XLOC_013844 (gene) - C. hemisphaerica

Overview
NameXLOC_013844
Unique NameXLOC_013844
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000506:173375..183533-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013844 ID=XLOC_013844|Name=XLOC_013844|organism=Clytia hemisphaerica|type=gene|length=10159bp|location=Sequence derived from alignment at sc0000506:173375..183533- (Clytia hemisphaerica)
CTCTACTGTTAGCGCTTAGTTCATCAATTCTTATTGGATTGCCATTTTCC
CTTCCCTTGATTGAGGTTCCTTATTTGAAGAATTGTTTAGACGATAGTCA
AATAAGTTAATAACCTGTCGCTTCTGCTATGACATCCCACACATACCAAG
TTGGTGCCCAAAGACAGACTGTGAACAATCCGCAAAAGAATTCCCAAAAT
GTTTTCCAATGAAGCTTCGTAGCCATCTCTTTGAATCGAAACAAAACCAA
ATGGTTCATAGAATGACAAAAAATAGCAATCAAAACGAGTCCTGGAATAT
CACTTGCGGTTTTAGTGAAAATGGATTCTGTTGCGAAATCGAACAATTTC
CATGTTGTACTCCAGAACATTCCACCGAAGATATGAAGGAATACTTGTCG
ATGGTGGATAGTGTATATGTACGTCAAAATACTGATGAACAAGCATACCT
TGCAGTGGTTGTAACGAAATTCAGTACCCGTTGTTGCATTCAAATCAAGT
GAGTCCACTGAGTCTTTATCATCGAGCTCTTCAAAGTGCACACGTCTTCG
GAAACTTGCTCGTCGCACGTGTTGCATGAAGCTTTCAGATGATGTTGACA
TCTCTTCAGTAGACGAGCCTCCAATCACGTCCAATGAAATATCACAGGCT
GCTTCTGCAACGTCAGCATTTTCTTCTTTATTGTTGTCCTGTATATCCTT
AAGATCTATGAAAAGGGTATTTGATTGTTCACTCAGTTTGTGCATCGGGA
TTTCATCTTCAACTTCAGTGTTAAGGAAATTCTTATTGTCGATGCCGATC
ATCGTTTGGTCTGGGAACGAGTTTCCGGCCTCGTTTTCGTGCTGCTCTTC
TTCAATGATTTCAAACGAGGGGGCGTTCAAGAATGACATAGTGCTGATTT
TTCTTTTATTCTTCTCGTTGAAGTCTAACTCAACACGTGACATTTTTCGC
CCTTCTGTTGACTCGGTTGATTGTAAACTAGAGGTTGACGTTTTACAAGA
TGGTGGTGTACTGTCCTGATATACGGTTGACGCAACTGAGCTCATGTCCG
AGTTCTTTGATGACTGTGAGGCTTTTCGTTGTGAATACAGGCTGTTGGTG
CTGCTCGAACGATGAAGTTGTCCGGAAATCTTACGTGCTGCGTATTGTGG
AAGATCAAAACCAGAATTTAAAGGAGAAAATTTCCTTCTACTCTTCGTGG
GTGGTGGTGGTGGAGGAGGAGGAACTGATGTTTGGGCTTCCTTAATCTCC
ATTTTGCTATTTCGAGTGTTGCTAGTTTTTTGATCGTCTTTCAACAACAA
ATTTTCAAAAACATGGAGACTGAACAAGCCATCCATTTCCTCCAGTTCGT
CATACTTATAAATCTTGTGTGTTGGACACAAGTTGACTGCATTGTTTCTT
TGTGTGAAGGCCAGGGTTATTCCTACAATCAGTTGAAAGATGACAGAGCT
CAAGATCTTGTTGATATCGAAATGAAGGTGTAGCAAATCGACAACGTAGT
CGAAAGTGGCGAACAATCCACGCCACACTTGAATGAACCCCACAACCACC
ATCCATATCATTAACGTCAACACCTTCTTCAAAACTTGAAACCGAATCGG
TTTATTTCGGATGACCTCTTCTTCTGTTACAATGCATGCTGGATGTAAAT
GTTTCTCACGTGTTTCATAAAACTTATGACAAGTCTCGCGAAACAGTAAT
CGTTGGAGCAGGTAGTAGAGGTTGGCAGCTATGATCAACATGTAACCACG
GACATACGATAGAGCACCGTCTGTAGTGATGTCCATAGGCCATAGATGAT
CTGCAATGTTCCATACTGTCCACCAGAAACAGATGTCCGCACATCCGATG
TAAATATATTTGAACCAAATCCATGAACGGTAATCTGAAAAAGGTTGACA
AAAACTTATTATTGAATTCATATGGATACAGGAATTTTTACACTCGATCA
AACTCTCTTCATTATTAAACCACATTGTTAAGTCGAAAAGTATGAAATCA
AATCAAATGGGGTGCAATTTTTGACTGAGGACCTAGCCAATGTTTGCTAG
CACAATTTACTTCTTCGATAGGTTTCCTTACGCTTTGGCTACATATCTTT
TATTCAGGGAGAAAAGGGTGTTGAATTAGCTAATATTCTTGTACTTAATT
AGATGTAAATTGACAGAGAACCCACCCATTTTTATCTTCGAAATTACCAT
GGTCTAGTGGCATGTCTCAAGAACGCATCCTACAGTATCTCTCCTGATTA
ATTAAAATCCATAAAATTGATGTGGAGATGTCATTAAGCAGAAACTGTGT
AACGGCTTTATAAAGAAGGCTAGATGGGCAGTCTTCCTACTGAGGCTAAA
GACGATTTTCATCTTAATCTTTTTAAATCTGAGAAAATCTCTCCAAAAAG
CATCCCCGCCTTTTCTTGATGACTTCTTGGCATGAAAACAGCCTTTTTTC
TTGCGTTCTTTCGTCAAACTCATGTTTTGAGGTACATTAACATTTCAAAG
TATGAATGAACCTCTCATTTGAAAGACTATCAGACCCTATTTTTGACATC
TGAATGAAAATTGAACGTCATTTGATGGTCTTATGACATGAGGGTGAAAG
AAAGATGTTAGTTTAAAGAGAAATAAACCCCTTTGAGCGTTTTCGTCGGA
CCGATGATAATTAAGTGATTACCGGGGAACCATCTTGTAACTAAACACCC
CATTAAACACGCATGTGTGATAGTTTAGAATTTGTATTCTCATTCAGTAT
ACCTCATAAAAACAACGGTACAACTAGAAGTTGAAGTCCGGTAGTAAGAT
ATTAGACATCCAACCAATTATCATTTATTTCCTGTGATTCCATTACGGTA
GTATTAATTAATTGAATGTATAAATACTTTAATTTTCATTAAGTATCTCA
TTAAAGGCACCATGCATTAGATGAATGCCTCAAAACACTTCCTTATTCTC
GCTGCAAGCTATCCTTCCGATATTCGAATCACTCTATGACTCTCATCTCC
CCGATAAATGGGGCTGAAACAATATTTGAAATGTGACCCGTGTTCATCAA
ATATCGAAAGGTCGAAAAATTGAAAACATCACTGACTGACAAATTTTGTT
TTTGCCGGTTCTTATAAAGTCACTGATCGGTGCAAAAGTACTCCACTTAA
AATATCAAAATGTCAGCACCATTATAAGATATTTAAGAATCGATATTTAC
TAAGCCGATTTCGTGAGATGGAAGCATTACACACAGTCATTTATCAAAGT
ATAATCGCTGTAAAGAGAGTATACCCCCTATCTGAAATCAAGTTATCGAA
CGGTTTTATCATTTGATTTTTTGCTGAGAGGTGGTCAGATGGGACGCCTC
TTTTCAATTTCCATCATAGATATGTTCACCATCAGAAAAATGTTCACCAT
CAGAAAAATGTTCACCGTCAGAAAAAGGGAAATTCACATTCCTACCTGTA
GAAATTTTGATGTCAACATCGTTCTTTTTGGTCCCATGCATCTTGAGTTA
CCAGCTTCCAAAATACCGAATTTAATTTGAGATATTTTAAATTTTTGTTT
TGATTTTTGATGCATTATACTATCTCATCTTGTTGAGAGACAAAAGATGA
CGTCACTTTTTATTCCTCTTCCCGGGCAACTATTTTATATAAATTTTATT
TTTATAAAAAGATGACAGGGGCTGGACACACTCACTAGATAAAAAAGATT
TCGTCAAAAAGAGGGAAATGTTCAAAACTTTAGGAGTGTTCGGTTCCGTA
TAAAAACCGTTTTTACATATCATTATAAGATAAAAGTCAGTGTTTTAACA
CCAATGACAATGTATAAGTGCCGTTAGTATCAAGAAATTGAATGAAAAGC
TAGAGTTAGTTATATGAATCTGATTTTTGAACAAAAGTTTGGGACAAAAA
GGGAAAAACTTCAAAGGGATAAAAAATGACGTTTGAAAAAGCGATGTGAA
TTATTGTATGAGGACCACATGGTGAGATTTGAATCGAACCGACCCACAAT
CCCAAACCAATCGCTTCTCCATGTATTAAAGTTTTTTTCATTTCGCACAT
TTCGCATACTCACAAACTTTGAAGTAAAAACCATCTGATAACAACAAAAA
GTTTCTGAAGCTTGCAATCTGTTCTTTCCTATATTTGGCGTATCAAGCAG
CTTATCAACCTCGTTCCCTGCGTATTATCAGCTTTTTGGGCATTCTCTGT
CATCAATTAGTAACGTAAATAAAGCCTGGGATACCGTAATTTCTCTAATT
TAATACGACCAAAAAAATAATTATTTTGGAGGTGTCGCACTAATAATAGG
AGGATATAAATTGCTCTGAATCTGGAATCTTTTTATCGTACTAATAATTA
GAGGAAAAACTTTGTAAAGGCGCGCTAAATTGGAGGAAAAATAAAAAAGA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGTACTATA
ATTAGAGGAAAATTTGAACTTTACCGTATTAAATTAGAGGAAAATCAAAA
GTAGGTAAATGGGTGCTCGCACTAATAATTAGCGGATTTAAATTAGTTCA
AAATGACGAAAATAATTTCCTCGCATTAATTAGAGGACGTATTAAATTAG
AGAAATTACGGTACACGGGAACGAGATTGGCAGCTTATTTATCGCTGTAC
CTGGCGTTCTAAATTTATCTCGCTTTAAGGGTGAGATTATATTGGTCCAT
ATTTCTAAAGTTCTTTACAGAAGGAAATCCCAAATTTACAATTACACCCC
TCTCTCAGTGCCCCGGTAGAACTTTTTCCCTCAGTGGGGATGAAAATTTC
TATCAAAATGCCAATGGGGATAGAAAATCTATTGTTTCCAGCTCGAAAAT
TCCAGTGGGGATGGTTTTTGAGTGCAATTTTTCACATTCAGTTTTCAATG
GGGATAAAATCATAGAGCAATTTCGCAGTGGGGTTGAAATTGTAGGATGT
TTTTTCCACCGGGGACGATTTTTTGGCCTATTTTTCCACCGGGAAAGAAA
CCGGGTCTGTGACACGGGTGTACAATTTCTTTCACTTATTACAAATAAAG
GGCGCCAGTGTAGAAGTAGACTTAGCATTTTTGTACAATTGGCACTTTGT
GGTTGCCTAATTTCTTTCAAATCATACCAACCAAGTAACATTAAATATCC
TTTTAGCGCTAATTCAACAGTTTTTTCAAATGATTATATTATTTTCACAA
ACTAATATAAAAAGAAACATCACAAAGCAGTATTTATAGACAAACCAAGC
AATGCTAACGGCAGGAATGCCAACACGTTCAAAGACCAACAAACTTCTTC
CATATAACTTGCACCTATAAAAGAATAAATCAGAAATTCAAAGAAGTCCA
TTTTTTTCTTTACAATTACAATCTGAGAAACTACATTACACTTGTTCTTA
GGTTCCAAATAAACGGATGGGGGTTCGAACTAAAATAAGAAAGTAAGATA
AGGCACCACTAAACCTCTCAGAGTCAAGAACAAATTCAATGGAAAGATTA
ATTATTGAGTTGTTTATGTTGAAAGGTTGTCTAGTAGTAGGGGGAAATTT
GTTAAATCGCTCGATTTTTTTAGTCAAAGCACTTGTTATACATTTTTTGA
AAGCTAAGGGGTAGGGGAATCAAAATAACTTGGTTGCCAATTTTTTTTCG
GACACTTTGGTGTGATTTTCGGACAAATACGACGGACGGTCTCAGGCAAA
AATCATAGGGTGAGAAATCAATGAAAATTTTAGCTTGAGAAAACGGAGAC
CTGTTGTGTATTTTTGGAAAGCTCTCAAAAAATTAAGATTAGAGATATAT
TGCAAATATAGGTGATTTCTGTACCTCGAGATATTAACCCTTAAAAACAG
TGTTTTTCAGACAGAAACAGCTGTTTTGTCCAGTTTTTGCGCTTTTGGAA
GCTCAATATAGGTTCTGAAGTTTGTTGAACAAAAGATGTCTTGCCTGAGA
GTAAATAGAGCAGTGCAAAAGAAAGTGTCGAGTGTTTTCGATGGAATTTG
TCCTACACGCACAAAAGGATCTAAGGTGTCACGAAAACCGTGTCTAAATT
TATGTTCATTGAGGTGACTAAATCCTTCTCGAATACGATCGAGATGGACC
ACACCCTGGTTGTCACAAGCTCCAAAAACAGGAAAGGTTTAGCCCTTAGA
AACTTGAAGATTGCTTTTTTGAAGGTAGATACTGAAGGAAGATCTCTTAT
ACTACCATCCAGAGTATTCCACTGTGATACACGTTTTTTTTTCTTTAGAA
ACACACTTTTAAGAAACATGAGGCTCAGAATGCCTAAAAACTAAGAAACA
TCTAAGAAACATGCTGAGGCTGAGAATGAGAAAATAACATTTTTTATTCG
TTTTTTTTTTAATAACCTTCCAATCCAGCCTTCCATGAGGCTGATTATGT
CAAAAAGTTTAGAAACATGTAAGAAACATTTAAGGCTCAAAAGGCCGATT
TCTTAAGAAACATTGAGGCTGCTTGGTAAAACTAGTTTCTTAAAAAAAAA
ACGTGTATGCAGTAAGGATAAAAAGAATCTCGGAAGCGCTCAGTTCGAAT
ATTAAGTGGATAAATAGGATTTCTTGTTCTTAGATTATCTAGTGCCGCAA
GTCTTGCTAGTAAGTAGTTACGTAAATAAGAAGGGGCTAAATTTTCAAAA
TTAAAAAACGATCAGCAAGACTCTCGAGACCAAGTTCAGAATAAAGATTT
TCTTAAAGACGCTCCACGAAAGCAGCCTGTTATAGCACAGCCGGTATTAT
ATTGGATGGATTCAAGCTTACGCTCAAAATTCGAATTTCCGGGATGGTCG
TATATGATATCCCCATAGTCTTAGTGTTGTCTAATGTAAGATTTATATAA
GGTAAGCAGAGATTTTCTTGGTATATGTTTGCGAAGTCCTTTTTTATTTT
CCGTCTGAATGGTGGCTGAACGAGAGTTCGGAGTCCAAAGGAAGACCTAG
ATGTTTCTGACATTCACCAGTTCTTATGTCAGCATTATTGAAAGATAAAA
CAGGAGCATTAGCAGGTAAGAGCCTTTTGGAAAAGTAAACTTCCACAGCT
TGTTTTGTAGGATCAGGATTAAAAGACATCTTCCATTGACGAGCCCACTC
ACTTGTAAGATCTCTGTTTAGTTCCTCACTGCTCAAAAGTTGTTCAATCA
CTAACGAAAATAAAGATGTGTCATCAGCGAAGATCTTAGGCTTGTTCTCG
AGATTGTTGGAAAGGTCGTTGATGTAGATTAGAAAAACAGTGGACCAAGA
ATTGAGCCTTGAGGAACTCCTGCCTTGATTTGTTTCCACTCAGAGGTCTT
TCCATTCAAAACAACTCTCTGACACCTACTCGACAGAAAATTTCAAAAGG
GAAAGCAAGGGACCAGTTACCCCATAAGACTGGAGTTTATAGATTAAATC
TTCATTTCAGACTCGATCAAATGTCTTTGAGATATCAAGAAACACTCCCC
TCTTGTCCAAAGGTGGATCAGCGTCAAACCCTGTAAAGATGTCATGCGTT
ATGGACAACAACTGAGAGACACAAGTATCACTCTCCCAAAAACTGGCACG
GAGTAGAGAGATTGTTGCTTGCAAAATACTTGTAAAGTACATCGTAAATG
CACTTTTTAAATACTTTGCTAAACACTGGAGAGACACTGGTCTGTAGTTT
TTAGCAATGCTTTTCTCTCCCTTTTTATAAACAGGAACAACAGATAATAA
GATAATAAGAGATTTACCGCAAATCCTAACCATACGTGTAGAAATATTGT
CCTATCCATGAGCCTTGTTTCCGAGAAAAAAAAGGCTTTTCAAAATATTT
CAGAACAAATATCTTTCCCGGAGTCTAATTGTTCATGAGGCCACCAATTG
ATTTTCGTGAGGCCGTGATAGGGACTTTTTTCTGGCGTGATTACGTGATT
TGTAAATCTTTTCTTCGTGATTGCGTGATTAGAGGTCAAAACACGATCGT
GATTTGAAAGATTTTTGAGCCGTGATGCTCGCTTCGGACTTTTTCAAAGG
GATGCGTGTTATCCGAGTTTTTGCCGTTTTACGTGATCAGACTCATTCAT
CACGGGTGTGGTGAAGAAGGGATGAGATTTCGGGAAAAAATGCAGTGATT
CAATGAATGTTGCGGAAGAAGTGCGCGTTAACTCACCTATAGAATTCAAT
AGCAAATCCCAAGCATACCAAGTAGGTGCCCAAAGACAGACTGTAAACAA
TCCACAAAAGAATTCCCAAAATGTTTTCCAATGAATTTTCGACGCCATCT
CTTTGAACCGAAACAAAACCAAATGGTTCATAGAATGACAAAAAATGGCA
ATCAAAACAAGTCCTGGAATATCACTTGCGGTTTTAGTGAAAATAGATTC
TGTTGCAAAATCGAACAATTTCCATGTTGTGCTCCAGAAAAGCCCACCAA
AAATATGAAGGAAAACTTGTCGATGATGGATAGCATACAGCCAACCGAAA
AACTTGATCATGTATCTTTCTCTCAGTGTTACTATATTATCCCTCTGTAA
AAGATTTGGCACATGAGGTCTTTTGAGTGATGATGCTAATCGCTTTTTGG
GATGAGAAGGTTGTTCAACCTTGGTTGTTGTTGTATGTAGAGATTGATCG
GTTGCCATAGTGCTGGTCTTTATTTCATCATCTGATTGGTCCTTGGTTTC
CAAGGCAGCCAGTTCCTCATCCGAGCTAGAATCACTCTGCAAAGCTTCCA
ACGCTCTGACATTGACACGGATTCCACCACCAGGCATGGCGTCAAAAGGG
GATAAGTGGTTGCTCTTTCGCATTGCTTTATGGGTCTCTTGAGGTGCATC
GTGAGTTGTGGACATTTTTCTCGTAAGTGGTGCAGATCGAGGCGTCACAA
GGACGCTCGATATTTTACGACTTTTTTTTGTTTCCCTTGTATGCACTGAT
ATCTTTCTAGATGATTGAAGGGAGATTTTCTTTGATGACGTCACTTTAGT
CCCTTCTTCGAATTCCTGTTTTTCCAGTACAAGTTGGATCACCATTTTCC
ATGTGTTAACAGGATCAAAATTTTCACCTTCCTGTCGCAATGAAGATAGA
CTAGTACAAGACTGTTTGAACTTTTCTCGTAAACGGTTTCGTTGAAGTGC
ATTGATCAGTCGCGCGGTCGCAAATTCCACCACGTCAAAATCACCATCTG
ACAGACGGGAAGCTGAAAGGTTTGGTGTACCAGGTACATCAAGAAAGTTT
GGGTTTTGTATTGTCTCACAGAAATGTTCAAGCACTTCGGGTGCTTGATG
GCTTACTTCTGAAGGCTTCGGTTGACGAAAATTTCCGAAAAGATTCAAAA
AGAATAAATGATCTGTAAAATATAACTCATCGTATTTGTACATTTTGTGT
GTAGGGCAAAGATTGATGGCATTGTTTTTCTGTGTGAAAGCCAACGTCAA
GGCCACAAACATTTGTGCTACAACACAACTCAAGATGGGATTCACTGAAT
ACTTGGTGTGCAGCAAATCAATCAGGACTCCAAAAGTGGCGAACAAACCT
CTCCATATTTGTATGAAACCAATAACTAGGATATAGATACAGATCGGAAA
GGTCTTTTTGATGAGGCGAAATTTCAAACTCTTTTGTTGGTATACTCTCT
TGTATGTCACGATAGCTGTCGGGTATACTGACCGATGATGAGTTTCCCAA
AAGACGCTGAAAGTATCTTTGAATGCTACACGGAGAATCAAATACAAGAG
ATTGGCAAAAATGATGAGGCCATATCCACGTAGATAGGAGTAAAGACCAT
ATGTTTGTATGGGACGGTAAAAATCCGACAGCAGCCAGACGGACCACCAA
AAACCGATATCAGCACCTCCAATGTATATGTATTTCAACATCACCAATAA
ACGGTAATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024663TCONS_00024663Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000506supercontigsc0000506:173375..183533 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.06	0	0.03	0	0	3.25	0	5.85	2.13	5.78	7.6	0.05	0.05	0	0	0	0.03	0.32	0	0	0	0	0	0	0.11	0	0.22	0	0.06