XLOC_013830 (gene) - C. hemisphaerica

Overview
NameXLOC_013830
Unique NameXLOC_013830
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000506:97331..107663+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013830 ID=XLOC_013830|Name=XLOC_013830|organism=Clytia hemisphaerica|type=gene|length=10333bp|location=Sequence derived from alignment at sc0000506:97331..107663+ (Clytia hemisphaerica)
CAATTATAATAGAGATATTCTGTTAATTCACATGATTTTACTATAGTGtt attgaatgttttcaacttgtcaatcaaaaatttgaatcaatcaatcaatc gaaTTTTCAATGTAGATAGGGCTTTATAATTGTAAACACAGTGGATTGCT CCAACTTTTGTTCTATTATCGAAGACACTTCAACTTTGTTCCAGCAAACG AGCAAACAGAGCGTTGATGTCGTATGGTGTAAACAAAAAGCACATGCATT AAATTGAGGTCAAGACGAAACCTGTTTTGACATTTGATACTTATTTATGT CAGTTTATTGATAAATTATATGGTATCAGAATGGCTTCGTATTTCAAACA TTTGATTTTACTATGCATGGTAAGTTTCATTCAACATATTACAGCTGTTT ATGACATAAactttatgttttgttttgttgtttgtcaatttgtttaaaaa gtttAGACATCATCATCAACCATCTCAAATTAAACATTAACTATATAAAG TATAGACTTTAGGAAAAtacttattttgaatttttcagtaAGCTTCATTT TGCTTTTTAATACAGATTACATACGTTTTATCGGAAAATGGAACAGAATA TAAAGACTCCTGTTTCGAGGAAAGAAACAGCATTTACCCTTGTTCATCTA CAGTAagtaaatttttattgttatttctaTGCTAATCATTTGTTACTTTG TTACATATTGCTGTTGTCATTTGTACCTAGagaaaattctttgttttcTG AATCttagttggtctaatgttgacatccctcttctaattctgacaccctt ctttagagataggaatataataataggaaggtcagttagtcacactagtg tcccgccaaaatgcgtatcaaagatttatgctgcgaaagcgctttatctt ttacttgactctcaagccaaaaaatgcaccgcaaaacttctaaagggaat gtaatgaaattaacattttcaaaaactttgagaaattgcctaaaatttga gccatagatgaaataatttgagccaagccaaccttgaaaactaatttgaa gatcaacttcacaagaaaaagatctacgggggaggcggaatccacctaga tctgcgcaccgccggataggctatttcccggaaattttgccggacctcaa acaatgacccatttacatgtgcggaattatttttactttagcctatagac aaggccttaaaaaatcgaagcgctgtctcgggaattgaatgacaaaattg ggttggttgatatttggctgctgcacgttttattttgtttcaaactttca agttttaattaattgtcttgcgaacttgattcaggtaactctcatccttg ttgtgcaaatgcatcctgtagatgactgatgttgttttttctgaaagcta gatttcctagtgtgactaactgaaggTTAGGATCACttatagacaaaaga ttttttcagatcATACTTTGCTAAGTAAAGAAAGAGAAGGTTTTATTCCC ATAATACAGAGCATATAATTTCCCGCCCAAACTAGTGGAGTAATTAATAT GCAGAACTGAGTTGATAGGTCGTCGTGTTCTCCTAAACGACTATAGACCA TCCCattctcccaaacaactattCTTCTCAGCAATCTCCCTTGATTACGA TCGAGAGCTCTtctaatttggaaattaaatgCATAACAGGTATTGTAATC TTTCCaaagaagaggaagaagatATTTCTGGTTGCAAAGATTATTAAAAT TCTTCATAATATAATGGTAATCCTGTTTAGTAGACAATGTCATTCTTCTA CGTTTCCTacagtatgaatttcttttcttaatacctaaagtaagaaattt tggcggtGATTTGATTTGTCGaatggtcaaaaaatatttttagaggAATT TTAATTTGGGGGATGGCTTTAAGATTTAAACTTGGCAGGAATTTGATTTG ACTGATGAAGAATAGATTTAGCCCAAAAACgccattaaataaaaaaaaac ttttgaggcctgaaataaagcaaaacacAAATATTTTCAGGATTTAATTA ATTAGGGCCTCACTGATCCATAAAGACCAGAAGTCAAGTTAATCACTCAT GAATCCCAAGTTGGTTGGTTTTACTATCATTGTTTAGATCTTATGGATGC TACAGATCAAGGGTAGTTTGAGTTTCCTACCTGGTAGTTGACAGGATATT TATTTGGGAGTTTTAGCAATTTCATAATAGAGGTATCGTATTCTTCATAG ATCACTGGGAATGTCATTTTAATGCTGTTTTATGGAGCCATCCTTGGAGG TGCAGCAAAACTCATCTCAGGTaagctgaaataaaaaaatttgaaatgaa aagcaATTTGAAAAGTAATAAATGATTCTGAGTTAAAGTCATGAAGTATT CTGAAAACtagttttatttctttttttttattttcagatggCGCTGAGAT GCTTTTGGATCTTGGATTCTCACCCAGTATTATAGGTTTGAAATTCACCT TCTTACGTTTATGATTATAAATCATATTTTCAATCTGTAGCactaacttt tttgagttaACATTTTATCCTGAATATGTTTTTAACAGAAATTTTAatgt ctttcattttttcatttgctATTTAGGTGGTGTTGTTTTGCCAATCCTTG GAGCAGTTCCGGATTGTGCTATTATTGTTTCATCTGGTATGGGAGATGAT GCACAAAATAAGTTATCTATTGGGATGGGGTATGTTTAATAATCATTATT TTAAATTCTCAATAAGCTAATCCTAAAATTGTTCCAATCATGTTTGTATG TTCTTCAATTCCATTttttagtgttttcatctttAATAAATTAGCTGATG TTATCTTttaatttgtattttgtttttcagaACCTTAGCAGGGAGTACTG TGATGCTATTGACAATTGCTTGGTCCTCCAGTTTGATTGTCTCAAGATGC TCCCTGAATAAACATGGGGAATCTATTGATGGAAAGGGCAAAGGTTTTAA CCTTACAAAAATGgtttgtaatttttatttattcttcaCAGGAGAAAAAG AATTTGTAAGGAAAACCCATTCGCAAAACTTTGTGAAGTAATTGTTATTT TATTGAGTTTTTAACTTTGAGACTCTATGAGAAAACCTTTCATGAAATAA AAGACATTGATAACAGGTGCAAAACAGTAGGCTTcactcttaaaagttat ttaaaaaaagaaatgataACATTCTATTTTAAGAAAGGATGTACTTCTCT TTCTTCCCCTTATTTTTAAATTAGATGGATATCATCATAATTAAACTAAT GTTCCAAAAAGCCTGTTTAGAAGCTTCCTTTAGTAAAGTTTTAGGCCCTA TCCACCATAATGTAGATTCACATGTAAATTCATTACTTTGACAAAGTATT ATGGAAGCTAAACTTCTTATTTTCCCTGCTAATTAtctttttcttacatt tttgaCTTCAGGGAATGACTCCTCTCCCAGAAGTTCGATCGGGAATTGTG ATCATGTTGCTGACCTCACTATTCTATTTGTACGTTCCAATGTTTCTTTA AACGTTTGCATTTTGATATCACACTTTGAATATTCACACCTCAGTATGTT ATAAAAGCTTCAAAATATGGTGTAGACATGGAGTTGATAATATCACATTA CTCAAAAGATAAACTTCACCATCAAGTTTATTtaagaaatttaaagaaaa aaggggCCTAGAAATCAACTTGTAAACTTCCTTTATGATAAAACTTCATT CAAATTGAAACAAGACACGAAATATATTCTTTCCCCCTCAGTGTTGTGCA ATCAGCAGATTGGAAATTTGGAGCCAGAAATACTGGTGAACAGCCAAAAT ATGTGCGAGATGCAGCACTTGCAACTTTTGTTCTTTGCTTGTGTGGACTT GCTGGATACACAATTTATTCGGTAACAGCAGAGAATTAAATATTTGCATA AAACTCAATCATTTAAATTCCTACAAATTGTCATAATAAAGGCTCTTTTG AATCTAATCAAACTAATGCCAGTAGATACCCCTTGAAATCTGCATAAAAT CGATTAATTCGAGAAAAGTTTAAGggtaaaacttttttattggAAGTCTT TGATTATCTTCTAGTAGTGATGAATTGTAGAAATCaatttgcacttttta cgaGTGAAACAAGAGTCTTCTTTTCAATGAGATAGTAATGAAAGggtttt tgattgaaatttggaAAGAATATCAAAGTCCGGTGACAATGAAaactcaa aagaaaaattttagggATGTTATTTTAAGCAGGTATCAACTGGTATCCTT ATAAATTTGTTTCCAGTATTTTATTGAATATAACTGAAGTAAATTTAATT GTATGGATTCAAGTCATTTGATCTTCTTTCTAGGTTTTCGACAGCAAACG TAATGAAAGACGAGCTCGTCTTCACAAGGAAGAAATGTAAGCCAagaagt tttcttttgattgaaattcgagaATGATCTGACGATTGACATCGTGCCCT TAGAAAGTTTCTTATTTCATGAGGTATATTGATACCGTGACGCCGTCTTA AGAtaacaattttcatttcattttcatttcaagtCATACCAATGAAATCA ATAAAAAGCTATTCCTgtacacttttttgaaaatttgaataccTTAAAGC CTTCCTTTAGAAGTCGTATatatatgttcttatacaaaatgGTGACTTCA CTTTCCACTCTAAAGaacttaaaaaaatcatttgttttcaatatttattc gtTTCAAAGTTCATTTACTGGTAATCTTCACTTGAAGATGACTAAAGCCA TTCCGAAATAATGTTGATATTACAGTTCTGTAAAATAAGAAATATCTTTA TCTCTCAATCTTAAGGATACACCCCTATAATTTTAACTTATTTGATTTTC CCATAGTTATATCAATTTATTGTGAGaaacttaaccctttaagtgccaat gtcgtatatatcagacatgggctatgtaggagggcgaagccctcctgtaa tgcccagtatgagttagaaatcgtcatttttagtctaactcgtaggaatc gAATGGGGCTTCATGGCcaagcaaataaaaaaatcaaaattgagtctttt cagcgagattttatactaaaaagtcaaaaaaatgcaaaaatttgacaaaa gatttttaccgttttttgaccatttttggtcaacgagtgatccaagaacc tccaaatttggccctgattaacttgattctgtcctccagcaaattagttt gaagttttaccactcggAACCTTTCtaccgctgcgcggacctgactgctt taatttccCTTACTTACCCCCCCCCTTAGCCGCCGCCCAccccgcccttc ctaaatcgggcgacGCCGAAGGCGCCtcaaagaaagaggagactctaagc tatccaacggactataacgagcttctaactccttctagatccggagatat aagcctttaaagttgaattagcgattttctttaaaaaacttagaaaaaaa tgaccgtggcacttaaagggttaaccaACCCTATTTTTTCCATTGTAGGG CACAGCGTCATGTTTTGCATGCTCTCATCGTGATGGCCAACAAACAAACG TTTAAATCACCCAAAGCTTCACGAGCAACAACTGATGTGGAAGATGGAGA CCCTGATGCCAGTAAAGGTGATTATACCTTATCGTCAGACTTCTATCAAA TCCCACCAGAATCTGTTTTTTTTATAGCTTTGTACTGGCATTTTTCTTGT GCATTAACtggacaaaaattaaaaagattttggtGAGGTACTCGATAGTT GTTTAACTAAAAAGCAAGGCTAATTATCTTTGTACGATTAGGGTGAAATT CGTTAAAAGAATCTGCTTCAATCTTTTTAAATGTTGGGACAAGACTTATA ATGAACATCCCTGTTTTCACTTGCAGAGGAAGAGAACGAAGCGATCTCGA AGAAATATTTCAAAGCCTGGCACATGAAGAAAGGAGTCCGAAAACATCAA GAAGAAAGCGATGCTTTGTTGTCCGATGAACGATCCTCTGCAGCCAGCAG TGATGATGTAAGTTTACTTTTGCAAAGTTTGGTCAGTATTCGCGTTTAAC TTGTGAAACCGAAAATTGTTGCATTTATAGGGCACATATTTTAATTTCAT ATGTTATCATTTGACCAAGGtgctttgtaaaaaaataactttcgaTATTG TTTTACAAGATCCCAATATTTCAATATCTTCACGAACTTCTTCCCTTTAG GAAGGCACTCCCGAAAGTGATCCAGAGAAAGAAGATAGTAAATTGGTGAT GTCAGCAAAATGCGTTGTTATGCTCCTGTCTGGAGTTGCTTTGGTGAGTT TTCTcatctttgaataaaaatacTCGAAGGACTGCCGATTATGGAAACCA CCGAAAAAATTTTTGCGACAAAACCCCTGTGCCGTTAGAAGCGGATTTTC GCAAGGATTAACATACTCAAAGTCTCACGATGAGGCccttggggaaaact tttggtgaGATCAAACCTAAAGGGTGCGTTTTTGCCCTAAAGCAGGACAT TTTTGAAATAAACTGAAATTCCAAAGAATTTTTTGGCGACGGAATTTTAT ACTCGTTTAGACGATTTGACGGAATTCGAGGAAAAAATTGACGTAATGGC GgaaataggtaccccctaaaaCCCGCCCCTTTGTAAGGCGTTTTGGGGCA AATAAGTAGCGTTCGGGTTTTTTTCACGAAAATCGCGAGGCTCTAAGTAT GATAATCCTTGTAAAACTCCACTTCTAACGGTACCTACCAAGTTAGTgcg gaatttttttctctaattctCTAATTCTGTCAGACTATTTTGTCTTGTCT ATtggcaaagtgaattttgagaaaaattggcATCTGCCTGAATAAAAATA TTCTGAATTAAAGTATTCTTCACacgaacaaaattgaaaaattaatctCA AATATGTAATGGTAATGCTGATTCATTTTGGTTTTGATAGAGTTTTTGAT ACAAACTTTCAGGTGACGGTCTTCTCTGATCCAATGTGTGACGTTTTGGC TGCAATGACGAACACAAATAATATGTCTTATATCCCGATCAGCTGTAAGT GCAACTATATTGCTGATACTTCTGTCTGTTAAATTTTAATGGAGTAAGTC TAATCTAATGCTTTTCAGTATATACTTTCACTGTAATCCTTCATGGCCCC TGTCACCGGGGGGACCAGTGGGGCattagcctagttaactaagcccgtat tcacaaggctaagacacacggcttatggcaatatagcgtttttcggcgct ttaaagagtttttatatttacgcattttaagtttgccttggaatacttag ttattcagtcacaacttttaaccatcagatttatccaagtgactgaatca aactagcttagatttctaggctagggggccatggccccctcAATATTtcg caaattaatttttttttactttaaaaaatcttatatataccgtttaaagg ggtgaaataagggtaaaaagaagaaaattttcttcgtcgcccaaccatgg tgggcgaaatattttttggccccctcaattcgattcgcacgccgggggcc atgtCCTTAAGTAATTCACTTTTTAAAAGGTCCCTATTGTCGGTTGTGTA CAAAGCCTTGACTTTGGCTTTAattgctttttggacctaccccggtgggg tggaggtcctataaattaacccatgttcgttagttagtgtgttagttacc agcttttctcgagattggctcattagttNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNaccataaaccctcgaatgtgacgg agcccgattttcgaaaaaaaaaatttgggggcaaatttgggccaaaaaac agcttaaaaacgggttgtttggactttgtgaaaaattggatcattaattt tttcggatttttagcatgaaagtagggtacaatcatagttaaaggatggc tgaagtagatttttgaaaaaaaaaatttttggctcaaaaatcgcattttt atctataagaaccacttttaataagaatacatcaatgttcttagccatat tattattattatttttattagNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNtctgtaaacacttattatttttttggctgaaaaacgaa tctttatctataagaatcactatttatgagcatagatcaatgttattagc caaattgttattttattattattttttctaacagaagaaaatgtcacggt agagtgcgacggcttgagttttctggaaaccttatttattaagctgtgca tttttctgacagtggtttttataaagaaaagcgcttaatagcttttttat ttctttttcaaaaatcttttttaatagTGTTGttagtttctctcaataga tatgctttcattttctttatttttttgtattttgaccaattATGTCTTAT gcgtttcattgtttcaatgttcactgattagtttgataactaggtaggtc cataaaagtatcgcttgtttttcactgtttttggctgtaattgcttcttt ttttcactgtttttgttTTCAGCATTTTACATTTCGTTTGTCATCACTCC GTTCTGTTCGAATGCATCTGAATTCGTCTCTTCTTTGATTTTCGCAAGCA AGAAGACTAGAGAGAATGCAACGATGACGTTTTCACAGGTATTGTTAAAC ATATAAGTAGATTTTATAGTAGATTAACGAGGATATCACTAATTTCACAA AGAATGATAGATATTTCAGATTATTTGAATTACTTAAATGGATACCTAAC CCGATGCTCTTTTTGATTGAGTCAACAACTTCAAGGTCAAGATACGCAAC TAATTTACTGTGATGTTCTCTTCAGCTTTTCGGTGCAGCTACAATGAACA ATACAATGTGTTTGGCCGTCTTCATGGCATTAGTGTATTTCAAAGATCTG AAGTGGTATTACGGAGCTGAAGTAATGTGCATTGTTATCGTACAGTGGAT TGTGGGATTTATTAGTTTGGCGCGAACCTACAAGGTAAGGTTCTTTAACG TGACTATCTACAGTTCCTGTAATATCTTTAATTCAAAGGCTCATAGGATA CGCAAATTTGTTGGAGTTAGTTTAATATTCGTACAGTAATATAGGTGTTA TATGAATATACGATAATTGTATGTATGGAgagattcgagttatggaaatt cAGTCTGGctttatcaattttattgtTGTAAGCccctttttcatttattt tcaggTTTGGATGGCAATCCCGGTCGCCGTAACTTATGTCTTTTGCATCG TGTTGACGTGGTTGTTGGAGAATCAACTCCACTGGAAATAAAAGAATGGT GGTCTAATTAAAACTTTAGTGGGTGGACTATATAGTAAAGTAAAGGATAG GTAAAGGTTTAGAAATAGAGTGCTTTTGGACAAAAATCAAGCCAAATGAT ATAACTGACCTATATGTTGTTTGAAGATATAATCAAATAGATGTGGAATA GTAATCAAACAGATGGCCGAAGTTAAGTTTTGCAAATTAGCTCAATTCAA TCAAGACCTCTTCAAAAAAGTCCATAGTAGCAAATTTCATCCTTGAAACT ATACTGTAGTTCATCGGCTGATTAACTTTTCGAAGTAAAGAAAccgtttg aattttttttgagtttgatAGCTGTAAATTGTCACCACAGGTCAAACAAA ACGAATCTGAATATTTTGATCGTGATGTAGAGAGTCAATATGTAGTAGTG TGTTTGTAAAGTAGAATTTTATCAAAGATTGTAAAGGGGGTTGATTTTCT AtctaatatttatatttattaacTGTATGTATTTGCAATCAAATAAATCG GGTTTAATTTTGGTAATTTAGTAGGGATGGAATTATGGAACTATTTTTTA CACACGCTGTATCTTTTAAAACCGTTTTGTTTACtgtaaaatgcaatatt tttgtttgttttgtactAGAAATTTCCATTCTCCTCGTTTTCAAgtcata ttttaaaattttcctgaACATCGTTAAGCAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024624TCONS_00024624Clytia hemisphaericatranscript
TCONS_00024625TCONS_00024625Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024625-proteinTCONS_00024625-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000506supercontigsc0000506:97331..107663 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
124.42 123.42 60.72 50.85 67.82 46.07 59.99 62.99 69.56 76.48 59.45 60.87 43.1 40.45 18.19 19.13 32.16 31.36 56.88 71.78 41.91 39.45 42.07 47.69 34.98 32.82 12.89 9.37 16.29 18.93