XLOC_013818 (gene) - C. hemisphaerica

Overview
NameXLOC_013818
Unique NameXLOC_013818
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000504:77059..87369-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013818 ID=XLOC_013818|Name=XLOC_013818|organism=Clytia hemisphaerica|type=gene|length=10311bp|location=Sequence derived from alignment at sc0000504:77059..87369- (Clytia hemisphaerica)
TTAGATTAAAAAATTTAGATAAATTATTGAGCAACAAAATCTTCTCTACC
AGATTTCAAGACTACAAGCTCAAATAGCTGTAAGTATTTTTTTTCATAGC
TACCGCTTTATTTTCAGATGGCTGTATGTTTATTTCAAAATTTAATTTTT
TCTCCAATTTACCTTGAAAATTTAAAGTTACTGGGATACACATTGTTTAT
AAGCAGCCAGGTTGAAAAGGCCTGCTCATGGCCTCAAGCACGAGCTTGTT
TTCTTCCCTCCGTACCTTGATTGTATTTGCCATTTAATAATCCCTATTAG
CCCCAAGCTTTTTTGACTTTTGTATCCCCAGGGGGGGGGGTAGAATCTAC
CACCCTCGATTATTATCGATCTAGAAGAGCTATGGCCATGAAATTTGGTA
CAGATGTTCTCCATCATGATACAATTTTCCAGGAAGAAAAAAAACATCAC
AAAATTTCCACCTGTCGGAAAAAAGCCCAAATATATGGTTTACAAAAATG
TCTATTACAGTCGAACCAATAAAGATATTTCGATTCTGTTTGAAGATTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTATATGTTGA
AATAATAAAAAAAGACTACAGTACCGAATTCTACTTCGAGAATTTCAGTT
CAACCCTTGGTTGTGTTTTGTATAATAAAGTAAATTCTTTAAAAAGCTTG
CATGTTATAACATGTTTTTTCTTATAATTTAGATTAAAAAATTTAGATAA
ATTATTGAGCAACAAAATCTTCTCTACCAGATTTCAAGACTACAAGCTCA
AATAACTGTAAGTATTTTTTTTTCATAGCTACCGCTCTATTTTCAGATGG
CTGTATATTTATTTCAAAATTTAATTTTTTCTCCAATTTACCTTGACAAT
TTAAAGTTCTGGGATACACATTGTTTATAAGTAGCCAGGTTGAAAAGGCC
TGCTCATGGCCTCAAACACGAGCTTGTTCTCTTTCCTCTGTACCTTGATT
GTATTTGCCATTTAACATGGCAAACGAAAACCCTTGACCCAATAAGCATA
AATGGTACTTTTTGAAGAATAGTGTTTTTTGCTGAGGCTGAACCCTGGTA
TTAAAATCAAGGACAATCCTTGGTTATCCTTTGGACAAATCAAGAACAAA
ACAAAGTACACCTTGGGAGCCGAAGTCCCTGGATTTTAGGGATAAATTGG
AATGTACTGGAATCGTACTTGATTAAGAAAACTCTATCCAAAGTTGTCCT
TGATTGTACTTAGCTTTGATTTAGCTCAAGATTGGGCTGCTCCAGATTGT
CCATAGTTTATACCTGTTTTCTCATTACTCTTAAAAATTTAGGGACAGCC
AAGTACACCCTGGTTGTCCATAGTGTACTTAGTTTTGTCCTGGATTTGAA
TACCAGGAAAGTATTCTTAGAAATTTTCCGAATCTAAGGGTTATAGATAT
TCTTAACCTTTCCAGCGGGGTTTGGGAAATTTGCCATAACTCAAGAACTA
GAAATCTTTTGGCAAAAAGTAAACTATCCCTGAAAAGCTAATTAAGTTTT
GCAGCTTTTAGGTTGGGTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTTTTTTATTTGAAAAGTGCTGACTCACACCGTGATCATAACATTAC
ATCATTATATATCAACGGAAAGCTTAGACTCTCTACTTTCTTTTTCTTTC
TTTTTCAACGATCAGAAAGCAAGCCAATTAAAGATATTGCGCGAGGAAGA
CATGCCTATCAAATTGCGTATATGTACGGCATTCGGAACGTCTCAAGGAC
GTATATGTACGGCATTCGGGTTCAAAAGGTTAACATATATATATTTTTCA
TAATAACATTCAATTTTTCCATTTATTAGCCTAAGACGAATCTGTCATCA
CAATTTCTTATGTTTTTTTTTATAAATTAGCGAAAATATTTTACGTATAG
AAAATGCAACAACTCATATCCTGTTAAAAATTATGCTTCTTCAATTCGCA
AAATCTCACCCTTAAAGTGTTCTTANTATAGAAAATGCAACTACTCATAT
CCTGTTAAAAATTATGCTTCTTCAATTCGCAAAATCTCACCCTTAAAGTG
TTCTTAGGATATTCTTAGCATTTAGTAGATTTTCGCCCTGATATTCTTAT
AAGCCACTATTCTTATATCCGAAAAACCTAATTAACCAAAAACATTCAAA
TCAAAAAAGAAATCATATCACCAACTGCAACTCGACGCGACAAGGACATA
AGTGGCAAATCATCATGAAAAGAAAAGCGTGTAAAATCAGGGATGGTCAA
AGCAAATTTTTAAGAAAAAGAACTACTTCAGACGTACGATAGAAAAAGGA
TAGAAAAATGCCAAAAACTTGATATTTATTACGATTTTGAGATTTCCAAT
TTTTTTGAGAATTTTTCGCGTGCATAAACTTTCGCGAATTGCCTTGTTAA
GAATTTTCAAAGACATTTTCTTTCGCGAAAAAGGCTAAAATTGGCGAAAA
TCGCAAAAGTTTCTGCTCGTGAAAGTTTGTATGCTTAAAGTAGAATGTTA
AGCAACCTTAGGCCTGACCCGAACATTGTAGTTGGTTACAAAAAATGTGT
ACGGTATGAACACTTGGCCAGCCAACTCTCTTGACTGGGGTTGGGATTAA
AAGGTCAAACCACAACATGTTAAAAAAAAAGATTTTAGCCTATAGCATGG
AAATTTAAAGGTAAATTTTCTATAAAACTATCCCTCATCTAAATCCTAAT
CATTTCGCCCCTTGAAATATATCTTGAAAAAATCTCTTATTGGGCCAAAT
AACTACGAAAAATATAAGTTTTTGCTTTTTTTGACGTTTCGATGACTTCT
TTTCATCATGATCACAATACTATATGAAAAAAATTTTCCCCAAAGTTGAA
ACTAGCACAAATTGATGATAAATAACAGCTGATCACAGCAATAATTATAG
GTAATTAAATACTTCACAAAGAACAAAAAAAAAAAAAACTAGAAAAGCTC
AAGGGGATATGAGTTTGCCTTAATCCCTAGGGGCCACCTTAAACCGCTAC
ACCCAAGTAATGAATTCTATATCGGGCTTTCTTTGTTCTTTGCACCAGGC
GATTTCAATCCGACCAAATCAAATGCTATCGACGAATTGGAATTGCATCG
CTGAACGCAATCAAATCTCAATCGAACGGTGAAATTCTAGGTAAAATTCG
ATTTATTTATTTATCATTTCGATTGTTTGTCTGGTTTCTAGATTTGATAT
TTGCTGATATAAATCTAGAAATTGAGCGGTCACTCTATGTAGTGTGTAAA
GGAATGGAATATCTCTGAAAAAAAAAAACACCCTAAAGGTAGGCGGTACA
CGATTTTTTTATAAGAATAGTGTACTTTGGATAAGGGTCTAGTATTTTTA
AGAAATGGCCAAAATTGATGGTGAAATATTCTTAACGTATTCTTACTTTT
ATAAAACTTGACTTTTATACAAACACGAGAAATGATCAATTTGAGAGTTT
GAGACTTTTAAGTACACATTNATTGACTTTTATAGAAACACGAGAAATGA
TCAATTTGAGAGTTTGAGACTTTTAAGTACACGTTGAGAGCTAAAAATAT
ATTTCTACGTCAAAGTTTCAAATTTTAAGTCCAACCAAAAACTCAGTTTT
TTCTGCTATCCAGATACAAATGACAACATTCTTATCAAATTCTGTGATAA
ACTCACCCTAGAGGCTATTCTTAGGGTATTCTCACCATTTGGCCGATTTT
TACCCTGATACTCTTATACAAGATACTCTTATCAAAAAAGCGTGTAGTGG
AATAAGTAATAGTTATCGCACGGTACCGAGTGCAATATGGCATATATTTT
TCGAGTTCAGATTTTTCTCTCGTTTACCAGACCTCTTTTTTGAACGCGGT
CTTGTTTTTGTACGGTACAATTTGAAATACAGCATTTATGTACGCGTTTT
GAGCCAATCAGATTGCTCATATTTTTCATGTTGATGATATAAAGGACGTT
TAATTAGGAAAAACGTAAAAGTAGTAAAATCATTGCGCGAAGCACGTGTC
ATTAAAGAGAACAATTAAAATCACGTGTCCAAAACAAGCTTGTAAAACAA
TTGAAATGATCAAAATTAGCCATATTTGTTTTTATTTTTTATTTTGACAT
GTGACATTTGTTTTGATTTTGTATCCCGCTGCATACAGTTTGTTTACAAA
TTTCGTCAGTACTTTTATGTCCCTTTAATTTGGACCAACGTAAATAAAAA
GGACGACAAGGTAGTCACTACTGTTTTTTTTTGATTATAATTTTATACTT
TCANAGGACGACAATGTAGTCACTACTGTTTTTTTCTTGATTATAATTTA
TACTTTCAATACTTTGAATAAATAATACATTAAAGCCATAATGGCAGAAT
AAAAAGTGAGGTCTGAATCACTATGAAAATATGCTGAGCTTGCAAAACCA
TTGTAGTTTTAAAAAGTAAAAACGAAATTTTTAGAACGAATCATCAAAAC
AAAATAGTTGATTGTTCTATTGGACAAGGGAATGTTTTTTTTTAAATTAC
ATTTTCACATCTTTTGTGAAATCTTTTCACATCTTTTGATGCAAGACCAG
TAAACAGCTTCATATTCATGATATTCGTGACGTAATATTTTCTACGGAAA
TACCCCGGTTTTAGCCAGTAGTGGCAAATTTAAACTAGATAAAAGTTGTA
TAAAATTTGCCACTACTGGCAAAAACCGGGGTCTTTCCGTAGAAAACATT
ACGTCATGAATATGTATAAATCGGCTTTTGATTACGTAATGATGTAATAC
CAAAATACTGAACGGTGCAGTTTAAATATATGTCTTTATGTAAGGCAATC
CATGTGTAGTGTGTGCAGCGAGCTTTAAAATAAGGAAGGTATACCCAAAA
ACTGGTCTCTTACAATCTATGTTTCAATTCTAGCCATAATTCCTACAATT
ATTTGAATTCATTGTTTTATGTTTGTAATGCAGTTAGCAGTTACCCTGAT
GGTACTGAATGCTCTATATCCCAAAAAATTCAATCTAACGGTCCATCTTT
CGAGGAAACAACAAAAGTCAGAATATCCAAGGTTAGAAATTCAATCATAA
AATTTCAACGTTTTCAATTCTCTCTTATAAGAAGAAGTGTTTTCTTTAGC
GATCTGTAATCTTGACTATCTTGAAACTTGTACCAATGTAGTCCATTGCC
GTAACCACTAACTCCAGTCGGAAAATATTGCCCATTCATAAAGTCGTGGT
GACAATTTTTGAACCACCATCCACCAGGATATTGGTTGGCGCATTCTCCA
CTACTCGCGTCATTATCTTGATCAATGGAGCTGAACTTCTGTCCTTTCAC
ACGTTTAAACAAATCGAATTCACTGTATCGTGGTAATACTTTCTCATAGT
TGAATACGTATTTTGAAGCAGTTGTACCGATGGTGAAACTAGCGAATCGT
TTGACTTGAGTTTTGCCGGAGAAGGCTTCGACGATGACAAAAAGATCATG
AGATTTTGATGTGGTCAAAAGGTGCATATTTTCAAGGCCTAACCAATATT
CTCCACCGTTAGATACTCCAAAACCAGTCTCATACTGGCTGAAAATCTTA
TCGTGAAATGAAACGGATCCATTGAAACGCCTTTGAAACGCCATCCACCC
TCCGCCCTCAGCCTCCATGAAGCAATACACGTTTTGCTTTCCGTTAGGCA
ACTTAACTTCATACACGCCATTCTTTTTGTACCCATATCGATACCAATCT
TTACACGTTTTCGCTTCAATGACGGTCGAATACAATCGAGCACCAATTTT
CTCGACCAATGAAAATGCAGCAATTTGGCGGTAATAATGATATGTGAAGT
CAAAGAATCGACATTCGAATCCCTGTGTTGCAACTGTTGTTGATGTGGTT
GATGTCACTTCATAAGCGACGCATAATCGGTTATATTTACACAAGCCAAG
ACACTGTTGATCGCTTTTTAACGTCACCTCATAATAAGATTCATTTGAAA
AGGTGTTCCCAGTTTCAACCAAATTGAAGATTTGACCTAAACATCTGACT
GGATGGCGACTAATATAAGTCAATACAATCACGATTAGATAATGAAACAT
TTTGGAGAGGTTTCTCACTTCAAATGGATTTCTTGTACTGAAATTATGGA
GAATGTCAACTAAATTTTATAATGGCAATGATGATACAGTAGACGATGCT
ATCGTCCGTATAATATATTATTATGATATAACATAGTTTGTATATTATAA
AACGTAATATGTTTCGCGGCGGATAGAGTCTGTGTTTACGACAACAGCTA
CTCCCGTAAAAAATTTCCGTCTTCACGTTTGTTCCTTTTAGATGAAACTC
GTCTTAGTCTAATGCTACAGTAGAGTCTCCTTGATTTGAAACATATTTTT
CTTTTCTGAAAATGTTTGCCATCCCCCGACAAGCTTTCTTTTGAACTGGC
AGAGAAAAATTTAAGATTGTTTTATTTTGTCGGAAAACAAAATTTTCACC
TTGACCACTTTTGAATATGTTTCTATTTTTGTTATTTAATCATTGTATTT
TTCATTCACTTTGAGAAATCTGAATGATTCTGGGGTATGAATGCTAAATT
TTACCGCTGTTTTCACGATTCAATAAATTCCTTTTATAAATATTTAAATT
TTATGCGGTTACCTTAAGGGAATAAATAATATCGAATGAAAATTGTTTAA
ATGTTTTGTTTGTATTTCGTTGGAAATCTTTTAGTTCGCTATGTTTCTTG
AAAAGGAAAAATCAGTACAATCAGTTGAAACGATATTTCGCATTAATTAA
TTTCTGCAAAATCCCTAGACTGGAGTCGTTTATAATGTGTAATACTAATA
ATACCAATACTAATAATAATAATACGGGATTTAGTTTGTATAAACGACTG
GAAGAATCCGGTGTTCCAGCCTTATAGATACCCCGGCTAGCTACGCAGAA
ACTTGCGTAGTCAAGGTTAAATTCTAAAGTTTTGGAACAACATCTTATAC
CAGTTGTCAGGGTTTGCTCTTAGGGAAAAATTTTCATAAGGGTGGCCGGC
CAATCTGATCACAGGAGCAGCCAGTGGCGGAATTTTTGAAAATATCCGTT
CTTTTTCCAGGAGAGGGAATATTTAAGTAAAATCCAGGAGCCAGCTATTT
TCCAAGCACTTCAAAAGATTTAGGAAGGAGTATGAAACATCTGTTTCGAA
AATCCAGGAGCAATGAATTAGAAAAAAATTGCACTTGATATTCCAGCAGA
CCTTAAATGTCCCCTGTTGAAAGAATCCAGGACCAAATTTAAAGAGAATA
CAGCATACTGTTTTTCCAGGAGCATCTCGACGCCAAATTAAAGGACATAA
GAACAGATGAATTTTTCCACTAGTCATGATTTAAACTCGGAACAGGTGTA
AATTTCCAGGAACCTAATTTTTTTCAATAACAGATACGTTTATCCAGAAG
TCTGCCAAGAAAAGAACAGATTCATTTTTTCCAGGGAAAGTTACCATTCA
GAACAGATCATTCGTAAATCCTAGCCGTTGGCTGCTCTTATGATCAGAAT
ATAAGATAAACATTCATTGTGTACACCAAGGAACTTCGGACCAAGACATT
CTCTTCGAATTATACACGTTTTTTGTAAGAAAAAACTATATAAGAACACA
AGGCTTCGATGGCAAAAACAAGAACATGTCAAGAACATTTTTAGGCTTAA
AACTCAAAAAGTTAAGGACATCCGAAGGCTTCAAAAACTTTAAATGTTCT
ATTAAAAAAAAAACGTGTATAAATATTTGGATTACAGAGAGTGTTTTATA
GGACTTTAAAAGCTGAGGAAACCAATTAATTCGAATTAGAGAAAGATTCG
AATAACGAGGGTTCGAATTAGAGAGATTTGTACACTCTTTCTTAAACTTA
CATTTATTTATGTTAAAGTTGACCTCTTTAAGGCTGTTTACCAAATTTTT
ACTACTTTGATCTTTAGATTACTTGAAAATCAGCGGAAAATCTGCCATGC
CATCAGCTCTGTTCTTAAATTGTTCTCATGCTATAGGATATTTCACAGTC
TCATTGTTCTAATAAAATTGTTCTCATAGAAATTAAATATAACTTTAGGT
TATCCTCAAAAATGGAGAAAAACTAAATAAATATTCAGTCAAATGTAATG
TAACTTTAGATTATCGTCGAAAATGGAGATGAAATAAATAAATATATATA
TACAGCAAAAAAATAAAGAAAAAATAAATAAAATTCAGTCAACTTCTGTG
TCCTTTTGATACGTGAATTCATGACCAACGTGATCAATCGCTTTCAAAAT
AAAACTGATTTGCTCCGACACGCTTGTTCTTCGTGCATGCGTGAACAGTT
TCCTGTCACTGTGTGTAGCGTCCCTTAACAAAGCACTGTTTGTCTCGCTT
ATCAGTTCATTTGTATTTGTATCATCATGCTTAAGATTAGTTGAGTAAGG
CCAAAAAATAATCAATGTTGATAAGAGACTTGCCATTTTCTCGATATTCA
GATCTGAATTTATGCTCGGATTTTCCATTATTATGTCTTTTCCTTCCACT
TCAAATTCTATTAAATCTAAAACGGTCATCAGCGTGCGTTCTAATGACTC
CAGCGAACCAACCTTCGACGGTAGTTCTTCTTTTAAAAGTTCAGAAACAA
TTTGAAAAGTCTTTGTCATTTTAATTTGTGGGAAGTTAAACTTATTAAAG
GGGTGTGGCCGAGGTTCCGATCCTGTTTTTTCACAAGTAGATGCTTTCTC
TGTTGTTTTGTAACCACTTTTCTCGGCTGAAATCGAAAATCGTAGAATTT
CTTTAAGAGATGCTGATATGACGTCATGTTTCTTGATACTCAAATTGCAA
CTCATATCCTTGTTGGCGGAACTTTCGAGGAAATTTTCCCAAAACGATTT
GAAATGTTTAAGTAAATATAACGAAAACATGATTTTCGGGTCATCTGATA
ATGTTTTGATTTGAACACGTGCTTGTTGCCAGGGTAACCGTATTTTGGTA
GTCGTTGCCGCGCCCTGTCCTGTTTGTTTGAGCATCATGTAGCCACGCCT
CATTCCTATGGGTTAATTAAATGNGCGCCCTGTTCTGTTTGTTTGAGCAT
CATGTAGCCACGCCTCATTCCTATGGGTTAATTAAATGTCATTATTTTTA
CTTTAAATCTAAAACTAAAATTTTTCTTGTTAACCCTTAAAGACAAAAGG
GACGAAATTTTATTCATTTTCATTAGAAAATTTTGTACTTAGTTTCTAAT
GCCCAAGAGGATAGACCATAATGTTTAAACCTATTTAACCTTTCTGAAAG
TCTGTCGTTATTCTGTCTCGTCTTCGCCAAAATCTGGAGAAAATGTCGAC
TAAATGTTGACTTTCAAAGATCGACATGATTTAGTCCTAGTTTAAACGAT
CCACTTTTTGCCCTGCCTATTCAAATTTGAAATTACAGGGGGGCTATAAA
ATTAGCTGTCTAAAGTCAATGTAATGGTTTTTTTCAATCTTTATCAAGCG
AAGATTGTTATTGCTAACTTCGACTTCGACCGGCTAAACTAGAGTAACCA
AGTTCAACTTTCAACAGCAAAGAGCAGAGGCAAGGTAGAAGTTCAGCCGC
CTATCTAGTGTTCATTACATTTGCTATGTTATGAAATTGAAGTGATGAAT
ATTCCTACACGTCTCAAGCGGATTTCATTCTCAGAGAAATATGTTAACAG
GGGTTTCCCGGTTTCCGTCTCAAAATTTTGCATAAATCACCGAATTATAC
GCTAATTTACTATGTAGAATCTATTTTCCTTCTTAGACTAAAAACCTGGA
ATTTGAAATCGTGAGTAATGAAGATAATCATCCATACCTGATTTCACATT
ATTGGGAGCGACAGCTTCTGCTTGTAATGCTCTCCACATGATTGGTAGCT
TGGTCCAAAATGGTGGATATTTGAATCGTGCAGTCTCCAACACCAATACC
ATGTCATGTTCTTCGTTGTAAGCACCGAGTGGGGAGAAATGACCAGTCCC
TGTTTGATTTAATTCGCCACGTGAGAAGTTCAGGATGATGGGATTGTCAA
GTGATGAACATGAACGCTTCACGTCCTCCCTACGGAAAGGAAGAATCAAT
TGATAGGTATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024607TCONS_00024607Clytia hemisphaericatranscript
TCONS_00024606TCONS_00024606Clytia hemisphaericatranscript
TCONS_00024605TCONS_00024605Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000504supercontigsc0000504:77059..87369 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.49	2.41	1.49	1.53	0.45	0.16	0.67	0.38	0.86	0.35	3.64	0.61	7	6.72	1.07	2.41	1.48	2.25	13.91	8.19	5.53	5.76	2.69	3.68	2.52	5.07	1.91	0.63	0.26	0.81