XLOC_013660 (gene) - C. hemisphaerica

Overview
NameXLOC_013660
Unique NameXLOC_013660
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000489:92788..96935+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013660 ID=XLOC_013660|Name=XLOC_013660|organism=Clytia hemisphaerica|type=gene|length=4148bp|location=Sequence derived from alignment at sc0000489:92788..96935+ (Clytia hemisphaerica)
AAAAACCTTTGTACCTGCTTTATTTTGGTTTCTATACttgataaaaatca
taaaatatcttGTTAAAGTCTAAATATCACCTTATTAAATGATTggtttg
gtcagtaaaatacaCAAATACGCCATTTATTTACATCCGGTATCGAAGAC
ACAACGTGACTTCTGCTGTTCAAATGCGTAATCACAGCAAAGCTCTCTTT
ACACATTTAGGCAAACTCATTAAAAAAGATGGTGTTTATCTTTTGTAAAG
TGTTTGTAAGTGCTTGCTTACTTTATCCACTTCACGAAGTACAGTTGTTT
ACTACATGGTGATTGAATATGTTCGAAAATGATATTACAGGCTCGTGGGT
AAGTAACCTTGTTTGTATTATTGCTACATAATAATTAAAGTTTTATCCAT
CCCGTGCCGTCCTATGGGCTGTTTCTTCACCCAAAATTTTTATATCAACT
TGTAGACGAGATAATGACAAATCAGTAATCAAGCACAAATCACTAGGCAA
AATAAATTACATCAATCACCAATCTACGAATCTACTTGGGCAATATCCAA
CAAAAACATAACATTATTCTTTGTTTTGAGTTTGATTTGTTTGAAGTATA
CCAAACCAACAAAGAAAATTTGCCTTTTGAGGCATCTCTGTCTCCAGAGA
AActtacaatagaccttttttcaaagaggccaccctgttgaataattatg
tactgtagtccagcagaaaaacaatgataaaaccatgcataatgtataca
atatacatgatacagtaattatgcatggctctatcattgtttttatggct
ggaatacaaaattattcaacagggcgtcctatttgaaaaaaggtctatac
tttTGATTGAACGCAATCAATAAAAATGCTGAGGTTCTGTGAAGCCTGTT
TTCAGGAATCATAGGAAATTCAACATGATGAGACAGGAGAGGTGGCAAGA
TAAAATTTTGGGAGTCAGGTTCTCCTGAAAGTTTAAGGAACTGGGCACAA
ACTTACATTATTGAGATATGTAGCTAAGTTTCATTATCTTTTTAGCccat
ttgaatttatttttattctagCATCCAGCAGGATTTCATGGGCACTTCAG
AAGTAAATCTCGTAATGATATTGATACACTCTATCGCCACGGTGCCAAAC
CTCAGCCACCACAGTTGTTCTACAAGAGATCTGAGGTTTGAAAGAATTCA
CTTAAATTGGTTATTGCTAGAGCTGAAATGaaacacaatattcaatcaAA
ATTAGGCAAGATCGATTTGATTTATTGTTATACGGGAATACCTTTACAAA
AATATGGGTCAGTTGATATGataataaatttctttaaaaaatcaaggGTC
GGAAAATCAAGATCCAAAAATGTTTGACGTTTTGAATTGAAGCACTAGAC
TTTTCCCCTTTTACTGATTGGCAACTTTACAAGGATATCTCCAAAAAATT
TATGAAGTCCATCCTCCAACTTcgcaaattcaatattattgtCAGTCGGA
TTAAACAATAAATTGATTTAGTCTTGCCTAAGCCACCTGATATCTCTCTC
ACTCACATAATCTAATATATATGAAATCTAATCTCTTCTGAGtgtgacaa
tttaaaaaaaaagaattaagggaaaaaaatgagttttcttgACACTGCCT
CTGCCTAAAGTAATGCAATGATTCAGTGCTCCTGTGCACTCTTTTATTAA
CCAGCATTTTTTTGTCGGGACTTGTAAGCTTTTGTTTATGTCAACCTTGG
TGTTAATTTGATTGTTAATTTGCCAGGAACTCTGCTATTCCATGTTTaga
gtttttcttttgtaagGAAGCAGAACTAAGGTGATTTTATGATTTGATAT
TATGATTTTTATATGTTATAATAAATTATATGTTACATGGATAATAAGTT
TTATCACTTTTGAGCTTCCCTGCTCTCAATCTATTGTAATTTATTCATCC
TTGTTATAGGTGAGGTCAGACAATCATAATTTTTCAAGACATGATAATCG
AAATACACATGCAAGTGGAATGGGTGATTTAGAAATGCATTTTTCAATGG
TATACATCTTTTTtttaaggaacacgtttataaggaacttaaAGCTTAGA
GTAATGGTCCGAAAAAAAGGAACTgatcaggctgagaataagaaaaaaaa
ttaaggaacagtaagaattaaacttgaacttgcacacatttacaaaaagc
taaacaaaaaatttataaaatattgatgaaaCGACATTCAAAAAGGTCTT
TTTCTGCATTGTAAGCAATTGTTCCACATAGCATCAAATCAGCCCAAGAA
TTTttatgagaaaattttcattatctcttacaaattgatcattttccaAA
TTGTATTTTTCCTGTTCAAATTTTGAGTATCTGTAGCGTAGATTTATATT
TCATATTCActtaaaatattgtttttaatattttgtttcaaaatggactg
ttttattaaaaatccatacagggttggacgaaccttttcaagtcaaaata
aaattcttggaaatttgaggataccccctggaaaatggcaaaatttgcaa
agaaaccCTCGGCAAAATTTATTCTTTTACTTCAAAGTGACGGTGGACAA
ACTAAAACTTGTCTTcaacccccctggaaattttagaataacttttcgcc
ccctggaaaatgaaaaaaccacTCTTTTAAACCCCTGGAAATGTTTCTCA
ggttaccctctggaaatgttcgtccccccccccccccccctgcatggaga
taaaatggaatggcccagtTTTTTAGATATtgattttccttcatttttga
TTGTAGGGACTTGGGAAACGTAAACCTGGAGCTAAATCACAACATTATAA
ATCAACCAGCAGTCTCTTGCATTGGCACAATGACAACAACAGCCCTGCAC
CATCACctattcaacaacaaaaaaatcaatggCAAAACCAAACAAGCTAT
TTACAATCTTATAAGACCATTAATAAAGACTCTCAACCTAAGAATGTTGT
TACTCATGAACCTATACACAGTCGACGAAATCCAGCTCTGCGGAGAAAAT
TATTATCAGCTCGAATGTCTGAAAGGAATCCAATCGCTCCTCCATTATTA
GCCTGGGGACCAATAGATGGTAAAAGtactgaaaattttaaaccctGTGT
AGGAGATTCATCACGTCGAATAATTCATAGAACTCCACCGCAGAGGATTG
TTGAAACAAAAACATCTAATGACCGAGTTGTTCGATACCCACGTGTTAAA
TcggctttttgaaaataatttcttatCAGTTCATTTTGTTATGAAGAGGG
AACAAGTTGTCGGCGAATTACATTGAATTATTGACTGTCCTTGCACTTTT
ACGTACGGTACTGTTCAATATTATTCAGGGTGCAGAAAGAAGCTATTCTA
TTTGATAAAGATGAAGATTGGAAAAGAATCCTTTTAAGGGGTTTGAATGG
AGATCTTACAAGATTCTACATGGACCATCATGGGTCATTGGAACTGCTCA
AAACTGCTCATTAGATGAACAAAATCCAGCAGCAATGGATTTAATACATA
TTTGTTATTTGAAAGTCTCATTTGAAAGACTAATGATAAAAGATAGTTGA
ATAATTCAAACCTTCTACTAAATTTCTTGATGTAGGATTCATCGCATTTT
ATAGATTTCTTTGAAGAAGCTATACATGGCACTTTGGCAAGTTTCACTCG
AAGGTTGAACGttagattattttgatttttttatatttcaaaaaattatt
tcatttttggtTTGTGATAATTAACAGTGAAAGCTTTCAGAATTATGTAT
tcttcaaaaattctttttactGTATTCAAGATTTCATTGTTCTAGCCTAG
CTATACTATATTTTATGAATTCAAAATTTAAGTACAAATTCAATCACAAT
TCTAAAATAGTCATCGCTCTATTATTGAATGCTGACCTTTGACCCCGGGG
AGgtgcagctgggcaaaaggaccgacgggtatgtgcgggtcctaagggta
ccttttccaatatgtttagaatgcactgtaagggtcggaaaaactagaga
tgcactgtaagggtagaaatttcagaaaattcttgaaaaatctagatatt
ttgaccaaaaatgctagaattttgaccattttttgcacgaaagggatc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024350TCONS_00024350Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024350-proteinTCONS_00024350-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000489supercontigsc0000489:92788..96935 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.34	28.2	19.59	16.15	106.76	77.49	32.98	34.98	21.05	27.99	20.94	22.22	1.66	1.35	1.04	1.53	0.4	0.94	1.25	0.81	1.5	1.19	6.75	5.24	23.14	21.04	2.52	5.63	2.23	2.64