XLOC_014339 (gene) - C. hemisphaerica

Overview
NameXLOC_014339
Unique NameXLOC_014339
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000539:769..6026+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014339 ID=XLOC_014339|Name=XLOC_014339|organism=Clytia hemisphaerica|type=gene|length=5258bp|location=Sequence derived from alignment at sc0000539:769..6026+ (Clytia hemisphaerica)
cgttcacgcaagttttttcaattcacgcattcacaaaattttttttcaat tttcacacaTTCACGCAACCAAAAAAGCCCATTCACACATTCACGCAGAC CGCTGGGGGAGCCCTCTAATAGCAGCTCTGTCAGAGGCGTAGCCAGGAGT TGAAGGGTATGTTTTTTCATTGCAGATAATAAACGAGCTGCTGAAGCTAC ACTCCCAAAAGTGGATATCTTTATTGAAAAAGCCATTGATGGAAAAAGGG CTAGAAAGAAGAAATCAGAAAACATGTACGAATATGGTAAGATTATTTGA GATGTGCAATAGAAATAAAGAGATTAGCAGGGAAAAATCTTAATAAAAAG ATTTTGTGCTATGTGTTATGACTCAAATTTTCTTTTAAGCTGGACTTCAG TGTTGCATTTGCTCCTGCACTTTTTATTTCTTTTTTTCTACTCAGATGAT GAGGACGAGTCAGCGAAAGAAAAAAAACAGAAATTAGTAAGAAAATATTC TTCAATAGAAATTATGTTAACGTACAAATTATTGAATTTCATGCCAAGAT TCATTTTCTGAAACTAAGGTAAGTCCCAGTAAATTTGCTATTTTTGTGAT CAATATCAGGGTTTTCAGGTCCATATATATGATCTCATTATGATATCCAT AATAATTGTTTCCAAAATTAAGTAATCATGATCACAATCCTTCTTGAATA TTTAGATTTTTTAATTTTCGCTCAAGCCAAATTTCTGTTTTTACGCGTCT ATATTTTAATAATAGCATCTTTTTTATCACAGAGTGAGAATAAAGAAAAT AACACTGGAATTCTGAAGACTGTTACAAGCAAAAAGAAAAATGTAAGAAA ACAAGCTTAAATTTTGTTTTGTTTAAGAAATGAATTAATAGCAGACCTAT GGCCATGAACAAAGCCTGCATGTGCTAAAGTAGCACTCTATGAAAAATAT ATAACAGATTATGACGTGCTATTAGCACTCCTAAAGAGGGTTTTGTTCAA ACTTGTATATTTTAGGAGTGATATTTTAGCAGTTGCAAATCATTTTACGT GTGTGTCAGCGTGTGCGAGAGCATGCCAGGTCAGGCCTGTAATAGAAATA TACTGATGAACAGTAAGATTTTTATACTTAATAAATTTATGAAACCCACA TTTTGCACTTCATAGTTTCAAATCATTCATTCATTTTTTCTAGGGCAATC AACAAGTATCAGTGAAAGCAGATGATAAACTTGGAAAGAAAAAAAAGGTA ACATTGTAAAACTACATTCAGAGTTTGGTATAAAAAAACAAAACACCAGT TTTGAATTATTGAAGCAGTCATTCATTTATTTCCATTTTACAAGGTGAAC GTTAATGCAGATGCTCAGAAAGCAACACACCAAGATTTTATGACTGAAAT AAAAACAGTAAATACATTTTGTAAATTATCTTTGTATAGCTCAGGTTTTG TTCAAACTTTTATAGTTGAAAGTAGCCTCTTTTTTGAGTTTTCTCCCCTT TTTTTATAGCATAAAAAGGTATTTTGTTTCTTCGAATAAGGGAATTATAC TTGAACAATAGATGTATTTTGTTTTTGATTGGAATTTATCCTAAAGGTTT GTTTTTTTTACTTAAAGATATGCATGATTAAAGGACTAGGAGTTTACTTT TTTTTACAGATGAAAGAAAAATTGAATGCTGCTAAAATACCAATCGAACA AACCAGTGAGTTTTACTATTTGTTTTGAAAGTGCAGTTGATGCTCTCTGA TTCGATCTTTAAGGGGaattaataaaaatatactttGTCAGATGGTTTTA AACTCAAAACTGCTTGAAGGTTTTCTATATGAATATTATATACACAAGTA TGTAACAAATGCATCCAAAAAACTTTACACAACAGTGCATTCACAAGATG ATAGACAATTAGTATGCATgagttaccttaagggaataaattaatgcgag aaTTAATTTATGCGGAATAAGTTAATGCGAGTAACCCCCAAAAAATTATA TGTTTTGCGGAACAAATTAATGCGAAAAGGCCCATTTTAAGGAGTTTTGC GGAATTAGTTTGGGCGCTTTTTAAGTAAGAGAATAATGTCAAATATGGGA ATACAAGTGCTTAATTTATGCACTGGAGTCCAAAAAATGAATATTTGGGA TTTACACCTCCAAAAtcagcaatattttagaaaaaaatgcgGAATTTATT AATGCGAATGGCGAATGGccgaaattttttaatttttgcggaatttcaaA TTTGCATTAATTAATTCCGTATTAATtcattcccttaaggtaacatATAA CAATAAAATAATACAATAACATAACATGACATCACTATGACAACATTGAG ACACTTTCAAAACATGACAATTGACAATGCTACCGACAACTTAATACATC ACAACAAAAACGTGCAATTTACAGACCAACATTTAACATTGATAATTTAC AGAATAAAGTCACAATATATAAACAAATGCTACTATAATGTACTAGACTT AATTAATGATGGCTTGGATACTGAAAAGACGTGCAAaagctgcaaacaaa aaaagagACTGGAAACAAAGGAAAACACTGACCAAACAGAAAAACACTGA CCAAACAGAAAAACACTGACCATACAGAAAAACACTGACCATACAGAAAA ACACTGACCAAATAGAAAAACACAGAAAGAgctgaaaaccccaaaaatag gGAAAACCCCATACATCCTGAGGAGAACCATAACAGTCACTGTGTCTCAG CCACtacaaaaatagctatttcNctgaaaaccccaaaaataggGAAAACC CCAAACATCCTGAGGAGAACCATAACAGTCACTGTGTCTCAGCCACTACA AAAATAGCTATTTTTTTTAAGGTGTTAACTCTGATACAGAAAACGACGAG GAGCTACTGAATGTCAGCACATTGTCTCCCAACAAAGTGTCATGTGAGAG TAGCGATCATGTAGCTGAACCTGCCTCACCAAAGAGAACGACAATGACTA GACAGACACAAGGTCATGAAAAGGTACAACATAACCTGATACCTTCGATG ACCAAAAGTCCTGAAAAGACAAACAATACCATTCTACAGCCCATTCGAAG GACTTCGCCAAGAAAAAAAGCCCATAATAGCCTACAGACACTATCTTTTC TATCATTGACCAAAGGTCCTGAAAAGGCACAACATAACCTGATACCTTCG ATGACCAAAAGTCCTGAAAAGACAAACTTTACCACTCTACAGCCCATTCA AAGGACTTCGCCAAGAAAAAAAGCCCATAATAGCCTACCAAGGCCTTCAA TTAACTTAAATAATTTTGAACAACAACCTTGGCAACAGCAAACACAAAAG CAAGTTACAAACAGCACTCCAACGTCTAATAATTTTTTGGGAATAAACCC ACTTGGTTTTTTAGAGAGTAGTACCAGTAGTACTGGGTCTCCTGGCTTTG TTAATGAATTAAACAACAATTATGGATATTGGAATAATTCAAATAACAAT ACACCATCAAATTCTGTTACCAATAACCAAAGAATGTATAATTCTCAATC CTTGACATCTTTGTGCGAGATTGTCAACGGTCTTCAAGCAAGGGTCAAGG CTCTTGAAGATGAAAATTCAAACCTGAAGACAGTTGTACATATGTTGATG GAGAAAAGCCAAAACGATAACAGACCAAATGTAAATAGCCACTTTAATCT TGTTATTTTGTTacatttgtctcaaaatctcaaaaaattttcccataTTG CACTTGGTAATGTGTaacaattattgttatttaagAATCCTGATCAAGAA GTAGATGGACATTACGGCCAACTGTCAAAGGAGCAAATTGTAAgttttaa aaaacataaaattatttcacagcaaattttacaatttggAAATAGTTGAT AGTCAACATTAACATAATTATTATTGACATTTACAGAAATGTTTCTAATT ATAACGTTTTTAACAAATCTTTGTCAACTTGTCATTctatttatttagaa aaaagtcaaagagATTGGTAAAACTTGTGTGAATTACAAGGGTGGAATAA ACCGGATGATGGATGTTGTGTTCACTGAACAAGAAATGATTTCTTGTACA CCTTGTGGTCAGGCaagtcaaaaaaataaagaggCGAGAGGGGCATTACC ATCTGATGGAATGAATATAATTTATAGTAAgagtagtttttttttaattt gagtgaagatctgtttttttttaagcacAAGAAAGATATGATTTTGTGAA TTAGAATAACTTGAATAAACACACATCACTTTATATGGCTTCCTGANTTT AAGCACAAGAAAGATATGATTTTGTGAATTAGAATAACTTGAATAAACAC ACACCACTTTATATGGCTTCCTGTgtgtatctttttttttaatttagcaa CTAGAATATCTGTTGGACAGCGcaatttctatttatttttggCCTTACTC CTGCTTACTCTTGTGCTTTTGTGTAGATTATAATAAAGATTGTTATATTA TATTAATTCAAAGACTTTATTTATAGAATACATCAGAAAAAGATTTCCTG ACGAATTTCCGGATGGGGAAAATAATTCCAAAATGCACAGTCAGATGACA AATCATTTGAAGGTTGTGGTTAGAGCCTTCAATTCAAGAATGAGGccgtc aaaaaattgagaattattttcagttgttttttgagctattttcattttta ggttTACACTGTTCTTTTGGTATGACAtaagtaaattttgaaaatttaag agCTCTTGTGAAAAAATGATTCTTAAAACTATATTACTCTACCAGAGACt actttttcttattattttaatCATTAGAAGCCTATTCCTGCCACCCAATA TTCATTTTGTTACTGCAGAGTTATCTATTCTATATataaacttttcaatt tcacaaCGTTTTAACTGGTCAATGTaatatttaaaaattacaatCACCCA ACATGATACAGTAATATTTTATATTTCCTATTTTATTGATGAAAAACCCT TACTATAGGTCCATTTTGCTGTAAATATTTTGTTCTACATCTTGTTTTTA GTACTCACTTTTTGATTGCCCTtatatttctttatatttttttattctat acatatttctttcactttcattctcttgttatatatttttcctattttaa tttttataactATTTCTTTTATCTATTTAgaattgttttttaattttagc atCATATCTGttttaacaaacttttaaaGAATCTGGTACTAGTATTTTGT TGCTTTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025531TCONS_00025531Clytia hemisphaericatranscript
TCONS_00025532TCONS_00025532Clytia hemisphaericatranscript
TCONS_00025533TCONS_00025533Clytia hemisphaericatranscript
TCONS_00025534TCONS_00025534Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025531-proteinTCONS_00025531-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000539supercontigsc0000539:769..6026 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.23 0.19 0.24 0.15 22.2 17.96 18.01 20 8.14 10.15 7.12 6.87 8.5 7.05 0.14 0.11 0.16 0.1 0.14 0.06 0.15 0.34 0.06 0.12 7.09 8.81 0.27 0.18 0.23 0.28