XLOC_013890 (gene) - C. hemisphaerica

Overview
NameXLOC_013890
Unique NameXLOC_013890
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000509:168980..172735+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013890 ID=XLOC_013890|Name=XLOC_013890|organism=Clytia hemisphaerica|type=gene|length=3756bp|location=Sequence derived from alignment at sc0000509:168980..172735+ (Clytia hemisphaerica)
TGGAAGGTCACGCATTCGCTTTCAATTTCAACAGAGAATAAAAcgtaaat
aaataaacaaacaagatGGCGGGTACGTTCAAAGCTAGATCACAACATCC
CATGGGATCACTGAGAACATTATCAGGACTCATCATGATGGTCAATTTCG
TAAGTTCTTCACCCTCGACTATTCTTTATTGATGTTCTAAGTCACTTCGT
GTGAAAAGAATTAGaaatgcttaaaaaagcttaactaactGATAACAATT
TAATTTCGTAAAATATGGTAAATTCACCCCAGTAAAAAAAATCGTAGTGT
CTTTTTTCCGTTAAAATAGCAATTCGTGATCTAATAACATCACCACTAAA
ATATTTCTCCAAATGCAATGACAAATTCCTTACCCTCTCTTTTAGCTTCT
CCTCTTGATGTCGGCGCTCATTTCACTAACATGGCGTACGAACGCGCGAC
ATTACCCTGAACGATATTTCGACGATTTAAAAGACAAATGGGCGTACCAC
ATTGCAGCATTGGCGGTACCAGTGGGCGGCTATCTTCTTATTCAATTCAT
TTCGACGTGTTGTTgtgattgcaaaaattttcgaggATTGGCGGATATTT
TGGTAAGTCAGGAGACGATGCATATTGGGTACTCTGGGATGTCTAATAAA
AGGGAAAATGGGGGCTTTTTTGATGGCCGGACTGGATGGCACGATGAAAT
AACTTGGGAGTACAGTATAAAACATGTATCAATGAGATCGTTTAAATGCT
ATAAATCTGGCCAGGTTGTTGGCGCACCACCTTGAATCTTTCTTATCCAG
ACATTTTGCATGCATATTAAATGATCTTTTGAGCGCagtgattggctaaa
gcaaaacaatggcACCAAAATCAAAAACCAATCCATAGTATTGAGGCCAA
TCGTAACCATAagattagaacccagtcgctttcaatttcgatttcaaGTA
AAAAGCAAcgcggttttaaatgttttggctgaacaaTCTGGTCAGATCAT
CACATTCGCCATTTCCCTTTCTCTCTAGATGATGTTGCTTTGTTTGGTGT
TTGGCGCCTTAATCATCGTCAGCGGAGTTTTTCTACAAATGGCGCTCCAT
GATAGAGACTGCTTCCAACAACGAAATTGTCAACAACTCAGGGCATCTAT
TGTGAGTCATTAAATTATTACGTCCAAAATATTAATTAATCATTTGACCA
CGTCTTAAGCGTATATATTTTCGCGGGTACTAAATTTTCGCTTGTACTTA
ATTTTGCGTGTTTTAAGGCAAAATTTCGCTTAATAAACacgaaaaatttt
cgaaatagaAGAGAGAATTAATTTTTTAAGGGATCAGTgatattttgtta
caatttgGATACTATTTTTGCATGTAATATTGTGTGCTTCAAGTGAAATA
agtatttttcttgttttgaccattttcttGAAAGATATCCAATTAAGTGG
ATCTCGAAATTTAATTTTAACACACGCAAAAATTTCCAGGAAGTAGCGAT
CACAAATTTAGTActaaaaaatttcacaattcGTGAAAGCTTAGTACCTG
CGAAAATATATACATTTAAGGTAGAATGCTCTTAGAATTGGTTTAGTTTG
ATCTGCCATTCAGGCTAGTTCACCGAAAAAAGATTGACAGACTAGAAAAA
CAAGCCTATTCGCTCTCCGTTGGGAACGTTTacttgggacaagctggagt
ttttacaagctcttatttgatttggttggtcgttaagatgtaataaaaga
atcttattacatTTTCTAGAGAACGCGTCatttctatcactttaaataac
caattagtgaagtatcttgtaaaaactccagctcatcccttaGATTGATC
ATAGCGAGTAACTTCAGCCTTGCTAAAATGTCGTTTTTCATTTTAGATAA
TTGGTTACGTATCGTCGGCTTTTCTTTTTGCAGAATCTTTCTTCCATTTA
TCAGAGAAAAACATCGTAATGAACGTCGTATGATATCTGTTCGCTTCCGC
TAAGCGTGCACAAAATGAGAGGCTCAAAAAAGAGGTGTTTTCTATTTCCT
TCAGAGGCAGTGAAAGGGTGCTGAGTATGTGCGCGTGCCTAAAGGATCGA
ATTTTTCACTTTGTCAAAGCAAAATCTTTCGTCAGAGACGTAAAATGCAT
TTCACACAGCAAATGAGCGTATATTCTAGAAATGTTGGTGAATTATACAG
AATTTCGAAACGGAAGAGACCGTCTCACTGGATCGGAAAAGCTTCACTCT
GTCCGTAAGGGTTAACAGAACGGGCAAAAGTAGTATCTCttccgtttttt
ttttgctttagcaAGTCAAAAATGACACATCTTCAAGAAAAGGATTTTTT
TAATAGTAGAAATCCTCCAAGaaagttttgtgaaaaagtctctGGTCAGG
GAGATTCGGCACGTACATTAACATCCCCATCCCGTTAATCCCCGGGTAAT
TCTCACGTTTGTGaactttgaattttcttttcgcGAAAGGGAACAGATAT
TTCACTCGAGTGCTCATGCTTTCTGATGAATGGATGTCACGCTCAGCCCT
GGTTTGAAAAAAGAACACTTTGGATGACAATCGAATTTTTTGCaggacaa
aaaaaaaacattttttataattaGTTGATTTATATGTACATTAATTATTA
TTATCGCTGTTGATATAAAGCTGAATACAAAACTATTTCacaaagtttga
aaatgaaaatgttacgTGTCAAAAGCCGGACTTTGAAAAGCCAGAGGACC
TGGCTGCTCTGACCTTCTACGTTGTTGACGAGAGAGCCAGATAACGCCTC
TTCTAGCAGCATTACAAAAATATCAGGTtttaaattgatgaaaaaaaacc
TAATGAGCACCGCACCCAAAAAGCTTGAGATTCTGTAGCCATAATGGATC
ATTCTATAtcttcgtccaccctcactttaaggatgaaaattttttccaag
gtttctttgtaaattttgccattttccaggaggtaaccacacattttcaa
aaattatttttttcttgaaaaggttCATATTGATTTTAAATGGAACAACC
CAATACACGTCAAATCAGATGTTTTCCGTAGGAGTTTTTAATAAGGAAAG
TAAAACAAAACCATTGAGATTGGAtcaatttttagcatgaaaAGTGGCAA
AGAAACGAAACCATGACAGTAAAAATAGCGTTGTTTGGTAGAACTCAAGG
GGTTTGCCCTCAAAAGATCGCCCCACCTAAAACCTTGAAAATATAATGAC
CTTATTTGAGGAAACACGTTAAgcagtttataaaaaaataatcatcaaGA
GTTTTGTTCCAATGCACTCCTCTTCTAAGTCGAACGTTAAAACCGCACTT
AACCCTATTTTCTAGTAGTTCaacttttgccaaaaaaaatgtTGACTGAT
TTTTCGTAACCATGTAGGCACAGTAAACGAGGTAATAAAAGTCACTGTAT
GAAAACAGGGGCTAAAGTAACCTACCATTAAATTTCTAGTATCACCTCTC
TAATCAAACCCAAACACTGCTTTTCTTTTGACCACTAAACAATAAAAAGT
AAAGTTTAAGTTTGTCTCGCTTTCCCAGCTAGCGTCATATCTTTCACCTC
AGTAGTCTGGCTGAACAAGTCCAACGTGACGGCCGACAAAAATGCCGGGA
TCGAATCTCCTTTTTGAATATAGTCGTTGAACAAGGGACGCCATTCCCGG
GCGTATTCCGTCTCTGCCATCCCTGCTTCGGTCACGCCCTCTTTGTTTTT
GGCACA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00024733TCONS_00024733Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00024733-proteinTCONS_00024733-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000509supercontigsc0000509:168980..172735 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.44	0.32	0.17	0.13	0.56	0.54	1.43	0.95	1.57	3.72	2.51	1.53	15.44	13.71	8.24	10.26	7.72	8.84	18.12	23.66	8.01	9.8	6.09	8.8	8.13	12.45	13.49	16.46	33.41	33.3