XLOC_013557 (gene) - C. hemisphaerica

Overview
NameXLOC_013557
Unique NameXLOC_013557
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000476:196026..205734-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013557 ID=XLOC_013557|Name=XLOC_013557|organism=Clytia hemisphaerica|type=gene|length=9709bp|location=Sequence derived from alignment at sc0000476:196026..205734- (Clytia hemisphaerica)
CAACAACTTAGTACCGACCCCCCTCCTGGTCAGAATCCACTCTGCAAGAA
TTGTAGCCTGGTGTCCTAGAGATTGAGCTGACCTGAAGAGGTAAGCACCT
TTGCAACTCTAAATTATTTCTNCGACCCCCCTCCTGGTCAGAATCCACTC
TGCAAGAATTGTAGCCTGGTGTCCTAGAGATTGAGCTGACCTGAAGAGGT
AAGCACCTTTGCAGCTCTAAATTATTTCTACTTTCATGTTGGGATTTGCA
TGCTACAAAAAAGGATTTGTAAAAGAAAACTTACCCTGCCAAAACAGTCA
TAATGAGCACAAATGATGTCTCCCTTACCACCAACCACAACCCATGGTCA
AAGATCTTTTTCATTGAAGGCTTCTGAGTGTGAAACAGCTGTTGTTTGTT
GTCTGGTGATGCACAGGTCCCACCAAACCTGATTCGAATTGGTTATATAG
TCCAGTCCAGCTTTTGCGGGACTTCATTGATTCCCTTGTGAAGATATCTA
CAGTAATAAATTGGGATAAAAAATTTCTGATTTTTTCATAAAGAAAACAT
TAGAAAAAAAAATTGATGATAGTTACCTGGCAAATTGATCAAATAATCAT
AGATTTTTGGATACTCCACATTTGGCCTTTGTGTTGGATCTTTCCCTTCC
AAAACCATGAGATCTAATTTTTTCCTGTACCTCTCCTTTGACTCAGGTTT
TAAACTTGAAAAATAATTGTGTCCTTCATCAACAGAAGAATCCAAAAACA
ATGATGGTACCCATAAGTGACGTCATAAGTAATCGGCTTATAAATTATTT
TGATACGGTCCAAGTGGCTTTACCCTGTTTGAAAGTGAATTTTGACTTTC
ACTCATAGTCAAGTATCTGGAGGTTCGAATTTAAGGATATTTAAAAAAAT
GTTTACAACCTGGGAAAAAGAACCGGCGTAAAGTAGCCATTGATGAAATA
TCAGTCTGCAGAAGGAAATTTTATCAACCAATGAAATCCGTTCTTAGTAA
TGCTCACCACAACTTGAATAAAAAAATAGAGGTACCCTTTATCTGAAAAT
TTAGGTGGAATTTGGAGCTGAAACTTTTTGTGCTGGAAGTAAAAGCTGTC
TATAGTTTTCTTCCCTAGCAGTGATGTTTTGTAGAAACCAGTTTTCAGTT
TTTCACGAGAGAGTGAAAAAAGCCCTTTTAGATATATACCCCTTGAAACC
TACAAAATGGTTTTTCTTGAATAACTTTATTAAATGCTCTTTTTGGTCTC
AAATTTTGAACAGTGATTAACTGCAAAGTTACTAGTGTTACAATTAGATT
ATTGGTCCCATCATATTTTCAAAACTGTACGTTTAAAATCAAAATGCAAC
TTAAAACCACTGGTATTAATCTGATATTTTCTAAGTTTAGAAATAAAATT
AAGAAAATTAAAATGGCCCTTGTTGCAGACAGTTGTGAAATCACTTCCAA
TGGTTTTTTACATGAGGTATGGCAAGTTCAACTTTATTGCCTGATTTTAA
ACATTTCTGAAATTTTTTTGTATCAAAATGTGATAAGTGCACCGCTTTTT
CTTCTCATGTTTGAGTCACCTTTGCTCGGGATTATCTTTTCAACAGTGCA
ATTTTTGTTGCAATTGATTCATTTATTGAGAAAGCTAGAAAAAACGAAAA
TTAGTAGACACTTATAATATGAATGGGTAAGGTTTTGAAATTAAGGTCTA
AGTAATTGAGAATTCCAGAATAAGTTTGTTTATACCGCAACTTTGTGTAA
TCCTGACATACCTTGTCTAGTTCCTTCATAGCAAATATCTGGTCTTTAAA
ATGTTTATAGATAAAACCTTCATAATACTAGCTGTTTAAAAAAATCACTC
AAACTACTTGTAACTATGGTGGAATTAGACAAGTTATATCAACATTACAC
AAAGCTACGGTACCCAACAAAATTCGTATTAGAAGTTTTATGGCGTCTTG
GATTACAACTCAAGATATGTTTTCTCCACTATTTAATTTTAACTTAACTT
TTAATTTTATGGATTTTATTTTCTTTTTATAGATTCTTTTCATTGCTAAT
ATTGGTATGCTTACATCACTGTTATCGTAAGTAGCAAAGAAGCTGTTAAT
AGCAATTATAACTTCAGAACATTTTTACCGTGAAATAATATTGTTTTTTG
ATTCAGATAAAAAAATTTTATTGAATATTTTTTACCATTTTTTTTACGTT
TTTAGAATGATTGCAACATTTATGATCATCACCTATGTTTTTTACAAAGG
AACATTTTCCCTCCCAACAGTGAGTGCTTTCATTCTGTCCATAAGAGTGA
AACAAATTTATTCAAATTGATTACCTTGTAATAATATCCTAGGTAGGCCA
GACCAGGTTATCAGTTTTTCAGCAGAATGGAACTCTCATGGACACTGTAA
AAAGTTGAAGTCAAGTGCCTGTTAAATTTTCATTCTATTAAATATCTTAC
TGGTTAGACATAATTTAATTCATGAAGTCCTGACTTACTCTCGGATACCT
AATAGCCGGGGGGATTGGAATAAGGGGGGGGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GGGTTGGAATAAGAATGTCCTGGGTGGAAAAAATTTTCGAAAAATTAATT
AGCGGGGGGGACGGCTATTAGGTACCCAAGAGTAGCTAAGAAGCAGGAAA
AACAATCCTATGAAAGCACAAAGTTTAGATAAGATTTTGCATTGTTTCAA
ATTTCAATCTACACATCTTGGACAAAAAAATCATGAAACAAAAAACAAAA
CGGAAAACTACCTTGAAATTCTCTAATTGTCCTTCCTTGAACAGGAAAAG
TCTGGAGTAATCACTGAATATATATTATTATTTGTATCATTGTCAACAGT
ATATATTTTATTTCTGCTCAAAAACAGTAGAACCAAGTCTAAACAAGAAT
CTACTCTTTGATGTTTTTTCTCATTTGATAATTTTATGTTGTTTTGGTTT
CTTTCTTTTTAGGTCAAACCATTACTTCATCTTACTATTGCTGATTTTTT
CCTTTCTTATGTTTGGTTTTCTTCGAATCTTGATTATATGAGCAATAAAA
ATGCCAATTACACTAAATCACTTGCAAGGCACTGTCTTGTTTGGCAAGTT
CTTGCAGAGGTATTCTTAAGCAATTATTTATTCAGTCTGTTAAATTAATA
TGCCAGTAGTTAAGTGGATTTCTTCTGTGTTTAATTCTTTTTTTCAGCTT
TTTTTCCACATCAATATTTCTCAACACTGGCCAAGTTCGATTTTGTTGAT
TTTAATGTTATAGTTTTTTAATTCAACTTTTAGCATTTTGAAAAGAAATT
TGTAAGAAAAATAATTTATTTTGTCACAATTTTTACAAAACTTCTCGTAA
AATCACTGTAGGACTGTACCTATTTAAAAAGAATGTTCAAACGACTTTTA
AGTGTTTGTTCAGGTTTGTTTCTTTATTTCCTCATTCGATTTTCAAGTAA
TTTTNTGTTTGTTCAGGTTTGTTTCTTTATTTCCTCATTTGATTTTCAAG
TAATTCTTTACCGGTTTACTCAGGTTCTTCATTTAACCACATTTGGTTTC
ACAATCAATTATTCAGTCAACATCTTCCTAACCATGAAAGAGAAAACACA
ATTTGGTTATGTTTATGCTGATGTAAGTAAAAGCTTTGTTTGCTTATGAT
TCTTAACTTGTCAATGGCAGACTATCAATTACAACCATATCTACTGTTAC
TCTAACTGATTTTTTTTATACATGACACTACTCTCCTACTTATAAAACTC
TAATTGCTAGAGTCCTAAACTGCTGATTTACAAGCACAGGCATATGACAA
ATTGATAAGCAATAATTTTCCCATCAACTGACTCAGACTCAAACCTAGGG
TTAGGCGACCGACAGCATGCAGTTTTGAATTTACTTTGTGGTTTTAGTTT
CCTATAATGCAAAAAATATCATTTTCCTATCCCTTTCGCAGATAATCAAT
AGTCTATGCATGCACAAACTACACCTTGTTTTTTTGGATTTCCCTTTTGT
AGCTTAACGTACAGCACCAGGTGAGCACAGACTTATTGACACACACATAC
TCTTCCACGACAAGTAAAACTATCTACCTTATTGGAACTAATTTTCTTGG
GAACTAAATTTTGCAGTCGAAAAAAATATCTGAAAAATTGCATTTCCCGG
GTTTTAATTTTCGTGGTTTTTTCCATTCTGGAATTTTTGCGGGTTTTAAT
TTTCGCAGTTTTGCCCTTTTTTTGGCAAATTTCTTTCATTTTCCTGGGGA
TTTTTCAAATTTTTTGATAAAAAAATTGTATTTCATGGGAATTAATTTTC
GCGGTTTTCAACGCTCAAAATTTTTTGCGGGATCAAATTTTCATTTTCAT
TTTCATTGACGAAAAACCGTGAAAAACGCTAAAATTAAAACCCGCAAAAA
TTATTTCCAATAAGTTATTACCTTTATGCATGCATATAAGTCTATACTAT
TAAACTCTCTGATGACAATGGTAGATCAATCTTTTACATTAGTTAAGTGA
CGGTAGATAAAATACTCCTTGTTTTTTCTTTCTTTCTTGTATAGGCCAAT
CACCAACAAAGAGTTACTGAACGAGTTGATAAAGTCAAAAAAGTCCTTTA
CTATATGTTCTGGTAAGAAAATAACAATTTAGATTCTTTCAGTGTTTAAA
GCTCTTCCATCTTTGATGGATTTTCCTCTCAGCTAAGTATATCAAGAGGC
TTTTCTATCTCAAAATTCTGCATAATTCACCAAAATTTTGAGAATATGTG
ATATTTTTCTTTGTAGAATCCCTTTTTCAACTCAGACGAAAAGCGTTGCT
GTGATCACCGTTTTTTATATTTTATTGGTCAATAAAATAATGAGTGCTTA
AAAATATTGATTGCAAATCGGTTCACATTTTGACAAACATTTTGAAGAGC
TTTTAAAAATCTTTATATTGTAACTGTAGGATATTACCACCACTCTCAAT
GTTACCAATCTTGTCAAAGATAGAAGATAAACATATCTGTTTATGTGAAA
GGTTTGGATGATAGGCTTTTATTCATGAAATGAAATGTAAATTTCTTTCA
CCAAATTATACTTATTCAATATCAATTTACCACATCATCTTTTAAGCACA
GACCAGGCCATGTTTTAGAAAGGCAAGGCAGTGTCCGTTGGTGACCAAAA
AGGGCACTTTTTGGGTCAGGCTGTTTTTACCAATATTTTAGTAATTTCAA
GAGGGGCAGCGTCCGATAACCGAACGCTTAAAGGGCATGAAAAATGGCCT
GCAAACTTTATATGGTTAGTGATATGCTAGTATTACCAGGCATGCATATA
TTTCATGCACTCAAGAACCCTCATAGCTGAGGATACTTTGATTTTAACAT
GATTATCTTTTCTTTTCAGATGTGTCATTTTGATTGATGTTCCAAGATTA
GTGGTAAGGTCTCTTCCAAGACTTATCAATAACTTGTGCTAACTTCATTT
TTACAAAACTTACCAAATAAAGTCCAGAAATTATTTCAATATTTGTTTTA
CCAAATGTTAGATGATACTGTGAGAATCCAGATTTTTTCATTTAATAAAC
TTTTAACTTTCATTTCTAGCATTTAGATTTGTTTTATCAATCTTATGGAT
ATGTATTATTGGCATGTGCATTAGTAGCATCCATGATAAGTGTTGTGGTA
CGTTGTAAATTTTGTGCTACATAGATATTTGCCTGACCCGAGGTCATCTA
ACTCTAAACAAGAAATTCTTTAGCGGGACATCATGGCCCCCGGTGTGCTA
ATCGAATTGAGGGTGCCAAGAAAATTTTCGACTTTTCACCCTTATTTCAT
CCCTCTAAACGGTATATATAAGATTTTTTAAAGTAAAAGAAAACTACTTT
GCAAAATATTGGTCCATGGACATTCATGACTATTGCCTCATTTATTCAAA
ATCTCTTCTCTATGTAAGTCCTGCAATTTTAAAATACTTTAATTAAGAAT
TGTTGTTGATAATCAAGCTAAGAAAGTCAAATTCTGTCCTTTCTAACAAA
GATACAAGTTCCTCTAAAAGAGACTTTTCTTCTATTACTTTTTAGGTACT
TTACATCTTAACACTTAGAATGTATTGGAAGACAGCTCCAGGTTTGATCA
TTTTAATACTTTACTTCATTTGAAGGAAGACTTCCTTTAGTTAAGTGTAT
CAAGTGTTGCATTCCTCTTGATCAGTATGGGTAGTTTATATATTGTGTAC
CGGTAGGAATTTCTGTATAATTTTAATTTCATTTTTCTTTAACAATAATA
ATAAGCTGGAACTAACACGCATAATACTAACCATTCTTTCTTTCTAGGAT
ACTGTACTGATCGAGAAAGGAAGAAACTGAAGAATTTACAACGGAGGATT
ACGTCATATGTTGTTGTATTCTTGATTTGCTGGTTTCCTGGTATAATGTT
TAAATTTTGCATGTTTTTTTAGTTATGTGTCTCCCTAAATTGCTACATTT
ACTGTCTGCTTCTTGCTTATGGCAACAAAAATTCAACAACGGAAAACGCT
TTTTCCAATTTAGAATAGATATAGGATTCTTTTTTTATTCTGCGTACTTG
ACATTGATACTGATTTGCATGGGACTGATGTTATCATCACATAATGTTGA
TGACCAGCAGGATGATATTGTGGTCAATTTTTAATCTGTCTAGCACCTAT
TTTTTAGCTTTGGCCATCTCAATAATGAAGAGTTACGAGATGATGTATTA
CAGAGGAAAACGACTGAAACAAAGAGATATAACGCAGTTTTATTGGTTGT
ATTTACTGCAGGTTCTTATAATTATTGATTTCATCATCATCATTTAGTTT
TTAAAGGTTTTTACATTTTTTTTACTACCGCTTCCGTCATGTGATTTTGT
CTGTTTTCCCTGCCCCTGTTACAACTCTATCTAACTGGAAGTCTCTAAAA
TAAAAAAAGCTAAGAGTTGTCTTGTACTAGCAGCATCTCTGAACACTTTG
CGACTTTTATTATAGGCAATCTTGACACCGCTTCAAGGTTTTTTCAATAC
AATTGTGTATGGATGGACAAGACGGTCATTCAGAAGAGCATCTAGACCGC
TCTCTGAAGAGAAAATCTTTTTTGCTGATCATGAAACAGACTCTGCTTTG
TTGAGAAGTCCCATTGATAGTGAAGTGGAATTTAGCCAATCGTCTCTTCC
AGCCTATGGCAGTGATGATGAGGATTAATGGAATAATATATCTCAATCAA
AAAAAGAAAAGATGTGTAGAGAAGATCATGTGACGATTTAGCCACGACAT
TCAACATCTTTCATATCCAATTGGACCTTTAACTGATCAATGAACTTTGT
TTTGAAAAAATCGCTTGATCTGCATCGATGAATTGTCAATTAACCACTTG
GAAGATCTATAGCTAGAATGAAACACTCATAAATGAAATATATATAACTA
TAAATTATACTGGCACCTTGAGTAATATCTGCACTACTTTGGTAATATTT
AAAATTAAAATTTCAAAAGGTGAATCAAAAAACTTAAAAATACTTGGTAA
ATTAAAGCAACAATTTTTTAATTGTCAGTGTTAAATAATTGTGGTTTCCC
ATGGTTTCCAAAATTAAAATCATATTCAGGTAGTTATATAATGTTTTATT
AACTGGTTGAAGTAAAAGCCGGTCAATACAAGAAAATGCGCTATTTTAAT
TGGTTCTCTAGCGGTCAATATAATACGGTAAAGACCACTTCAATGCTTTG
GTCAAACTGACGATGATTTTGAAAAAGGAAATTTGTTTTATTGAAAAGTT
TCGTCAGTTTAAACATGATTTAAAAATCTGACGTTTCAATGAATTCTCAT
AAGAAAGTGGTGTCAGAATAAATTAAAGAAAATATTGGGTAAAAAAGAAA
CAAAAAAATCATGGAAAATGAGTGGAAAATGTATTTTTTTGGCCAGAAAC
ACACAAAGAGTGTTCACCAGTTAATAAACACAATAATAAATGGTTTGGAG
GTCAATACGGTAAGATATTGACCGCAGCCGAAGTACACATTGTGCGCAGG
ATAATTATTAAAAACTTAATTTGATGAATGTTAATGTAATGTATAAGGTG
AACAAAGTTCAACACATAGAGCTTTCTTTATTTCAAAATTTATGTTGAAA
TTCTATAAATTAGAGTAGTTTTATGTACTACTTTCACATAACTTATTTGT
ACTTTGAGTAACAAACTGTACAGCTTTGGAATATCTTCGAGCACTTTTAG
CACTAAGAAGAACCAGAATTATGTACTATCACATATAAATGTTATGAATA
TAAAAAGAATCTGTCTGNCCACTTGGAAGATCTATAGCTAGAATGAAACA
CTCATAAATGAAATATATATAACTATAAATTATACTGGCACCTTGAGTAA
TATCTGCACTACTTTGGTAATATTTAAAATTAAAATTTCAAAAGGTGAAT
CAAAAAACTTAAAAATACTTGGTAAATTAAAGCAACAATTTTTTAATTGT
CAGTGTTAAATAATTGTGGTTTCCCATGGTTTCCAAAATTAAAATCTTGT
TCAGGTAGTTCTATAATGTTTTAAAAACTTAATTTGATGAATGTTAATGT
AATGTATAAGGTGAACAAAGTTCAACACATCAGAGCTTTCTTCATTTCAA
AATTTATCTTGAAATTCTATAAATCAGAGTTTTATGTATACTTTCACATA
ACTTATTTGTACTTTGACTAACAAACTCTACAGCTTTGGAATATCTTAGA
GCACTTTTAGCACTAAGAAGAACCAGAATTATGTACTATCACATATAAAT
GTTATGAATATAAAAAGAATCTGTCTGGAATTGTCAATTGTGACCTTAAA
TAAAAAAATTTCCTGGTAAATTCCAGCAAAACTTGTTGTCAAAATGTGAG
ACTGTCATCAAAATATTGTTTATCTTTGCAAGGTAACTTTTATTAGATTA
AGATCACAATGAATTATCTTTCAGTTATTCTTAGTTTTGTTTTATTACTG
AAATCGAATTTATATTATAATTTTATGTGCATTTTTCTTATTTTTAAGAT
AATTATTGGATTGGATTTTACTTAATTGTCAATACTTTTAAAAAGTGTTT
TTTGTTCTTATAAAAAAAGATGTTGTGGTCAGCACTCATTATTTTAAACT
AAAAAAGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024155TCONS_00024155Clytia hemisphaericatranscript
TCONS_00024154TCONS_00024154Clytia hemisphaericatranscript
TCONS_00024153TCONS_00024153Clytia hemisphaericatranscript
TCONS_00024152TCONS_00024152Clytia hemisphaericatranscript
TCONS_00024151TCONS_00024151Clytia hemisphaericatranscript
TCONS_00024150TCONS_00024150Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024154-proteinTCONS_00024154-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000476supercontigsc0000476:196026..205734 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TMEM116PREDICTED: transmembrane protein 116 isoform X4 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.16	2.88	1.61	0.7	8.41	7.96	7.17	7.94	7.29	6.71	6.95	6.68	5.51	5.92	5.1	5.22	5.44	5.65	6.71	5.96	7.78	8.31	5.46	7.1	4.48	5.65	5.12	4.91	6.41	6.55