCCTTGAAGGAGATTAGTAATTAGTTCGAATCATAGAAAGATTTGAAT
TATGGAAGTTCGAATTAACAAGAGTCAACTGTATATATTATTTTTTACCT
TTTCCAGGGGCAACAAGTTACCAATGGGTTGCTGTTCATGAAATTGGGCA
TATTCTAGGTTTATCACACGACACACAAGATAAGAGCGCTATTATGTATC
CTTACTATCGTGGTCTTTTTTCTAAATTGAAGCTTGGTTCAAGTGATATC
AGAAGAATTCAAAATTTGTATGGAAGATAATTCTTGTCACTGAAATATAC
ATTTTAAATACAAAGAACTATTATACTTTTAACTTACTTGTTATGTCCTG
CTTTAACTATTCCATTTAAAAATATACAAAAGATGACATAGCCAAACTAA
TCTCCGAGCAGATTCTCTAAAAGTCATGGCTTCTGCCCTAGAATTGAGAA
TCTGCCCAGGTTGGCGCACCGCTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023827TCONS_00023827Clytia hemisphaericatranscript
TCONS_00023826TCONS_00023826Clytia hemisphaericatranscript
TCONS_00023825TCONS_00023825Clytia hemisphaericatranscript
TCONS_00023824TCONS_00023824Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023824-proteinTCONS_00023824-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000462supercontigsc0000462:176760..180184 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MMP7matrilysin preproprotein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.08	0.24	0.34	0.18	0.17	0.15	0.15	0.15	0.1	69.88	75.4	28.19	68.61	24.1	35.66	433.32	521.27	195.44	181.46	57.04	76.82	28.55	23.63	0	0	0.12	0.2