XLOC_014250 (gene) - C. hemisphaerica

Overview
NameXLOC_014250
Unique NameXLOC_014250
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000533:63241..68282+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014250 ID=XLOC_014250|Name=XLOC_014250|organism=Clytia hemisphaerica|type=gene|length=5042bp|location=Sequence derived from alignment at sc0000533:63241..68282+ (Clytia hemisphaerica)
tctttttttataaattcataatggtAGATGAAGCTGCAATGAGAAATCGC ATCCGATAACAAACTCAAATTTGCAGTCACAGAACTGCAAATGATTCAAG CAAACGGAACCCGCTGAAATGACTCGAATTGCAACtattaaaggcaaaaa taaatcatGCTACTAATTGTGTTATTTATTTCCTTTCTTACTGAAGAGAC ACTGGCCCAACAAGGAATACtgggtatgactttttttgcatttattttta TACCAAAAGTATCCCCCCCCCCACCACCAGCACCATCAACAATAAAATTC TGAACAGCATGCTCCAACTGGAAATAGAAATTAGTTCTAAGGAAATTCGG TGACCTGGAAAGTGTTGATCTGTTTCTAGTTAGGTGAAAACCTTGTTTTT TGCACAGGTTGGGTATTAAACGTATATCATTCTTCAGCCAGCACGTCAGC CAGCCAGAGCCAGGCAGGCAGGATTTGTATATACCAGGatgtaccgtgaa gtcgggtaacttgcatcagtagagggaaacttgcatagccatcaaatgac tgaccaatcaaagcagcaaaatttcaaaacaaatgaactacacagCTCTG CTCGCAGTTTTTGCTCTcttctctaccatttttgttttaatttaatttgt attttaatgaccagccagatcattcatttgagggctatgcatgtctGCCT CCACTGATGggagttacctgatctcacggtaaGTCAAATCTTTCAACCTG CGCTGCGGACTTAGACAAGAGTTTGGTTactatcagttagggttagggtt gcgTTGGAGGTTTTAAAAGGTCTGTAATCATCAGTTAGTTTTAGTGTCGT ATCTTATCTTCTTGTTATGACAAACTATTTATGCATGAGTTAGGGTGCTA GGGTTTGTAGTAAACGAaagttgcttgcatttggtggtatGTAGCCAGTA AAAGTTTCCTGATTAggaaattatttctttaaaaggaaattctactttaa ttggattattttttctcgagattaaattttgcaattttaaaatttttgtc attttcccGAAATTAAAACTCACAAAAATGTGTGAAATTTCCaactcgca aaattaaattcatcacaaaacttttttaaatcgcATTTTCGGCGGAGAAA CCAGTCCAAATCACcgatcagttagtcacactagcgtcccgccaaaatgc atatcaaagattaatgctgcaaaagcgctatatcgtttacttgactcctc aagcaaaaaaatgtgctgcaaaacttctaaataacccagcgctttttaat gaaattaacattttcaaaatctttgagaaattgcctaaaatttgagccat agatgaaaaattttgagccaagccaaccttgaaaactaatttgaagatca acttcccaagaaaaagatactacgggggaggcggaacccacctagatccg cgcaccaccaCAATTTTACCGGACCttaaacaatgacccatttacatgtg caggaatatttttactttagcgtataaacaaggccttaaaaatcgaagcg ctgtctcgggaattgaatgacaaattttggttggttgattttggctgctg cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNcaagttttaattaattgtcttgcgaacttgattcaggtaactct catccttgttgtgcaaatgcatcctgtagatgactgatgttgttttttct gaaagttagatttcctagtgtgactaactgccaatTGTGGCAAAAAAGGG CTTCTTTTCTAGTGTTTTACCAAACTTTCAGTCTCAGGAAGGGCAGTGTT CGATTGGACGAACTGAATTGATCAAATTGGGCGCTAAAAGGGTATGAAAA ATTGCCTGTTCAAGCCAGGGTGGAAGACCTATTTTGTGTACCGTAAGTta gtctaatgttgacatccctcttctaatttccaCATCCTGCTTattaagag aaagaaaaaatagaaaggtCAGAATGAAcagtttcaaaaattgtgtggCA TTTTTTAGAAcacaaaaaatggacaaaattcttaaaagttgaataaaatc tactcaaattaattacaagccttaaaattttgacaggtaataggaaattt tatcagcttttcaaaaatatatttatgatGTCATTCTTTGTGACAATAAA TGACTTACTAAATGAATTACCCTATTATGTTCAAAGTATGTCACTCTCTG TCACAATCAActgttgaaaataatttaaacatAAATCCATGTTTTCATAC CTCCTATATCATCCAGTAGTTAAATATGAACAACTTTTGGTGTTGATTAT GTCAAGAAATGACTTACTTTATGGGTAAAAGAACTGAAATATGTCATCCT TAAAGTAAGTCATTTTTTGTCACACTTTACTTCTGGGTATAACTTGAGAT ATAGTAAGTCAatttaagtaaaaaataatgCATTATTTAGGGGATATATC TGGCTTAACCATATCAAAAATATAGACATTATTCACAATGTGCTCTGTTT CTATGAGAAAGTTTTGTGTGAGCCTTCAAAAATGTCACACACCCAGCACT GAATTTTTGAAACTGTTTGAATCACTGATGCACTCCTCAACTGAATGTTA AGCAAAGaaaaccttcctattattcctatctctaaagaagagtgatattg acattagaccaacctGGACCAACTTATGGTAGTCTATTGGGAGAATGCga atcttttgaataactaattacgccagcagaatttttttaaataaggcgag gccaatttaattgtTGTTTTATTTGCCAAACCAACCAAAAAGAGAGTTAG CATTTCActtataaaatctcctaaaagcCACATTCGTCATAGCAAAAACT ACTGCATCATGACatgtgaaataaaaaataaaaagacacaaaaagcttgA ATTCATGGAtacaatgaaaattgaacataaaattctcaaaactttgcaaa aattaCTTTTCGTTCTCCCAAAAGACTATTTCACAGGTATGAGAAGATTT TAGAAAACAGCTAGAAACATTCCAGGCAGCCATATAGAAGATTAAATAGA GACCCATCATGAAGAAGTAGAAAATTTTCTGgccatttataatcaaataa aatgATCTTATCAAAAAAATCGTTTTAACTCCTATAATGAAGATTTAgat taaaaagatattttacataCTATATACATCCCCTTAAGAAAGTTCAGTTT CCCTGCTTTGTTTAACATATAGAATTGAATGATCtgcaatcatggtcaaa ataatTGAGAATCCTGAtattcaagatttaaagttccggcgagaaagttg attttgggcttcctttctctttaatttaatcaaagttttcaatttGGGAT GGGTTGGCAGACTTTAAGGCCATATTATGAGACTTATTGGACTGTTTTTG AAGGtcctaagtctagcgttaaaacttgATCCTTCAAACCTACtgtagag cacttacaaatcgaNTGGACTGTTTTTGAAGGtcctaagtctagcgttaa aactctatccttcaaacctactttagagcacttacaaatcgattgtggtt tcaaaacttcctggggaatttcccttttttctcaaatattatttttaccT TGATTGTGCTCTATCAAAAATGTTGCTCAAATCGAATACATCAACATTCT TTTATGTTGAAATAGTCGGCTAATAGTAATAACAAACAACCTTCCTTTTT GAAAGCCATTGGATGTTGATATTAAATTAATTGgtgtaccttaagtggat agaTTTTCGCACGCGTGTACTAATTTTCACGAGATgagaatttaaagatt tcgcgtggattaaattttgcgaaaaatggccttctttatttaattCCGCG ACTATACAAATTGTAACTAAAAAAGAGATGTgtgttttttaatcgaacaa agACAGACactcaaaagctttcaaaaaacttcaaagaaagtACTTTTAGG AGGTTACTAGAGTTTATAATTGAAATGAAGAGTTGAACTAGTAATATGTT TTGATTCTAACAtgtttgatttctttctttgattttgcgaactttttttt tcttcaaaatttttgcatggactaaatttcgtgaaaatggcCATAATttg cgaaaaccgcgaaaattaatccacgcgaaaatttatccacttaaagCAGT ATTGAAGCTTTTCAAAGATGATTCCCCttttactttaatcgtagaaattt tagcgagactaattttagcgtatatttagcgagtcaggaaaatcttgatt ttttttttatttattttggcgaatcacgatttcaaaaaatttcgcgtgga taaattttagggaatactcgtattacattattgactgaattcgttttcta gcatttctttgcactgaaacccttcttattgataaaaatgtatcaaggca atataaccagaaattttgcgcggataaattttagcgatctgtcgattcgg cgtgttttagcgagatttattttagcgaaagtAGGGAAAACttgctaaaa cgctaaaattagtctcgctaaaatttctacgattaaagtatatgATTTAG CATGGCTTGTTTTGAATAATATTGATATTATATATTTCCAATTAGATTTT ACCATCCAGCCACAGGACAGAATCATCATTTTGGGAACAAGAAATGTGTC CATTCCATGCAATGCTACAAGCAATTCAACAAGTGGAACAATTATTATTC TTTGGAAGCATAACCAAACAACGATAACCGATTATACCAATAAACATTTT ATGAAAGACCAAAATGGGTCTATTGTTTTTGAGCAATTTCTACAAAGAGA TGTTGGTACATTTCAATGTGTTGCTATTCTTTaccatgaaaatattaaac aaaaGCAAATAGAAAGCCGCGTAGCAAGAATTCAAGCTGCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025377TCONS_00025377Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025377-proteinTCONS_00025377-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000533supercontigsc0000533:63241..68282 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.71 2 1.42 1.64 85.53 62.24 29.19 35.56 16.92 21.08 14.91 16.33 2.43 2.44 2.01 4.73 0.94 1.76 1.21 1.65 1.32 2.74 1.96 5.23 7.47 9.84 2.82 2.5 2.41 3.1